Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410172
Identifier: 41410172
GI number: 41410172
Start: 4540713
End: 4541336
Strand: Direct
Name: 41410172
Synonym: MAP4074
Alternate gene names: NA
Gene position: 4540713-4541336 (Clockwise)
Preceding gene: 41410171
Following gene: 41410174
Centisome position: 94.01
GC content: 68.11
Gene sequence:
>624_bases GTGGGCTGGTTCCGCTTCTACTTCGAGGGCGAACGCTGGGTGTGGTCCGACCAGGTGCAGCGGATGCACGGCTACCAACC CGGCACCGTCACCCCCACCACCGAACTGGTGCTGTCGCACAAGCATCCGGCCGATCGCCCGCAGGTGATCGACGGCATCA ACGACATGATCCGGCGCCGGCAGGCGTTCAGCACCCGGCACCGCATCGTGGACACCGCCGGCATCATCCACCACGTCGTC GTGGTGGGCGACCAGCTCTTCGACGACAGCGGCGAGCTCGTCGGCACCCACGGCTTCTACATCGAAGTCACCCCGGCCGC CACCCGCAACCGCGAGGACTCGATCAGCGCCAAGGTCTCCGAGATCGCCGGGCGGCGCGGCGTCATCGACCGCACCAAGG GGATGCTGATGCTGGTCTACGGCATCGACGAGGACGCGGCGTTCAACATGCTCAAATCGCTGTCCCAGCACGGCAACATC AAGCTGTCGGTGCTGGCGCAACGCATCGCCGAAGACTTTACCGCGCTGGGCAAGGAGGTCATCACCGCGCGCTCGCGGTT CGACCAGCGACTGCGCACCGCCCACCTGCGCCCGCCCGGCGCCGGCGAGGCCGGCTCCGGCTGA
Upstream 100 bases:
>100_bases GCGCCGCCGCTCTCGACCCGAAATGTCCGCCGTGGCTTGGAATCTAGACGGGCAGGCCGCGGCGCTGGAGCGGGGCCTGG CCGGCGCCACCCCGCAGCGG
Downstream 100 bases:
>100_bases ACGCCGCCGCCGTCAGCCCGTGATGGTGGTCTGCTCGTCGATGATGTGGGTGGCGTCCATCAACGGGCCCTGGTCGCTCT CCAGCCCGTCGGCGTTGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MGWFRFYFEGERWVWSDQVQRMHGYQPGTVTPTTELVLSHKHPADRPQVIDGINDMIRRRQAFSTRHRIVDTAGIIHHVV VVGDQLFDDSGELVGTHGFYIEVTPAATRNREDSISAKVSEIAGRRGVIDRTKGMLMLVYGIDEDAAFNMLKSLSQHGNI KLSVLAQRIAEDFTALGKEVITARSRFDQRLRTAHLRPPGAGEAGSG
Sequences:
>Translated_207_residues MGWFRFYFEGERWVWSDQVQRMHGYQPGTVTPTTELVLSHKHPADRPQVIDGINDMIRRRQAFSTRHRIVDTAGIIHHVV VVGDQLFDDSGELVGTHGFYIEVTPAATRNREDSISAKVSEIAGRRGVIDRTKGMLMLVYGIDEDAAFNMLKSLSQHGNI KLSVLAQRIAEDFTALGKEVITARSRFDQRLRTAHLRPPGAGEAGSG >Mature_206_residues GWFRFYFEGERWVWSDQVQRMHGYQPGTVTPTTELVLSHKHPADRPQVIDGINDMIRRRQAFSTRHRIVDTAGIIHHVVV VGDQLFDDSGELVGTHGFYIEVTPAATRNREDSISAKVSEIAGRRGVIDRTKGMLMLVYGIDEDAAFNMLKSLSQHGNIK LSVLAQRIAEDFTALGKEVITARSRFDQRLRTAHLRPPGAGEAGSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23168; Mature: 23036
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: PS50921 ANTAR ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWFRFYFEGERWVWSDQVQRMHGYQPGTVTPTTELVLSHKHPADRPQVIDGINDMIRRR CCEEEEEEECCEEEHHHHHHHHHCCCCCCCCCHHHHEEECCCCCCCCHHHHHHHHHHHHH QAFSTRHRIVDTAGIIHHVVVVGDQLFDDSGELVGTHGFYIEVTPAATRNREDSISAKVS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEECCCCCCCCCHHHHHHHH EIAGRRGVIDRTKGMLMLVYGIDEDAAFNMLKSLSQHGNIKLSVLAQRIAEDFTALGKEV HHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHH ITARSRFDQRLRTAHLRPPGAGEAGSG HHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure GWFRFYFEGERWVWSDQVQRMHGYQPGTVTPTTELVLSHKHPADRPQVIDGINDMIRRR CEEEEEEECCEEEHHHHHHHHHCCCCCCCCCHHHHEEECCCCCCCCHHHHHHHHHHHHH QAFSTRHRIVDTAGIIHHVVVVGDQLFDDSGELVGTHGFYIEVTPAATRNREDSISAKVS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEECCCCCCCCCHHHHHHHH EIAGRRGVIDRTKGMLMLVYGIDEDAAFNMLKSLSQHGNIKLSVLAQRIAEDFTALGKEV HHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHH ITARSRFDQRLRTAHLRPPGAGEAGSG HHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2447183; 11234002 [H]