| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410036
Identifier: 41410036
GI number: 41410036
Start: 4398856
End: 4399248
Strand: Reverse
Name: 41410036
Synonym: MAP3938c
Alternate gene names: NA
Gene position: 4399248-4398856 (Counterclockwise)
Preceding gene: 41410037
Following gene: 41410032
Centisome position: 91.09
GC content: 70.99
Gene sequence:
>393_bases ATGCGCAGCAAGAAGAAGGTCGATCTGCAGGCGCTGGCCGACGCGCTGGCCGACTACCCGTATGCCTACCTGATCACGGT CGACGACGACTACCGCGCGCACACCGTGACGGTCGAACCGGTGCTGCGTGAGTCGATCCTGGACGTCGGGTTGATCGGTG GCCGCACCCAGCAGAACCTGGCCCGGCGCCGCGACGTCACCCTGCTGTGGCCGCCGACCGAGCCGGGCGGCTACTCGCTG ATCGTCGACGGCACGGCGCAGGTGAGCGAGGCCGGCGACGCGGTTCGGCTGGCGGTGGCGCCCACCCGCGCGCTGTTGCA CCGCGACGCCGACTCGGCCGACGCCGCCAAGGGCTGTCTGCACGACTGCGTGGTGTTCTCGCTGCCGGCCTAG
Upstream 100 bases:
>100_bases CGGCTCGGGCGCCGTGGCCCGCGGCTACACCTCGCGCATCGCGGGGTTTCTCGCGCCGCGCGCGCCGCAGTGACGCCGCG CGCGCCTATCGTGGAACATC
Downstream 100 bases:
>100_bases ACGGTATGGGGGTCTGGGGCCTCGCTCACATGTGAGGGCGTTTTGATCAGCGCAAAAAACGCTCCGTGGTTGCCAACGCC GCGATCGCGCGTGAGCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MRSKKKVDLQALADALADYPYAYLITVDDDYRAHTVTVEPVLRESILDVGLIGGRTQQNLARRRDVTLLWPPTEPGGYSL IVDGTAQVSEAGDAVRLAVAPTRALLHRDADSADAAKGCLHDCVVFSLPA
Sequences:
>Translated_130_residues MRSKKKVDLQALADALADYPYAYLITVDDDYRAHTVTVEPVLRESILDVGLIGGRTQQNLARRRDVTLLWPPTEPGGYSL IVDGTAQVSEAGDAVRLAVAPTRALLHRDADSADAAKGCLHDCVVFSLPA >Mature_130_residues MRSKKKVDLQALADALADYPYAYLITVDDDYRAHTVTVEPVLRESILDVGLIGGRTQQNLARRRDVTLLWPPTEPGGYSL IVDGTAQVSEAGDAVRLAVAPTRALLHRDADSADAAKGCLHDCVVFSLPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14044; Mature: 14044
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSKKKVDLQALADALADYPYAYLITVDDDYRAHTVTVEPVLRESILDVGLIGGRTQQNL CCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEEEECHHHHHHHHHHHCCCCCCHHHH ARRRDVTLLWPPTEPGGYSLIVDGTAQVSEAGDAVRLAVAPTRALLHRDADSADAAKGCL HHHCCEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHCCCCCCHHHHHHH HDCVVFSLPA HHHHEEECCC >Mature Secondary Structure MRSKKKVDLQALADALADYPYAYLITVDDDYRAHTVTVEPVLRESILDVGLIGGRTQQNL CCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEEEECHHHHHHHHHHHCCCCCCHHHH ARRRDVTLLWPPTEPGGYSLIVDGTAQVSEAGDAVRLAVAPTRALLHRDADSADAAKGCL HHHCCEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHCCCCCCHHHHHHH HDCVVFSLPA HHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3029018; 9634230; 12218036 [H]