| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410032
Identifier: 41410032
GI number: 41410032
Start: 4394509
End: 4395027
Strand: Reverse
Name: 41410032
Synonym: MAP3934c
Alternate gene names: NA
Gene position: 4395027-4394509 (Counterclockwise)
Preceding gene: 41410036
Following gene: 41410031
Centisome position: 91.0
GC content: 68.4
Gene sequence:
>519_bases ATGCTAACTGGCAGGCTGGACCTCATGTCCCTCGTCGTGCCGCCCTATCCGCCCGCCCGCTACACGAAAGACCAGCCGGA GACCAGCGCCTGGCTCAAGCGGGCCGACGAACCGCCCGACTACCAGACCGCCGGCGTCAAGTACCACTACCTGGCCAACC AGCACGACACCGCCGGCGACTACGGGTTGTACCGGGTCGACATCGCCCCGGCCGGCGGCGGGCCCGGGCCGCATTTTCAC CGCGCCATGTCCGAGGCGTTCTTCGTGCTCTCCGGCACGATGAAGCTCTACGACGGCACCGAGTGGACCGACGGGCACCA GGGCGACTTCCTTTACGTCCCGCCCGGCGGGGTGCACGGCTTCCGCAACGAGGCCGACGACCCCGCGTCGATCCTGATGT TGTTCGCGCCCGGCGCGCCGCGCGAGGCCTACTTCGAAGGCTTCGCCGCGCTGGCCGACATGACCGACGAGGAACGCCGG GAATGGTTCGCCCGGCACGACAACTTCTGGGTTCAATAG
Upstream 100 bases:
>100_bases CATGCCGCGCCGCTCGATCTCGTCGAACAGCTGCGCCGCCTTGTCCTGGGCGTCCAGCAGCCGCCGCACCCGCACGTCCT CGGAGGCCTCCACCTTGGCG
Downstream 100 bases:
>100_bases CGCGTCCCGGTCGGTGAGTATGTTGTGGGCCATGGCTCCCCACGACAAACAGCACCGCGACTGGTCGGAGGCCGACGTTG GTGATCAGAGCGGCCGCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin Domain Protein; Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Conserved Barrel Domain-Containing Protein
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MLTGRLDLMSLVVPPYPPARYTKDQPETSAWLKRADEPPDYQTAGVKYHYLANQHDTAGDYGLYRVDIAPAGGGPGPHFH RAMSEAFFVLSGTMKLYDGTEWTDGHQGDFLYVPPGGVHGFRNEADDPASILMLFAPGAPREAYFEGFAALADMTDEERR EWFARHDNFWVQ
Sequences:
>Translated_172_residues MLTGRLDLMSLVVPPYPPARYTKDQPETSAWLKRADEPPDYQTAGVKYHYLANQHDTAGDYGLYRVDIAPAGGGPGPHFH RAMSEAFFVLSGTMKLYDGTEWTDGHQGDFLYVPPGGVHGFRNEADDPASILMLFAPGAPREAYFEGFAALADMTDEERR EWFARHDNFWVQ >Mature_172_residues MLTGRLDLMSLVVPPYPPARYTKDQPETSAWLKRADEPPDYQTAGVKYHYLANQHDTAGDYGLYRVDIAPAGGGPGPHFH RAMSEAFFVLSGTMKLYDGTEWTDGHQGDFLYVPPGGVHGFRNEADDPASILMLFAPGAPREAYFEGFAALADMTDEERR EWFARHDNFWVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19302; Mature: 19302
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTGRLDLMSLVVPPYPPARYTKDQPETSAWLKRADEPPDYQTAGVKYHYLANQHDTAGD CCCCCCCHHHEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCC YGLYRVDIAPAGGGPGPHFHRAMSEAFFVLSGTMKLYDGTEWTDGHQGDFLYVPPGGVHG CCEEEEEEEECCCCCCHHHHHHHHHHEEEEECCEEEECCCCCCCCCCCCEEEECCCCCCC FRNEADDPASILMLFAPGAPREAYFEGFAALADMTDEERREWFARHDNFWVQ CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCEECC >Mature Secondary Structure MLTGRLDLMSLVVPPYPPARYTKDQPETSAWLKRADEPPDYQTAGVKYHYLANQHDTAGD CCCCCCCHHHEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCC YGLYRVDIAPAGGGPGPHFHRAMSEAFFVLSGTMKLYDGTEWTDGHQGDFLYVPPGGVHG CCEEEEEEEECCCCCCHHHHHHHHHHEEEEECCEEEECCCCCCCCCCCCEEEECCCCCCC FRNEADDPASILMLFAPGAPREAYFEGFAALADMTDEERREWFARHDNFWVQ CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA