Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409887

Identifier: 41409887

GI number: 41409887

Start: 4236162

End: 4237361

Strand: Reverse

Name: 41409887

Synonym: MAP3789c

Alternate gene names: NA

Gene position: 4237361-4236162 (Counterclockwise)

Preceding gene: 41409889

Following gene: 41409874

Centisome position: 87.73

GC content: 68.67

Gene sequence:

>1200_bases
GTGGCGCCCGACTTGGATCCGTTCGACCCGCCCATCCCCGTTCCAGACGTTCCCGGCGCCGATGTACCGCCCGGCGCCGG
CGGATTACCCCCCACTTCGGCGTTGTCGCCTCGTCAGCGAATGGTAGTCGAGGCCTCGGCTCTGGGTGATCTGGCCCTGC
GCACCTGGGTGGCCTCGCTGCTGTCCACCACGGTGGCGCCGTTCGTGGTCGCCAACGCGCTGCGGCACGCCGACGCCGCC
ACCGAACGCGCCAATCTCGAGTTCTACGCCGAGCTGGGCGCGGCGGCCGACCCCGACCGGTCCTTTCCGCCGCCCACCGA
ACCGCCCCGGGTCACCTCCCGGCGGGCCAGCCCGTTGGCCGAATGGGTGGCCCGCGGCACGGTGGACAACCTCGCGTTCG
ACAGCAGCTTCACCGCGGTCAACCCGGCCATGCGGGCGCGCTGGAGCGGGTGGGGCCGCAACAACGTGGTGCGCGCGCAG
CATTGGCGCCACGACGACGGGCCGCGGCCCACGCTGTGCGTCATCCACGGTTTCCTGGGGTCGTCGTATCTGGCCAACGG
GCGGTTCTTTTCGTTGCCCTGGTACTACCGGGCCGGCTACGACGTGTTGATGTACACCTTGCCTTTTCACGGCAAGCGGT
CCGAAAGGTTCTCGCCCTTCAGCGGTTTCGGCTATTTCGCCGGTGGACTCAGCGGCTTCGCCGAGGCGATGGCCCAGGCC
GTGCACGACTTTCGTTCGCTCATCGACTATCTGCGCCACACCGGTGTCGAGCGCATCGCGCTCACCGGCATCTCGCTGGG
CGGCTACACCTCGGCGCTGGTGGCCTCGGTGGACGATCGGCTCGAGGCCGTCATCCCCAACTGTCCCGTCGTCACCCCGG
CGACGCTGTTCGACGAATGGTTCCCGGCCAACAAGCTGGTCGGGCTGGGCCTGCGATCGTCCGACATCAGCCGAGCGCAG
TTGGCCGCCGGGTTGGCCTACCACTGCCCGCTCACCTACCGGCCGGTGCTGGCCAAAGACCGGCGGATGATCATCACCGG
CCTCGGTGACCGGATGGCCCCGCCCGAGCGCGCCGTCAAGCTATGGCAGCACTGGGATCGTTGTGCGCTGCACTGGTTTC
CGGGCAGCCATGTGCTGCACATCAGCCAGCTGGACTACCTGCGCCGGATGACCGCGTTCCTGCAGCAGGTCATGTTCTAG

Upstream 100 bases:

>100_bases
TCGACACCGCCCCTGCGTGGGCCCGAGATGACATCACGGCGAAGCGAAACGGGCCGAACGCTGTAGGAAGCGCGCGACGG
CCGGGCTAGCATCGGCGTTC

Downstream 100 bases:

>100_bases
CGGCGGCGACGGTGTCGGCGTCACCGGCCGGCGCTCCTTGGGTGGGCCAGTGCAGCCGGTCGAGCAGGTCCGCGGTCGCC
GCGGTGTGCCCGTCCAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MAPDLDPFDPPIPVPDVPGADVPPGAGGLPPTSALSPRQRMVVEASALGDLALRTWVASLLSTTVAPFVVANALRHADAA
TERANLEFYAELGAAADPDRSFPPPTEPPRVTSRRASPLAEWVARGTVDNLAFDSSFTAVNPAMRARWSGWGRNNVVRAQ
HWRHDDGPRPTLCVIHGFLGSSYLANGRFFSLPWYYRAGYDVLMYTLPFHGKRSERFSPFSGFGYFAGGLSGFAEAMAQA
VHDFRSLIDYLRHTGVERIALTGISLGGYTSALVASVDDRLEAVIPNCPVVTPATLFDEWFPANKLVGLGLRSSDISRAQ
LAAGLAYHCPLTYRPVLAKDRRMIITGLGDRMAPPERAVKLWQHWDRCALHWFPGSHVLHISQLDYLRRMTAFLQQVMF

Sequences:

>Translated_399_residues
MAPDLDPFDPPIPVPDVPGADVPPGAGGLPPTSALSPRQRMVVEASALGDLALRTWVASLLSTTVAPFVVANALRHADAA
TERANLEFYAELGAAADPDRSFPPPTEPPRVTSRRASPLAEWVARGTVDNLAFDSSFTAVNPAMRARWSGWGRNNVVRAQ
HWRHDDGPRPTLCVIHGFLGSSYLANGRFFSLPWYYRAGYDVLMYTLPFHGKRSERFSPFSGFGYFAGGLSGFAEAMAQA
VHDFRSLIDYLRHTGVERIALTGISLGGYTSALVASVDDRLEAVIPNCPVVTPATLFDEWFPANKLVGLGLRSSDISRAQ
LAAGLAYHCPLTYRPVLAKDRRMIITGLGDRMAPPERAVKLWQHWDRCALHWFPGSHVLHISQLDYLRRMTAFLQQVMF
>Mature_398_residues
APDLDPFDPPIPVPDVPGADVPPGAGGLPPTSALSPRQRMVVEASALGDLALRTWVASLLSTTVAPFVVANALRHADAAT
ERANLEFYAELGAAADPDRSFPPPTEPPRVTSRRASPLAEWVARGTVDNLAFDSSFTAVNPAMRARWSGWGRNNVVRAQH
WRHDDGPRPTLCVIHGFLGSSYLANGRFFSLPWYYRAGYDVLMYTLPFHGKRSERFSPFSGFGYFAGGLSGFAEAMAQAV
HDFRSLIDYLRHTGVERIALTGISLGGYTSALVASVDDRLEAVIPNCPVVTPATLFDEWFPANKLVGLGLRSSDISRAQL
AAGLAYHCPLTYRPVLAKDRRMIITGLGDRMAPPERAVKLWQHWDRCALHWFPGSHVLHISQLDYLRRMTAFLQQVMF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019149 [H]

Pfam domain/function: PF09752 DUF2048 [H]

EC number: NA

Molecular weight: Translated: 43866; Mature: 43735

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPDLDPFDPPIPVPDVPGADVPPGAGGLPPTSALSPRQRMVVEASALGDLALRTWVASL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LSTTVAPFVVANALRHADAATERANLEFYAELGAAADPDRSFPPPTEPPRVTSRRASPLA
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
EWVARGTVDNLAFDSSFTAVNPAMRARWSGWGRNNVVRAQHWRHDDGPRPTLCVIHGFLG
HHHHHCCHHHHCCCCCCCCCCHHHHHHCCCCCCCCCEEHHCCCCCCCCCCEEEEEEHHHC
SSYLANGRFFSLPWYYRAGYDVLMYTLPFHGKRSERFSPFSGFGYFAGGLSGFAEAMAQA
CHHCCCCEEEECCCHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VHDFRSLIDYLRHTGVERIALTGISLGGYTSALVASVDDRLEAVIPNCPVVTPATLFDEW
HHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
FPANKLVGLGLRSSDISRAQLAAGLAYHCPLTYRPVLAKDRRMIITGLGDRMAPPERAVK
CCCCCEEECCCCCCCCHHHHHHHCHHEECCCCCCCHHHCCCEEEEEECCCCCCCHHHHHH
LWQHWDRCALHWFPGSHVLHISQLDYLRRMTAFLQQVMF
HHHHHHHHEEEECCCCCEEEHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
APDLDPFDPPIPVPDVPGADVPPGAGGLPPTSALSPRQRMVVEASALGDLALRTWVASL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LSTTVAPFVVANALRHADAATERANLEFYAELGAAADPDRSFPPPTEPPRVTSRRASPLA
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
EWVARGTVDNLAFDSSFTAVNPAMRARWSGWGRNNVVRAQHWRHDDGPRPTLCVIHGFLG
HHHHHCCHHHHCCCCCCCCCCHHHHHHCCCCCCCCCEEHHCCCCCCCCCCEEEEEEHHHC
SSYLANGRFFSLPWYYRAGYDVLMYTLPFHGKRSERFSPFSGFGYFAGGLSGFAEAMAQA
CHHCCCCEEEECCCHHHCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VHDFRSLIDYLRHTGVERIALTGISLGGYTSALVASVDDRLEAVIPNCPVVTPATLFDEW
HHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
FPANKLVGLGLRSSDISRAQLAAGLAYHCPLTYRPVLAKDRRMIITGLGDRMAPPERAVK
CCCCCEEECCCCCCCCHHHHHHHCHHEECCCCCCCHHHCCCEEEEEECCCCCCCHHHHHH
LWQHWDRCALHWFPGSHVLHISQLDYLRRMTAFLQQVMF
HHHHHHHHEEEECCCCCEEEHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]