| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408627
Identifier: 41408627
GI number: 41408627
Start: 2841061
End: 2841672
Strand: Direct
Name: 41408627
Synonym: MAP2529
Alternate gene names: NA
Gene position: 2841061-2841672 (Clockwise)
Preceding gene: 41408626
Following gene: 41408628
Centisome position: 58.82
GC content: 65.36
Gene sequence:
>612_bases ATGTCACGCGTGACACCACTTCGTTTCCGGGACTGGCCGCCGGAGATGCGCGACGCGATGGCCGCCCTGATGCCACCCAA TCCGCGCCACCCCGCACCGGTCACCAAGGACCGCCCCAAAGCGGGGAACGCACTGGGGACGTTGGCACACCACCCGTCCC TGGCGCGGGCGTTCTGCACGCTGCAGGGACACCTGCTGATGGGAACCACGCTGAGCATGCGGCACCGCGAAATGCTCATC CTGCGCACCGCCGCCGTGCGTGGATCCGCCTACGAATGGACACATCACAACTTCATTGCGCCCGACGGCGGCATCAGCAC CGAAGATGTCGCGCGGATCGCCTTCGGTCCGACCGCGCCCTATTGGAGCGACTTCGACGCCGCGCTTCTGCGGTCCGTGG ACGAACTCATCCACGACGGCCAAATGAGCGATGCCACGTGGGCCACCCTGTCGAGCGAATTCGGCACCCAGCAACTTCTG GACACCATGTTCACGGTCACTAGCTACGACGCCCTGATGCGCATGCTGAAAACCTGCCAGGTCCGCTTGGAGGACGACGT CCGAGAACTTCGCGCCCAGGCAGGACTTTCCGTCGACGGCGACGGCGCATGA
Upstream 100 bases:
>100_bases AGACGACGCGCGCTACATCACCGGGGTCGCACTACCGGTCGACGGCGGCGCCCTCCTCAAATAAGCAGCCGTACAACACA ACTCGAAAGGATCAGCTTCC
Downstream 100 bases:
>100_bases TCGTGCGTCCCGTGCGGCGTTGCCGCGGCAGACAAGAGGAGTTGATCGATGAGTGATCGGTTCGCGCTGACCGACAGAGT TGCCGTCATCACCGGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Alkylhydroperoxidase; Alkylhydroperoxidase Like Protein; 4-Carboxymuconolactone Decarboxylase
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MSRVTPLRFRDWPPEMRDAMAALMPPNPRHPAPVTKDRPKAGNALGTLAHHPSLARAFCTLQGHLLMGTTLSMRHREMLI LRTAAVRGSAYEWTHHNFIAPDGGISTEDVARIAFGPTAPYWSDFDAALLRSVDELIHDGQMSDATWATLSSEFGTQQLL DTMFTVTSYDALMRMLKTCQVRLEDDVRELRAQAGLSVDGDGA
Sequences:
>Translated_203_residues MSRVTPLRFRDWPPEMRDAMAALMPPNPRHPAPVTKDRPKAGNALGTLAHHPSLARAFCTLQGHLLMGTTLSMRHREMLI LRTAAVRGSAYEWTHHNFIAPDGGISTEDVARIAFGPTAPYWSDFDAALLRSVDELIHDGQMSDATWATLSSEFGTQQLL DTMFTVTSYDALMRMLKTCQVRLEDDVRELRAQAGLSVDGDGA >Mature_202_residues SRVTPLRFRDWPPEMRDAMAALMPPNPRHPAPVTKDRPKAGNALGTLAHHPSLARAFCTLQGHLLMGTTLSMRHREMLIL RTAAVRGSAYEWTHHNFIAPDGGISTEDVARIAFGPTAPYWSDFDAALLRSVDELIHDGQMSDATWATLSSEFGTQQLLD TMFTVTSYDALMRMLKTCQVRLEDDVRELRAQAGLSVDGDGA
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22476; Mature: 22345
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVTPLRFRDWPPEMRDAMAALMPPNPRHPAPVTKDRPKAGNALGTLAHHPSLARAFCT CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHH LQGHLLMGTTLSMRHREMLILRTAAVRGSAYEWTHHNFIAPDGGISTEDVARIAFGPTAP HHCCEEECCHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCHHHHHHHHCCCCCC YWSDFDAALLRSVDELIHDGQMSDATWATLSSEFGTQQLLDTMFTVTSYDALMRMLKTCQ CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH VRLEDDVRELRAQAGLSVDGDGA HHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SRVTPLRFRDWPPEMRDAMAALMPPNPRHPAPVTKDRPKAGNALGTLAHHPSLARAFCT CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHH LQGHLLMGTTLSMRHREMLILRTAAVRGSAYEWTHHNFIAPDGGISTEDVARIAFGPTAP HHCCEEECCHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCHHHHHHHHCCCCCC YWSDFDAALLRSVDELIHDGQMSDATWATLSSEFGTQQLLDTMFTVTSYDALMRMLKTCQ CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH VRLEDDVRELRAQAGLSVDGDGA HHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA