| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is fabG [H]
Identifier: 41408628
GI number: 41408628
Start: 2841721
End: 2842491
Strand: Direct
Name: fabG [H]
Synonym: MAP2530
Alternate gene names: 41408628
Gene position: 2841721-2842491 (Clockwise)
Preceding gene: 41408627
Following gene: 41408629
Centisome position: 58.84
GC content: 65.76
Gene sequence:
>771_bases ATGAGTGATCGGTTCGCGCTGACCGACAGAGTTGCCGTCATCACCGGCGCCGGCACGGGCATCGGCCGGGCCAGCGCCTT GGTGCTGGCCGAGCACGGCGCGGATATCGTGCTGGCCGGACGGCGGCCCGATCCTTTGCAGGCGACGGCCAAGGAGGTCG AGGCGCTCGGACGCCGGGCGTTGATCGTGCCGACCGACGTCACCGAAACCCATCAGTGCCAGGACCTCGTCGATGCCACC CTGGCCGACTTCGGGAGACTCGACATCCTGGTCAACAACGCGGGCGGGGGTGAAACCAAAGGCATCACCAGATGGACCGA GGAAGAGTGGCACGACGTCGTGGACCTCAACCTCGGCAGTGTGTGGTTCCTGTCGAGGTGCGCAGTGAAGCCGATGATGA CACAAGGCAGCGGTGCGATCGTCAACATCTCCTCCGGCGCGAGCCTGATCGCCATGCCGCAGGCCGCCATCTATGCCGCC GCCAAGGCCGGCGTGAACAACCTCACCGGGTCAATGGCCGCGGCCTGGGGACGAAAGGGCATCCGGGTCAATTGCATTGC CTGCGGAGCCATCCGAACAGACGGACTGCTGGCAGACGCAGCGAAAGGCGGATTCGACGTCGACCAGCTGGGCGCCATGA ACGCCATGGGGCGAATAGCCGAACCCGATGAAATCGGCTACGGCGTCCTCTTCTTCGCCTCCGACGCAAGCAGCTACTGC TCGGGCCAAACCCTGTACATCCACGGCGGCCCCGGTCCCGCCGGCATCTGA
Upstream 100 bases:
>100_bases CCGAGAACTTCGCGCCCAGGCAGGACTTTCCGTCGACGGCGACGGCGCATGATCGTGCGTCCCGTGCGGCGTTGCCGCGG CAGACAAGAGGAGTTGATCG
Downstream 100 bases:
>100_bases ATCAATCCTGACACCCCAAAGCAAGGAGCATCTCAATGACAACCACCGACATCGACCTCGAAGCACTGCGCCGCGACCTG CAGTACGTCAAGGACAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSDRFALTDRVAVITGAGTGIGRASALVLAEHGADIVLAGRRPDPLQATAKEVEALGRRALIVPTDVTETHQCQDLVDAT LADFGRLDILVNNAGGGETKGITRWTEEEWHDVVDLNLGSVWFLSRCAVKPMMTQGSGAIVNISSGASLIAMPQAAIYAA AKAGVNNLTGSMAAAWGRKGIRVNCIACGAIRTDGLLADAAKGGFDVDQLGAMNAMGRIAEPDEIGYGVLFFASDASSYC SGQTLYIHGGPGPAGI
Sequences:
>Translated_256_residues MSDRFALTDRVAVITGAGTGIGRASALVLAEHGADIVLAGRRPDPLQATAKEVEALGRRALIVPTDVTETHQCQDLVDAT LADFGRLDILVNNAGGGETKGITRWTEEEWHDVVDLNLGSVWFLSRCAVKPMMTQGSGAIVNISSGASLIAMPQAAIYAA AKAGVNNLTGSMAAAWGRKGIRVNCIACGAIRTDGLLADAAKGGFDVDQLGAMNAMGRIAEPDEIGYGVLFFASDASSYC SGQTLYIHGGPGPAGI >Mature_255_residues SDRFALTDRVAVITGAGTGIGRASALVLAEHGADIVLAGRRPDPLQATAKEVEALGRRALIVPTDVTETHQCQDLVDATL ADFGRLDILVNNAGGGETKGITRWTEEEWHDVVDLNLGSVWFLSRCAVKPMMTQGSGAIVNISSGASLIAMPQAAIYAAA KAGVNNLTGSMAAAWGRKGIRVNCIACGAIRTDGLLADAAKGGFDVDQLGAMNAMGRIAEPDEIGYGVLFFASDASSYCS GQTLYIHGGPGPAGI
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI19923817, Length=251, Percent_Identity=32.2709163346614, Blast_Score=131, Evalue=6e-31, Organism=Homo sapiens, GI10190704, Length=248, Percent_Identity=34.6774193548387, Blast_Score=107, Evalue=9e-24, Organism=Homo sapiens, GI32483357, Length=257, Percent_Identity=30.7392996108949, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI15277342, Length=254, Percent_Identity=31.1023622047244, Blast_Score=98, Evalue=7e-21, Organism=Homo sapiens, GI40254992, Length=242, Percent_Identity=28.9256198347107, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI59889578, Length=195, Percent_Identity=32.3076923076923, Blast_Score=95, Evalue=7e-20, Organism=Homo sapiens, GI66933014, Length=253, Percent_Identity=31.2252964426877, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI4503301, Length=244, Percent_Identity=29.5081967213115, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI5031737, Length=245, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI7705925, Length=253, Percent_Identity=28.8537549407115, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI31542939, Length=191, Percent_Identity=34.0314136125654, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI7706318, Length=199, Percent_Identity=30.6532663316583, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI209862901, Length=204, Percent_Identity=31.8627450980392, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI19923983, Length=204, Percent_Identity=31.8627450980392, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI4504505, Length=187, Percent_Identity=32.620320855615, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI4557649, Length=187, Percent_Identity=31.0160427807487, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI126723750, Length=257, Percent_Identity=26.0700389105058, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI33667109, Length=200, Percent_Identity=30.5, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI226371731, Length=180, Percent_Identity=29.4444444444444, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI224922801, Length=169, Percent_Identity=34.3195266272189, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI126723191, Length=190, Percent_Identity=30.5263157894737, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI7705855, Length=207, Percent_Identity=28.0193236714976, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI109715829, Length=234, Percent_Identity=24.3589743589744, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI20149619, Length=234, Percent_Identity=29.0598290598291, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI40254986, Length=182, Percent_Identity=30.2197802197802, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4758504, Length=252, Percent_Identity=30.1587301587302, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI142976729, Length=225, Percent_Identity=23.1111111111111, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1789208, Length=250, Percent_Identity=38, Blast_Score=144, Evalue=4e-36, Organism=Escherichia coli, GI1787335, Length=243, Percent_Identity=35.8024691358025, Blast_Score=135, Evalue=3e-33, Organism=Escherichia coli, GI1790717, Length=253, Percent_Identity=30.4347826086957, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI1787905, Length=250, Percent_Identity=34.4, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI87082100, Length=250, Percent_Identity=32.4, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI1788459, Length=249, Percent_Identity=31.3253012048193, Blast_Score=107, Evalue=5e-25, Organism=Escherichia coli, GI1789378, Length=246, Percent_Identity=30.4878048780488, Blast_Score=107, Evalue=9e-25, Organism=Escherichia coli, GI87082160, Length=248, Percent_Identity=31.0483870967742, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI2367175, Length=250, Percent_Identity=32, Blast_Score=94, Evalue=6e-21, Organism=Escherichia coli, GI1786812, Length=245, Percent_Identity=29.7959183673469, Blast_Score=87, Evalue=8e-19, Organism=Escherichia coli, GI1787526, Length=191, Percent_Identity=28.7958115183246, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1789057, Length=254, Percent_Identity=25.1968503937008, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1787820, Length=184, Percent_Identity=26.6304347826087, Blast_Score=65, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17560332, Length=262, Percent_Identity=35.1145038167939, Blast_Score=126, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17551412, Length=280, Percent_Identity=34.2857142857143, Blast_Score=124, Evalue=4e-29, Organism=Caenorhabditis elegans, GI17559104, Length=264, Percent_Identity=35.2272727272727, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17560676, Length=254, Percent_Identity=35.0393700787402, Blast_Score=121, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17562910, Length=268, Percent_Identity=35.0746268656716, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=33.6032388663968, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17562906, Length=256, Percent_Identity=33.59375, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17538480, Length=268, Percent_Identity=32.8358208955224, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI71994604, Length=250, Percent_Identity=29.6, Blast_Score=113, Evalue=9e-26, Organism=Caenorhabditis elegans, GI17560150, Length=259, Percent_Identity=32.4324324324324, Blast_Score=112, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17538486, Length=265, Percent_Identity=34.3396226415094, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71994600, Length=253, Percent_Identity=30.8300395256917, Blast_Score=110, Evalue=8e-25, Organism=Caenorhabditis elegans, GI17562904, Length=269, Percent_Identity=30.8550185873606, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17562990, Length=255, Percent_Identity=32.5490196078431, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17544670, Length=261, Percent_Identity=31.4176245210728, Blast_Score=107, Evalue=9e-24, Organism=Caenorhabditis elegans, GI17562908, Length=266, Percent_Identity=31.9548872180451, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI193204405, Length=264, Percent_Identity=31.8181818181818, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17536025, Length=250, Percent_Identity=30, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17536651, Length=250, Percent_Identity=28.8, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17531453, Length=270, Percent_Identity=32.5925925925926, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17565030, Length=274, Percent_Identity=33.2116788321168, Blast_Score=103, Evalue=9e-23, Organism=Caenorhabditis elegans, GI17560220, Length=259, Percent_Identity=31.6602316602317, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI25147288, Length=250, Percent_Identity=33.6, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17561402, Length=253, Percent_Identity=30.8300395256917, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI72000259, Length=267, Percent_Identity=29.9625468164794, Blast_Score=101, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17563726, Length=264, Percent_Identity=30.3030303030303, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI115534694, Length=254, Percent_Identity=29.5275590551181, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17561272, Length=250, Percent_Identity=30, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17555612, Length=208, Percent_Identity=29.3269230769231, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71997099, Length=206, Percent_Identity=29.6116504854369, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI193203117, Length=186, Percent_Identity=27.9569892473118, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI193203115, Length=165, Percent_Identity=29.6969696969697, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI86565303, Length=265, Percent_Identity=27.1698113207547, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17568967, Length=204, Percent_Identity=29.4117647058824, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17508651, Length=245, Percent_Identity=26.1224489795918, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322861, Length=196, Percent_Identity=33.1632653061224, Blast_Score=97, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6323882, Length=194, Percent_Identity=29.8969072164948, Blast_Score=84, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6324126, Length=246, Percent_Identity=27.2357723577236, Blast_Score=83, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6322226, Length=188, Percent_Identity=29.2553191489362, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI28571526, Length=253, Percent_Identity=34.3873517786561, Blast_Score=135, Evalue=4e-32, Organism=Drosophila melanogaster, GI21357041, Length=253, Percent_Identity=33.596837944664, Blast_Score=132, Evalue=2e-31, Organism=Drosophila melanogaster, GI24644339, Length=249, Percent_Identity=32.5301204819277, Blast_Score=126, Evalue=1e-29, Organism=Drosophila melanogaster, GI23397609, Length=253, Percent_Identity=35.5731225296443, Blast_Score=126, Evalue=1e-29, Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=33.6, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI21355319, Length=245, Percent_Identity=30.6122448979592, Blast_Score=107, Evalue=6e-24, Organism=Drosophila melanogaster, GI24584752, Length=186, Percent_Identity=33.8709677419355, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI24644337, Length=252, Percent_Identity=31.7460317460317, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI24580925, Length=198, Percent_Identity=34.3434343434343, Blast_Score=91, Evalue=5e-19, Organism=Drosophila melanogaster, GI21358495, Length=232, Percent_Identity=30.1724137931034, Blast_Score=91, Evalue=6e-19, Organism=Drosophila melanogaster, GI24643142, Length=253, Percent_Identity=30.8300395256917, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI18859837, Length=201, Percent_Identity=30.3482587064677, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI17737361, Length=255, Percent_Identity=28.6274509803922, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI24584744, Length=188, Percent_Identity=29.2553191489362, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28574402, Length=188, Percent_Identity=29.2553191489362, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI21357673, Length=191, Percent_Identity=30.8900523560209, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24584748, Length=185, Percent_Identity=28.1081081081081, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI161076933, Length=185, Percent_Identity=28.1081081081081, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24640442, Length=195, Percent_Identity=27.6923076923077, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI21355631, Length=198, Percent_Identity=27.7777777777778, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI24649181, Length=155, Percent_Identity=29.6774193548387, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI24640492, Length=165, Percent_Identity=28.4848484848485, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26459; Mature: 26328
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRFALTDRVAVITGAGTGIGRASALVLAEHGADIVLAGRRPDPLQATAKEVEALGRRA CCCCEEECCEEEEEEECCCCCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCEE LIVPTDVTETHQCQDLVDATLADFGRLDILVNNAGGGETKGITRWTEEEWHDVVDLNLGS EEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHEEECCCCH VWFLSRCAVKPMMTQGSGAIVNISSGASLIAMPQAAIYAAAKAGVNNLTGSMAAAWGRKG HHHHHHHHCCCCEECCCCEEEEECCCCEEEECCHHHHHHHHHCCCCCCCHHHHHHHCCCC IRVNCIACGAIRTDGLLADAAKGGFDVDQLGAMNAMGRIAEPDEIGYGVLFFASDASSYC CEEEEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHC SGQTLYIHGGPGPAGI CCCEEEEECCCCCCCC >Mature Secondary Structure SDRFALTDRVAVITGAGTGIGRASALVLAEHGADIVLAGRRPDPLQATAKEVEALGRRA CCCEEECCEEEEEEECCCCCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCEE LIVPTDVTETHQCQDLVDATLADFGRLDILVNNAGGGETKGITRWTEEEWHDVVDLNLGS EEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHEEECCCCH VWFLSRCAVKPMMTQGSGAIVNISSGASLIAMPQAAIYAAAKAGVNNLTGSMAAAWGRKG HHHHHHHHCCCCEECCCCEEEEECCCCEEEECCHHHHHHHHHCCCCCCCHHHHHHHCCCC IRVNCIACGAIRTDGLLADAAKGGFDVDQLGAMNAMGRIAEPDEIGYGVLFFASDASSYC CEEEEEEECCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHC SGQTLYIHGGPGPAGI CCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8759840; 9384377; 9534248; 8654983 [H]