Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410176
Identifier: 41410176
GI number: 41410176
Start: 4547422
End: 4548384
Strand: Direct
Name: 41410176
Synonym: MAP4078
Alternate gene names: NA
Gene position: 4547422-4548384 (Clockwise)
Preceding gene: 41410174
Following gene: 41410177
Centisome position: 94.15
GC content: 72.48
Gene sequence:
>963_bases GTGCCCCGGACCGACGACGACAGCTGGGAGATCACCGAGAGCGTGGGGGCGACCGCGCTCGGGGTGGCCGCCGCCCGCGC CGCCGAGACCGAGAGCGAGAACCCGCTGATCAGCGACCCGTTCGCGCGGGTGTTCCTGGACGCCGCCGGCGACGGCATGT GGAACTGGTTCGCCGCGCCCAACCTGCCCGCCCAGATCGCCGAGGCCGAACCCGACCTCAAGCCGCGGATGCAGGGCATG GTCGACTACATGGCCGCGCGGACGGCGTTCTTCGACAACTTCTTCCTCGCGGCGACCCACGCGGGCGTCCGTCAGGTGGT GATTCTGGCGGCGGGCCTGGACTCCCGGGCGTGGCGGCTGCCGTTCGAAGACGGCACGACGGTCTACGAACTGGACCAGC CGCGGGTGCTGGAGTTCAAGGCGACGACGCTCGCCGAGCACGGGGCCCGGCCGACCTGCCACCTGGTCAGCGTCCCGGTG GACCTGCGCCACGACTGGCCGGCCGCCTTGCGCCAGGCCGGATTCGATGCGCACGCGCCCAGCGCGTGGTCGGCCGAGGG CCTGTTGCCGTTCCTGCCGGCGGCCGCCCAGCAGCTGTTGTTCGAGCGGGTGCAGACCCTCGCCGCGCCGGGCAGCCGGA TCGCGGTGGAGGCGCCCGGCCCCGACTTCATCGACGAGGCCGCCCGCGAGCGGCAGCGCCAGACCATGCAGCGGGTGCGC GACCTGATGGCCGACCTGGAGCCCGACCGCGACATCCCCGACGTGCAAGACCTCTGGTACTTCGAGGAACGCGAGGACGT GGGCGACTGGCTGGGCCGGCACGGCTGGGACGTGACGGTCACCCCGGCGCCCGAACTGATGGCCCGCTACGACCGCAGAC CACCGCACGACATCGAAGACGCCATACCGCAGACGCGGTTCGTGGCGGCGCAACGCACGGAAAGGACCCGACCCGACCGA TGA
Upstream 100 bases:
>100_bases ACAAGTTAACTCAATCCCCGCTTGGTTGACAGCTCCCACTCATGCAGCGCGCGTAGGGTCGTATAGGTAGCCGAGCTAGC GAAGTGGGGAGGAGGCGCAC
Downstream 100 bases:
>100_bases GCACAGCCCGGAGCGACGACGACAGCTGGGAGATCACCGAAAGCGTGGGGGCGACCGCGCTGGGGGTGGCCTCGGCCCGC GCCGCGGAGACTCGCAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MPRTDDDSWEITESVGATALGVAAARAAETESENPLISDPFARVFLDAAGDGMWNWFAAPNLPAQIAEAEPDLKPRMQGM VDYMAARTAFFDNFFLAATHAGVRQVVILAAGLDSRAWRLPFEDGTTVYELDQPRVLEFKATTLAEHGARPTCHLVSVPV DLRHDWPAALRQAGFDAHAPSAWSAEGLLPFLPAAAQQLLFERVQTLAAPGSRIAVEAPGPDFIDEAARERQRQTMQRVR DLMADLEPDRDIPDVQDLWYFEEREDVGDWLGRHGWDVTVTPAPELMARYDRRPPHDIEDAIPQTRFVAAQRTERTRPDR
Sequences:
>Translated_320_residues MPRTDDDSWEITESVGATALGVAAARAAETESENPLISDPFARVFLDAAGDGMWNWFAAPNLPAQIAEAEPDLKPRMQGM VDYMAARTAFFDNFFLAATHAGVRQVVILAAGLDSRAWRLPFEDGTTVYELDQPRVLEFKATTLAEHGARPTCHLVSVPV DLRHDWPAALRQAGFDAHAPSAWSAEGLLPFLPAAAQQLLFERVQTLAAPGSRIAVEAPGPDFIDEAARERQRQTMQRVR DLMADLEPDRDIPDVQDLWYFEEREDVGDWLGRHGWDVTVTPAPELMARYDRRPPHDIEDAIPQTRFVAAQRTERTRPDR >Mature_319_residues PRTDDDSWEITESVGATALGVAAARAAETESENPLISDPFARVFLDAAGDGMWNWFAAPNLPAQIAEAEPDLKPRMQGMV DYMAARTAFFDNFFLAATHAGVRQVVILAAGLDSRAWRLPFEDGTTVYELDQPRVLEFKATTLAEHGARPTCHLVSVPVD LRHDWPAALRQAGFDAHAPSAWSAEGLLPFLPAAAQQLLFERVQTLAAPGSRIAVEAPGPDFIDEAARERQRQTMQRVRD LMADLEPDRDIPDVQDLWYFEEREDVGDWLGRHGWDVTVTPAPELMARYDRRPPHDIEDAIPQTRFVAAQRTERTRPDR
Specific function: Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0677 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4078_MYCPA (Q73SJ5)
Other databases:
- EMBL: AE016958 - RefSeq: NP_963012.1 - ProteinModelPortal: Q73SJ5 - SMR: Q73SJ5 - EnsemblBacteria: EBMYCT00000040366 - GeneID: 2719487 - GenomeReviews: AE016958_GR - KEGG: mpa:MAP4078 - NMPDR: fig|262316.1.peg.4078 - GeneTree: EBGT00050000015698 - HOGENOM: HBG570783 - OMA: LMADLEP - ProtClustDB: CLSK2306880 - InterPro: IPR011610 - InterPro: IPR007213 - TIGRFAMs: TIGR00027
Pfam domain/function: PF04072 LCM
EC number: NA
Molecular weight: Translated: 35749; Mature: 35618
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: BINDING 132-132
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRTDDDSWEITESVGATALGVAAARAAETESENPLISDPFARVFLDAAGDGMWNWFAAP CCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCC NLPAQIAEAEPDLKPRMQGMVDYMAARTAFFDNFFLAATHAGVRQVVILAAGLDSRAWRL CCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHEEECCCCCEEEC PFEDGTTVYELDQPRVLEFKATTLAEHGARPTCHLVSVPVDLRHDWPAALRQAGFDAHAP CCCCCCEEEECCCCEEEEEEHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHCCCCCCCC SAWSAEGLLPFLPAAAQQLLFERVQTLAAPGSRIAVEAPGPDFIDEAARERQRQTMQRVR CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH DLMADLEPDRDIPDVQDLWYFEEREDVGDWLGRHGWDVTVTPAPELMARYDRRPPHDIED HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCCHHH AIPQTRFVAAQRTERTRPDR HCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure PRTDDDSWEITESVGATALGVAAARAAETESENPLISDPFARVFLDAAGDGMWNWFAAP CCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCC NLPAQIAEAEPDLKPRMQGMVDYMAARTAFFDNFFLAATHAGVRQVVILAAGLDSRAWRL CCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHEEECCCCCEEEC PFEDGTTVYELDQPRVLEFKATTLAEHGARPTCHLVSVPVDLRHDWPAALRQAGFDAHAP CCCCCCEEEECCCCEEEEEEHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHCCCCCCCC SAWSAEGLLPFLPAAAQQLLFERVQTLAAPGSRIAVEAPGPDFIDEAARERQRQTMQRVR CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH DLMADLEPDRDIPDVQDLWYFEEREDVGDWLGRHGWDVTVTPAPELMARYDRRPPHDIED HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCCHHH AIPQTRFVAAQRTERTRPDR HCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA