Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41410168

Identifier: 41410168

GI number: 41410168

Start: 4535311

End: 4537404

Strand: Reverse

Name: 41410168

Synonym: MAP4070c

Alternate gene names: NA

Gene position: 4537404-4535311 (Counterclockwise)

Preceding gene: 41410173

Following gene: 41410167

Centisome position: 93.95

GC content: 73.45

Gene sequence:

>2094_bases
GTGATCGGCTCCGATCCCGGCTTGCTGCGGCTGCGCATGGCGACTCGGACCACGGCCGCGCTCGGGCTGTCACTGCTGGC
GCTGTGGCTGCTGACCAGGGCGACGGGACAGCCGTTGACCGTCGCGTTGCTGGGTGTGGTGATCACCATGGTCGCGTCGC
GCTCGGTCAACGAGCCCGATCCGCGCCAGCAGCGGATCACCATGGCGCTGTTGCCGGTTCCGGCCGCGGTGGCCATCACG
GCCGCTGCGGTGCTGGCGCCGCACCCGGTGGCCGGCGACGTGGTGTTCGTGCTGATTGTGTTCGCGGCGGCCTACATTCG
CCGCTTCGGCGCGCGGGGCCGCGCGCTGGGCACGGTGTGCACGTATGTGATGACTAGCCATGTGCTGCCCGACCGGCCGG
AGCGGGTGCTGCGGGCCACCATCCGGGCGCTGCGGGCCCGCATGGCGATCGTGATCGACACCACCGCCGAGGCGGTGCGC
ACCGGCCGGCTGGACGAGCGGCGGCGCCGGCGCATGCGGGCCCGCACCATCCGGCTCAACGAGACCGCCCTGATGGTGCA
GAGCCAGATCGAGGACAGGGCCGACCCGGGCACGCTGTGGCCCGGAGTCACCGCCGAACAGCTGGCCCCCTGGCTGCTGG
ACGCCGAGCTGGCCATCGAGTGGGTGGCGACGGCCGGGCGGCGGGCCGCGGCCCTGGGCGCCGAGTTACCCGAGGCCGCG
CGCGCCGAATTGGTCTCGGCGCTAACCCAATTGGGCCGCGCGATCCGGTTGCCCGAACCGGGTGGCCTGCGCGACGCCGC
CAGCCGAGCGCGCCGGCTGCTGGACGCGGCCACCGACGACCGGCCCGCCGGCACCGCGGTGCGCCGGCTGGCCCTGGCGA
TCATCAACGCCGCGACGGCGACCGCCGACGTGCGGGCCATCGTCGACGGGGCCGCCGGCGCCGCGGTGCCCGACGTCGCC
GGCAGCGAGCGCCCGCCGGCGGCCGCCGGCGCCGCGGCCGAGGAGCCCGCCGAGCAAGAAGAAGAACAACCGGCGGGTCT
GCGGCCCACCACCCGGCAGGCCATCCAGGTGTCGGTGGCGGCGTCGCTGGCCATCATCACCGGCGAGCTGGTGTCGCCGG
CCCGCTGGTATTGGGCCGTGATCGCCGCGTTCGTCATCTTCGCCGGCACCAACTCGTGGGGCGAAACCCTGACCAAGGGC
TGGCAGCGGCTGCTCGGCACGATGCTCGGCGTGCCCGCCGGCGTGCTGGTGGCCACGCTGCTGACCGGACACGAGGCGGC
CGCGCTGGCCGGCATCTTCGTGTGCCTGTTCTGTGCCTTCTATTTCATGACGGTGACCTACAGCCTGATGACGTTCTGGA
TCACCACCATGCTGGCGCTGCTGTACGGGCTGCTCGGCCAGTTCTCGTTCGGGGTGCTGATGCTTCGCATCGAAGAGACT
GCGCTCGGCGCGGTGATCGGTGCGACGGTGGCCGTCGTGGTGCTGCCGACCAACACCCGGACCGCGATCCGCGCCGACAC
CCGGGCCTTTCTGACCAGCCTGTCCGCGCTGATCGAGGCCTGCGCGGCGGCCATGTCCGGCAGCGCGGCCAGCCCGTCCG
AGCAGGCACGTCAGCTGGACCGCGACCTGCAGCAGTTCCGGGTGACCGCCAAGCCGCTGCTGGCCGGTGTCGCCGGGCTC
GCAGGCCGCCGCGGCATCCGCCGCGCGCTGCGGATCTTCACCGCCTGCGACCGGTACGGCCGGGCGCTGGCGCGCAGCAG
CGAGCAGTACCGCGGCTCGCCCGGGCCCGGCCCCCAACTGGCGCAAGCCTTTTCGGCGGCCGCGGCCCAGACGCGGCGCA
ACCTCGACGCCTTGCTGGAGGCGATCGACAGTGGCCACCCGCCGACGTTGGTCTCGGCGGCCGACGAACTCGACGCCGCG
GAAACCGCGGCCCGCCAGCACGACAGCGACGGTGACGGCGAGACACGGCCCGACGTCCGGCGATTCCTGACCGCCGTGCA
CGCCCTGCGCCAGATCGAGCGGGCCGTCATCAGCACGGCCACCAATCTCGGTGGCCACGAAGACGTCAGGACAACCACCG
CCGCGCCGCGCTGA

Upstream 100 bases:

>100_bases
TAGCTTGGTCGCCGCCGCGCGGTTCGGGTAACCATGGGGGGTACGCGCAAGAGAGGCGGTCATCGGAATAACGGATCTCT
ACGAACGCGCCCGCAACTGG

Downstream 100 bases:

>100_bases
CGGACGGGGCCACGTTTGCCACCGGCGGGTTAGCCGGGCTGCGGGCTCGTCGCATCGCGGCGCTCATCGGTGGCGATGAA
GTCCTCGATCAGCTCCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: Fusaric Acid Resistance Protein Conserved Region; LOW QUALITY PROTEIN Integral Membrane Protein; Transmembrane Protein

Number of amino acids: Translated: 697; Mature: 697

Protein sequence:

>697_residues
MIGSDPGLLRLRMATRTTAALGLSLLALWLLTRATGQPLTVALLGVVITMVASRSVNEPDPRQQRITMALLPVPAAVAIT
AAAVLAPHPVAGDVVFVLIVFAAAYIRRFGARGRALGTVCTYVMTSHVLPDRPERVLRATIRALRARMAIVIDTTAEAVR
TGRLDERRRRRMRARTIRLNETALMVQSQIEDRADPGTLWPGVTAEQLAPWLLDAELAIEWVATAGRRAAALGAELPEAA
RAELVSALTQLGRAIRLPEPGGLRDAASRARRLLDAATDDRPAGTAVRRLALAIINAATATADVRAIVDGAAGAAVPDVA
GSERPPAAAGAAAEEPAEQEEEQPAGLRPTTRQAIQVSVAASLAIITGELVSPARWYWAVIAAFVIFAGTNSWGETLTKG
WQRLLGTMLGVPAGVLVATLLTGHEAAALAGIFVCLFCAFYFMTVTYSLMTFWITTMLALLYGLLGQFSFGVLMLRIEET
ALGAVIGATVAVVVLPTNTRTAIRADTRAFLTSLSALIEACAAAMSGSAASPSEQARQLDRDLQQFRVTAKPLLAGVAGL
AGRRGIRRALRIFTACDRYGRALARSSEQYRGSPGPGPQLAQAFSAAAAQTRRNLDALLEAIDSGHPPTLVSAADELDAA
ETAARQHDSDGDGETRPDVRRFLTAVHALRQIERAVISTATNLGGHEDVRTTTAAPR

Sequences:

>Translated_697_residues
MIGSDPGLLRLRMATRTTAALGLSLLALWLLTRATGQPLTVALLGVVITMVASRSVNEPDPRQQRITMALLPVPAAVAIT
AAAVLAPHPVAGDVVFVLIVFAAAYIRRFGARGRALGTVCTYVMTSHVLPDRPERVLRATIRALRARMAIVIDTTAEAVR
TGRLDERRRRRMRARTIRLNETALMVQSQIEDRADPGTLWPGVTAEQLAPWLLDAELAIEWVATAGRRAAALGAELPEAA
RAELVSALTQLGRAIRLPEPGGLRDAASRARRLLDAATDDRPAGTAVRRLALAIINAATATADVRAIVDGAAGAAVPDVA
GSERPPAAAGAAAEEPAEQEEEQPAGLRPTTRQAIQVSVAASLAIITGELVSPARWYWAVIAAFVIFAGTNSWGETLTKG
WQRLLGTMLGVPAGVLVATLLTGHEAAALAGIFVCLFCAFYFMTVTYSLMTFWITTMLALLYGLLGQFSFGVLMLRIEET
ALGAVIGATVAVVVLPTNTRTAIRADTRAFLTSLSALIEACAAAMSGSAASPSEQARQLDRDLQQFRVTAKPLLAGVAGL
AGRRGIRRALRIFTACDRYGRALARSSEQYRGSPGPGPQLAQAFSAAAAQTRRNLDALLEAIDSGHPPTLVSAADELDAA
ETAARQHDSDGDGETRPDVRRFLTAVHALRQIERAVISTATNLGGHEDVRTTTAAPR
>Mature_697_residues
MIGSDPGLLRLRMATRTTAALGLSLLALWLLTRATGQPLTVALLGVVITMVASRSVNEPDPRQQRITMALLPVPAAVAIT
AAAVLAPHPVAGDVVFVLIVFAAAYIRRFGARGRALGTVCTYVMTSHVLPDRPERVLRATIRALRARMAIVIDTTAEAVR
TGRLDERRRRRMRARTIRLNETALMVQSQIEDRADPGTLWPGVTAEQLAPWLLDAELAIEWVATAGRRAAALGAELPEAA
RAELVSALTQLGRAIRLPEPGGLRDAASRARRLLDAATDDRPAGTAVRRLALAIINAATATADVRAIVDGAAGAAVPDVA
GSERPPAAAGAAAEEPAEQEEEQPAGLRPTTRQAIQVSVAASLAIITGELVSPARWYWAVIAAFVIFAGTNSWGETLTKG
WQRLLGTMLGVPAGVLVATLLTGHEAAALAGIFVCLFCAFYFMTVTYSLMTFWITTMLALLYGLLGQFSFGVLMLRIEET
ALGAVIGATVAVVVLPTNTRTAIRADTRAFLTSLSALIEACAAAMSGSAASPSEQARQLDRDLQQFRVTAKPLLAGVAGL
AGRRGIRRALRIFTACDRYGRALARSSEQYRGSPGPGPQLAQAFSAAAAQTRRNLDALLEAIDSGHPPTLVSAADELDAA
ETAARQHDSDGDGETRPDVRRFLTAVHALRQIERAVISTATNLGGHEDVRTTTAAPR

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73814; Mature: 73814

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGSDPGLLRLRMATRTTAALGLSLLALWLLTRATGQPLTVALLGVVITMVASRSVNEPD
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
PRQQRITMALLPVPAAVAITAAAVLAPHPVAGDVVFVLIVFAAAYIRRFGARGRALGTVC
CHHHHEEHHEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
TYVMTSHVLPDRPERVLRATIRALRARMAIVIDTTAEAVRTGRLDERRRRRMRARTIRLN
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECHHHHHHHCCCHHHHHHHHHHHHHCCC
ETALMVQSQIEDRADPGTLWPGVTAEQLAPWLLDAELAIEWVATAGRRAAALGAELPEAA
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHH
RAELVSALTQLGRAIRLPEPGGLRDAASRARRLLDAATDDRPAGTAVRRLALAIINAATA
HHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
TADVRAIVDGAAGAAVPDVAGSERPPAAAGAAAEEPAEQEEEQPAGLRPTTRQAIQVSVA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHH
ASLAIITGELVSPARWYWAVIAAFVIFAGTNSWGETLTKGWQRLLGTMLGVPAGVLVATL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LTGHEAAALAGIFVCLFCAFYFMTVTYSLMTFWITTMLALLYGLLGQFSFGVLMLRIEET
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHH
ALGAVIGATVAVVVLPTNTRTAIRADTRAFLTSLSALIEACAAAMSGSAASPSEQARQLD
HHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
RDLQQFRVTAKPLLAGVAGLAGRRGIRRALRIFTACDRYGRALARSSEQYRGSPGPGPQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHH
AQAFSAAAAQTRRNLDALLEAIDSGHPPTLVSAADELDAAETAARQHDSDGDGETRPDVR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
RFLTAVHALRQIERAVISTATNLGGHEDVRTTTAAPR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIGSDPGLLRLRMATRTTAALGLSLLALWLLTRATGQPLTVALLGVVITMVASRSVNEPD
CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCC
PRQQRITMALLPVPAAVAITAAAVLAPHPVAGDVVFVLIVFAAAYIRRFGARGRALGTVC
CHHHHEEHHEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
TYVMTSHVLPDRPERVLRATIRALRARMAIVIDTTAEAVRTGRLDERRRRRMRARTIRLN
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECHHHHHHHCCCHHHHHHHHHHHHHCCC
ETALMVQSQIEDRADPGTLWPGVTAEQLAPWLLDAELAIEWVATAGRRAAALGAELPEAA
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHH
RAELVSALTQLGRAIRLPEPGGLRDAASRARRLLDAATDDRPAGTAVRRLALAIINAATA
HHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
TADVRAIVDGAAGAAVPDVAGSERPPAAAGAAAEEPAEQEEEQPAGLRPTTRQAIQVSVA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHH
ASLAIITGELVSPARWYWAVIAAFVIFAGTNSWGETLTKGWQRLLGTMLGVPAGVLVATL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LTGHEAAALAGIFVCLFCAFYFMTVTYSLMTFWITTMLALLYGLLGQFSFGVLMLRIEET
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEHHH
ALGAVIGATVAVVVLPTNTRTAIRADTRAFLTSLSALIEACAAAMSGSAASPSEQARQLD
HHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
RDLQQFRVTAKPLLAGVAGLAGRRGIRRALRIFTACDRYGRALARSSEQYRGSPGPGPQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHH
AQAFSAAAAQTRRNLDALLEAIDSGHPPTLVSAADELDAAETAARQHDSDGDGETRPDVR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
RFLTAVHALRQIERAVISTATNLGGHEDVRTTTAAPR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA