Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410162
Identifier: 41410162
GI number: 41410162
Start: 4526606
End: 4527547
Strand: Reverse
Name: 41410162
Synonym: MAP4064c
Alternate gene names: NA
Gene position: 4527547-4526606 (Counterclockwise)
Preceding gene: 41410165
Following gene: 41410161
Centisome position: 93.74
GC content: 66.99
Gene sequence:
>942_bases ATGACGGTACCCAACGACGACACGTGGGGTCCGGCCACCAGCGTGGGAACGACGGCCACGATGGCGGCGGCGGCAAGGGC CATCGCCACCCGGGATGGGGTCATCAACGATCCATTCGCCGAGCCGTTGGTGCGGGCGGTCGGTGTGAATTTTCTGACCC GCTGGGCTATCGGTGAGCTGGTCGCCTCGGATGTCGACGTCGAGGGCAGCCCATGGGGCTTGGCGCAGATGCCTGCATCG ATTGCGGCCCGCACCCGGTACTTCGACGAGTTCTATGCCGATGCCGCAGCGGCGGGCATCCGCCAAGCCGTCATCCTCGC CTCGGGTCTGGACACCCGCGCCTATCGACTGGACTGGCCCGCAGGCATGACGGTGTTCGAGATCGACCAACCCGCCGTCA TCGAGTTCAAAACCACGGCACTGGCCAGGCTGGGAGCCGAGCCAAAAGCCGACTTGCGCACGGTCGCGGTCGACCTGCGC GACGATTGGTCGACGGCACTCGCGACGGCGGGTTTGGACAGCAGTAAACCCACGGCGTGGATCGCCGAAGGTCTGTTCGG CTATCTGGCACCCGAGGCCCAAGATGGGCTGCTCGATGCCGTCACCGCGCTGAGCACGCCAGGCAGCCGACTCGGGAGTG AAGCTGTGCCGAATACCGCCGACATGGACCCCCACGCAGCGCGCGAACGGATGCGCGCGGCGACGGCCAAGTGGCGCGAC CACGGCTTCGAACTCGACGTCGACGTGATCTCATTTGCGGGTGAGCGCCACGACGTCGGCGCGTACCTGCAGGCGCATGG CTGGACGACGGTCGCAACGCCGATGGCCGAGCTGCTCGCCGACCACGGGTTGCCGGCGATCGCGCGTGCCGACGATGATC GACAGACGATGAATGGCGTCACCTACTACACGTCGACGCTGGGCACAGGCCGGCAGCGTTAG
Upstream 100 bases:
>100_bases AGGCCCATTCGGGATTGCGGCCCGATACCTTGGGCTCTGCGCGGGTGCATCAGGACCACAACGGGTTGCACCGCATCCAG GCGACTTTCGGAGGTTGACG
Downstream 100 bases:
>100_bases CGGCGCTCCCGTTCACAGGTTTTGACAATTGCTCCTTGTAGGGCTCGGCCGATCTGTTGGCTCTGTGCCGCGTAGTCGGT GTAAGCGCGCTGGAAGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MTVPNDDTWGPATSVGTTATMAAAARAIATRDGVINDPFAEPLVRAVGVNFLTRWAIGELVASDVDVEGSPWGLAQMPAS IAARTRYFDEFYADAAAAGIRQAVILASGLDTRAYRLDWPAGMTVFEIDQPAVIEFKTTALARLGAEPKADLRTVAVDLR DDWSTALATAGLDSSKPTAWIAEGLFGYLAPEAQDGLLDAVTALSTPGSRLGSEAVPNTADMDPHAARERMRAATAKWRD HGFELDVDVISFAGERHDVGAYLQAHGWTTVATPMAELLADHGLPAIARADDDRQTMNGVTYYTSTLGTGRQR
Sequences:
>Translated_313_residues MTVPNDDTWGPATSVGTTATMAAAARAIATRDGVINDPFAEPLVRAVGVNFLTRWAIGELVASDVDVEGSPWGLAQMPAS IAARTRYFDEFYADAAAAGIRQAVILASGLDTRAYRLDWPAGMTVFEIDQPAVIEFKTTALARLGAEPKADLRTVAVDLR DDWSTALATAGLDSSKPTAWIAEGLFGYLAPEAQDGLLDAVTALSTPGSRLGSEAVPNTADMDPHAARERMRAATAKWRD HGFELDVDVISFAGERHDVGAYLQAHGWTTVATPMAELLADHGLPAIARADDDRQTMNGVTYYTSTLGTGRQR >Mature_312_residues TVPNDDTWGPATSVGTTATMAAAARAIATRDGVINDPFAEPLVRAVGVNFLTRWAIGELVASDVDVEGSPWGLAQMPASI AARTRYFDEFYADAAAAGIRQAVILASGLDTRAYRLDWPAGMTVFEIDQPAVIEFKTTALARLGAEPKADLRTVAVDLRD DWSTALATAGLDSSKPTAWIAEGLFGYLAPEAQDGLLDAVTALSTPGSRLGSEAVPNTADMDPHAARERMRAATAKWRDH GFELDVDVISFAGERHDVGAYLQAHGWTTVATPMAELLADHGLPAIARADDDRQTMNGVTYYTSTLGTGRQR
Specific function: Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0677 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4064_MYCPA (Q73SK9)
Other databases:
- EMBL: AE016958 - RefSeq: NP_962998.1 - ProteinModelPortal: Q73SK9 - SMR: Q73SK9 - EnsemblBacteria: EBMYCT00000038577 - GeneID: 2720608 - GenomeReviews: AE016958_GR - KEGG: mpa:MAP4064c - NMPDR: fig|262316.1.peg.4064 - GeneTree: EBGT00050000015698 - HOGENOM: HBG570783 - OMA: ISFAGER - ProtClustDB: CLSK763539 - InterPro: IPR011610 - InterPro: IPR007213 - TIGRFAMs: TIGR00027
Pfam domain/function: PF04072 LCM
EC number: NA
Molecular weight: Translated: 33336; Mature: 33205
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: BINDING 129-129
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPNDDTWGPATSVGTTATMAAAARAIATRDGVINDPFAEPLVRAVGVNFLTRWAIGEL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VASDVDVEGSPWGLAQMPASIAARTRYFDEFYADAAAAGIRQAVILASGLDTRAYRLDWP HHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC AGMTVFEIDQPAVIEFKTTALARLGAEPKADLRTVAVDLRDDWSTALATAGLDSSKPTAW CCCEEEECCCCCEEEEHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCHHH IAEGLFGYLAPEAQDGLLDAVTALSTPGSRLGSEAVPNTADMDPHAARERMRAATAKWRD HHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH HGFELDVDVISFAGERHDVGAYLQAHGWTTVATPMAELLADHGLPAIARADDDRQTMNGV CCCEECHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHCCE TYYTSTLGTGRQR EEEEECCCCCCCC >Mature Secondary Structure TVPNDDTWGPATSVGTTATMAAAARAIATRDGVINDPFAEPLVRAVGVNFLTRWAIGEL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VASDVDVEGSPWGLAQMPASIAARTRYFDEFYADAAAAGIRQAVILASGLDTRAYRLDWP HHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC AGMTVFEIDQPAVIEFKTTALARLGAEPKADLRTVAVDLRDDWSTALATAGLDSSKPTAW CCCEEEECCCCCEEEEHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCHHH IAEGLFGYLAPEAQDGLLDAVTALSTPGSRLGSEAVPNTADMDPHAARERMRAATAKWRD HHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH HGFELDVDVISFAGERHDVGAYLQAHGWTTVATPMAELLADHGLPAIARADDDRQTMNGV CCCEECHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHCCE TYYTSTLGTGRQR EEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA