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The map label for this gene is ybiH [C]

Identifier: 41408657

GI number: 41408657

Start: 2876742

End: 2877545

Strand: Direct

Name: ybiH [C]

Synonym: MAP2559

Alternate gene names: 41408657

Gene position: 2876742-2877545 (Clockwise)

Preceding gene: 41408656

Following gene: 41408658

Centisome position: 59.56

GC content: 65.42

Gene sequence:

>804_bases
ATGCGTTCAGCCGACCTCACCGCCGCCGCCCGGATCCGGGACGCGGCCATCGAGCAATTCGGCGAACACGGGTTCGGCGT
CGGGCTGCGCCGGATCGCCGAGGCGGCCGGGGTGAGCGCCGCGCTGGTGATCCACCACTTCGGCTCCAAGGAGGGCCTGC
GCAAGGCGTGCGACGACCACATCGCCGAGCAGATCCGCGAGAGCAAGACCGAGGCGCTGCAGACCAACGACCCGGCCGTC
TGGTTCGGGCAATTGGCCGAAATCGAGGAATTCGCACCGCTGATCGCCTACGTGCTGCGCAGCATGCAGACCGGCGGCGA
CCTGGCGAAGATGCTGTGGCGCCAGATGATCGAGAACGCCGAGGGATACCTGGAAGAAGGCGTGCGGGCCGGGACGATCA
AACCCAGTCGCGATCCCCGGGCCAGGGCCAAATATCTCGGGATCACCGGAGGCGGCGGACTGCTGCTCTATCTGCAAATG
CATGACAACCCAACCGATTTGCGTGCGGTGTTGCGCGACTATTCGCGCGACATGATCCTGCCCGCCCTCGAGATCTACAC
CGAGGGCCTGATGGCGGACCGCACCATGTACGACGCATTTCTGGCTGCCGAAGATCAAGGAGATTCCCCATGGCAACTGA
CGGTTTTGCGCCCATCGAGATCCGCGGGCTCACCAAGAACTTCGGTGCGGTGCGGGCACTGGACGGTCTCGACCTCACCG
TGCGGGAGGGAGAAGTCCACGGTTTCCTGGGGCCCAACGGCGCCGGCAAGTCGACCACGATCCGCATCCTGCTGGGACTG
GTGA

Upstream 100 bases:

>100_bases
CGGGCCTTGGCGGGCCTCTGCCGGGCCGGCCGCATTTTTACCGATTCTTGACGCGCGCCCCCCTTGACCGCGGGCTGAAC
ATACGTTTAGCGTGCTGAAC

Downstream 100 bases:

>100_bases
AAGCCGACGGCGGCACGGTGCGGCTGCTGGGCGGCGACCCGTGGACCCAGGCCGTCGAACTGCATCGCCAAATCGCTTAT
GTTCCAGGCGATGTCACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulatory Protein; Regulatory Protein TetR; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MRSADLTAAARIRDAAIEQFGEHGFGVGLRRIAEAAGVSAALVIHHFGSKEGLRKACDDHIAEQIRESKTEALQTNDPAV
WFGQLAEIEEFAPLIAYVLRSMQTGGDLAKMLWRQMIENAEGYLEEGVRAGTIKPSRDPRARAKYLGITGGGGLLLYLQM
HDNPTDLRAVLRDYSRDMILPALEIYTEGLMADRTMYDAFLAAEDQGDSPWQLTVLRPSRSAGSPRTSVRCGHWTVSTSP
CGREKSTVSWGPTAPASRPRSASCWDW

Sequences:

>Translated_267_residues
MRSADLTAAARIRDAAIEQFGEHGFGVGLRRIAEAAGVSAALVIHHFGSKEGLRKACDDHIAEQIRESKTEALQTNDPAV
WFGQLAEIEEFAPLIAYVLRSMQTGGDLAKMLWRQMIENAEGYLEEGVRAGTIKPSRDPRARAKYLGITGGGGLLLYLQM
HDNPTDLRAVLRDYSRDMILPALEIYTEGLMADRTMYDAFLAAEDQGDSPWQLTVLRPSRSAGSPRTSVRCGHWTVSTSP
CGREKSTVSWGPTAPASRPRSASCWDW
>Mature_267_residues
MRSADLTAAARIRDAAIEQFGEHGFGVGLRRIAEAAGVSAALVIHHFGSKEGLRKACDDHIAEQIRESKTEALQTNDPAV
WFGQLAEIEEFAPLIAYVLRSMQTGGDLAKMLWRQMIENAEGYLEEGVRAGTIKPSRDPRARAKYLGITGGGGLLLYLQM
HDNPTDLRAVLRDYSRDMILPALEIYTEGLMADRTMYDAFLAAEDQGDSPWQLTVLRPSRSAGSPRTSVRCGHWTVSTSP
CGREKSTVSWGPTAPASRPRSASCWDW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29365; Mature: 29365

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSADLTAAARIRDAAIEQFGEHGFGVGLRRIAEAAGVSAALVIHHFGSKEGLRKACDDH
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHEEHHHHCCCHHHHHHHHHHH
IAEQIRESKTEALQTNDPAVWFGQLAEIEEFAPLIAYVLRSMQTGGDLAKMLWRQMIENA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
EGYLEEGVRAGTIKPSRDPRARAKYLGITGGGGLLLYLQMHDNPTDLRAVLRDYSRDMIL
HHHHHCCCCCCCCCCCCCCHHHHHEEEEECCCCEEEEEEECCCHHHHHHHHHHHCHHHHH
PALEIYTEGLMADRTMYDAFLAAEDQGDSPWQLTVLRPSRSAGSPRTSVRCGHWTVSTSP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEECCEEEECCC
CGREKSTVSWGPTAPASRPRSASCWDW
CCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRSADLTAAARIRDAAIEQFGEHGFGVGLRRIAEAAGVSAALVIHHFGSKEGLRKACDDH
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHEEHHHHCCCHHHHHHHHHHH
IAEQIRESKTEALQTNDPAVWFGQLAEIEEFAPLIAYVLRSMQTGGDLAKMLWRQMIENA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
EGYLEEGVRAGTIKPSRDPRARAKYLGITGGGGLLLYLQMHDNPTDLRAVLRDYSRDMIL
HHHHHCCCCCCCCCCCCCCHHHHHEEEEECCCCEEEEEEECCCHHHHHHHHHHHCHHHHH
PALEIYTEGLMADRTMYDAFLAAEDQGDSPWQLTVLRPSRSAGSPRTSVRCGHWTVSTSP
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEECCEEEECCC
CGREKSTVSWGPTAPASRPRSASCWDW
CCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA