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The map label for this gene is yhaQ [H]

Identifier: 41408658

GI number: 41408658

Start: 2877542

End: 2878315

Strand: Direct

Name: yhaQ [H]

Synonym: MAP2560

Alternate gene names: 41408658

Gene position: 2877542-2878315 (Clockwise)

Preceding gene: 41408657

Following gene: 41408659

Centisome position: 59.58

GC content: 66.67

Gene sequence:

>774_bases
GTGAAAGCCGACGGCGGCACGGTGCGGCTGCTGGGCGGCGACCCGTGGACCCAGGCCGTCGAACTGCATCGCCAAATCGC
TTATGTTCCAGGCGATGTCACGCTGTGGCCGTCACTGACCGGCGGCGAGATCATCGACCTGCTGGCCCGGATGCGCGGCG
GCATCGACAAGAAGCGCCGCGCCGAGCTGATCGAGCGCTTCGACCTCGACCCGCACAAGAAGGCACGCACCTACTCCAAG
GGCAACCGGCAGAAGGTTTCGCTGATTTCGGCGTTCTCGTCGCGCGCCCGGCTGCTGCTCTTGGACGAGCCCAGCAGCGG
CCTGGACCCGTCGATGGAGAACGTTTTTCAACAGTGCGTGGCGCAGGCCCGCGACCGGGGCACCACGGTGCTGCTGTCCA
GCCACATCCTGGCCGAGACGGAGGCGTTGTGCGAACGGGTGACGATCATCCGGGCCGGCAAGACCATCGAAAGCGGTTCG
CTGAGCTCGATGCGGCATCTGAGCCGCACCTCGATCAAGGCCGAAATGACCGGTGACCCCGGTGATCTCAGGCGGATCAA
GGGCGTCGAGGACATCAGCATCGAGGGCAACACGCTGCGCGCGCAGGTCGACAGCGAAAGCCTCGGTGAGCTCATCCGGG
TGCTCGGGGATGCCAGGGTGCGCAGTCTGGTCAGCCAGCCCCCGACCCTCGAAGAGCTCTTCCTGCGCCACTACGACACC
TCCGGGACCGACGGCCAGCGCCGAGCCCACGAGGCCGAGGTGTCGCTGTCATGA

Upstream 100 bases:

>100_bases
GGACGGTCTCGACCTCACCGTGCGGGAGGGAGAAGTCCACGGTTTCCTGGGGCCCAACGGCGCCGGCAAGTCGACCACGA
TCCGCATCCTGCTGGGACTG

Downstream 100 bases:

>100_bases
GCGCGACAACCCTGAACCGGCCCTCCGCATCGGCCTCGCCCGCGCCGCTAGGCGGTTCGCACTTCTCCGGCACGCTGCAG
ATGCTGCGGCTCTACCTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKADGGTVRLLGGDPWTQAVELHRQIAYVPGDVTLWPSLTGGEIIDLLARMRGGIDKKRRAELIERFDLDPHKKARTYSK
GNRQKVSLISAFSSRARLLLLDEPSSGLDPSMENVFQQCVAQARDRGTTVLLSSHILAETEALCERVTIIRAGKTIESGS
LSSMRHLSRTSIKAEMTGDPGDLRRIKGVEDISIEGNTLRAQVDSESLGELIRVLGDARVRSLVSQPPTLEELFLRHYDT
SGTDGQRRAHEAEVSLS

Sequences:

>Translated_257_residues
MKADGGTVRLLGGDPWTQAVELHRQIAYVPGDVTLWPSLTGGEIIDLLARMRGGIDKKRRAELIERFDLDPHKKARTYSK
GNRQKVSLISAFSSRARLLLLDEPSSGLDPSMENVFQQCVAQARDRGTTVLLSSHILAETEALCERVTIIRAGKTIESGS
LSSMRHLSRTSIKAEMTGDPGDLRRIKGVEDISIEGNTLRAQVDSESLGELIRVLGDARVRSLVSQPPTLEELFLRHYDT
SGTDGQRRAHEAEVSLS
>Mature_257_residues
MKADGGTVRLLGGDPWTQAVELHRQIAYVPGDVTLWPSLTGGEIIDLLARMRGGIDKKRRAELIERFDLDPHKKARTYSK
GNRQKVSLISAFSSRARLLLLDEPSSGLDPSMENVFQQCVAQARDRGTTVLLSSHILAETEALCERVTIIRAGKTIESGS
LSSMRHLSRTSIKAEMTGDPGDLRRIKGVEDISIEGNTLRAQVDSESLGELIRVLGDARVRSLVSQPPTLEELFLRHYDT
SGTDGQRRAHEAEVSLS

Specific function: Unknown

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI116734710, Length=192, Percent_Identity=32.2916666666667, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI21536376, Length=238, Percent_Identity=27.3109243697479, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI150417984, Length=244, Percent_Identity=28.6885245901639, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI45446740, Length=168, Percent_Identity=29.7619047619048, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI47078218, Length=168, Percent_Identity=29.7619047619048, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI6005701, Length=170, Percent_Identity=30, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI27436953, Length=178, Percent_Identity=31.4606741573034, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI105990541, Length=219, Percent_Identity=28.7671232876712, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI153792144, Length=150, Percent_Identity=30.6666666666667, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI31657092, Length=134, Percent_Identity=35.8208955223881, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI27477115, Length=146, Percent_Identity=30.1369863013699, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI27881501, Length=145, Percent_Identity=32.4137931034483, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI30795238, Length=145, Percent_Identity=32.4137931034483, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1786319, Length=241, Percent_Identity=26.9709543568465, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI48994943, Length=166, Percent_Identity=30.1204819277108, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI87081782, Length=164, Percent_Identity=31.0975609756098, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789593, Length=143, Percent_Identity=27.972027972028, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787759, Length=126, Percent_Identity=33.3333333333333, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788472, Length=112, Percent_Identity=30.3571428571429, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71983510, Length=250, Percent_Identity=26.4, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71983516, Length=250, Percent_Identity=26.4, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71983523, Length=234, Percent_Identity=26.9230769230769, Blast_Score=80, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17565586, Length=133, Percent_Identity=33.0827067669173, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI115533608, Length=159, Percent_Identity=32.0754716981132, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17510237, Length=149, Percent_Identity=28.1879194630872, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28574150, Length=189, Percent_Identity=29.1005291005291, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI116007328, Length=189, Percent_Identity=29.1005291005291, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24643674, Length=174, Percent_Identity=30.4597701149425, Blast_Score=84, Evalue=9e-17,
Organism=Drosophila melanogaster, GI221512771, Length=153, Percent_Identity=32.0261437908497, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI116007184, Length=249, Percent_Identity=27.710843373494, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI221500365, Length=249, Percent_Identity=27.710843373494, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24666092, Length=165, Percent_Identity=29.6969696969697, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI28573573, Length=166, Percent_Identity=30.1204819277108, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28573571, Length=166, Percent_Identity=30.1204819277108, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24648314, Length=171, Percent_Identity=28.0701754385965, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 28298; Mature: 28298

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKADGGTVRLLGGDPWTQAVELHRQIAYVPGDVTLWPSLTGGEIIDLLARMRGGIDKKRR
CCCCCCEEEEECCCCHHHHHHHHHHHEECCCCEEECCCCCCHHHHHHHHHHHCCCCHHHH
AELIERFDLDPHKKARTYSKGNRQKVSLISAFSSRARLLLLDEPSSGLDPSMENVFQQCV
HHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHH
AQARDRGTTVLLSSHILAETEALCERVTIIRAGKTIESGSLSSMRHLSRTSIKAEMTGDP
HHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHEEEEECCCC
GDLRRIKGVEDISIEGNTLRAQVDSESLGELIRVLGDARVRSLVSQPPTLEELFLRHYDT
HHHHHHCCCCEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
SGTDGQRRAHEAEVSLS
CCCCCHHHHHHCCCCCC
>Mature Secondary Structure
MKADGGTVRLLGGDPWTQAVELHRQIAYVPGDVTLWPSLTGGEIIDLLARMRGGIDKKRR
CCCCCCEEEEECCCCHHHHHHHHHHHEECCCCEEECCCCCCHHHHHHHHHHHCCCCHHHH
AELIERFDLDPHKKARTYSKGNRQKVSLISAFSSRARLLLLDEPSSGLDPSMENVFQQCV
HHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHH
AQARDRGTTVLLSSHILAETEALCERVTIIRAGKTIESGSLSSMRHLSRTSIKAEMTGDP
HHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHEEEEECCCC
GDLRRIKGVEDISIEGNTLRAQVDSESLGELIRVLGDARVRSLVSQPPTLEELFLRHYDT
HHHHHHCCCCEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
SGTDGQRRAHEAEVSLS
CCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]