| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408489
Identifier: 41408489
GI number: 41408489
Start: 2687667
End: 2688002
Strand: Direct
Name: 41408489
Synonym: MAP2391
Alternate gene names: NA
Gene position: 2687667-2688002 (Clockwise)
Preceding gene: 41408482
Following gene: 41408492
Centisome position: 55.65
GC content: 67.26
Gene sequence:
>336_bases GTGGCGAGGGCCACGCCGGCGCCATGTTTGCCCCCGGCGGGACGACGGGAACGTCCGTGGAAAGAACCGACCATCATGGG GGAAGGAGACGCAATGGTTGACGTCAAGAGCGGCCCGGTCGAGCTGGTGCAGGGCATCGTCGACGACGTGCTGGGCAGGG CCAAGCAGGTCATCGGCATCATCATCGGCCACAACGGCCTGATCGAGCAGGGCAAGGCCCAGCAGGACAAGGCGGATGCT CAGCGCAGCGCCGGCAAGAAGGAAGCCGCCGCCGAGAAGGCCCGGGGCAAGGCCAAGGCCTACGAGCAGCGCGAACGGGC CGAACAGCAACAGTGA
Upstream 100 bases:
>100_bases GTATGGCGCGCTTGAACCGGGACTAATCTGCGATTTTCGCCGCGCCGGCCTCCGGGTACCGCCGCTCGCTGACGGCCCGG CCGCGCGGAGCGCAGTCGTT
Downstream 100 bases:
>100_bases GTGACGCGAGGCGGGCCCGGTCGATGACCGGGCCCGTTTCCGTGTAACCCCTTCTACCGCAACGCCGTTGCCAGGAGGCC CAGCCGCTGGTAGGCGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MARATPAPCLPPAGRRERPWKEPTIMGEGDAMVDVKSGPVELVQGIVDDVLGRAKQVIGIIIGHNGLIEQGKAQQDKADA QRSAGKKEAAAEKARGKAKAYEQRERAEQQQ
Sequences:
>Translated_111_residues MARATPAPCLPPAGRRERPWKEPTIMGEGDAMVDVKSGPVELVQGIVDDVLGRAKQVIGIIIGHNGLIEQGKAQQDKADA QRSAGKKEAAAEKARGKAKAYEQRERAEQQQ >Mature_110_residues ARATPAPCLPPAGRRERPWKEPTIMGEGDAMVDVKSGPVELVQGIVDDVLGRAKQVIGIIIGHNGLIEQGKAQQDKADAQ RSAGKKEAAAEKARGKAKAYEQRERAEQQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11954; Mature: 11823
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARATPAPCLPPAGRRERPWKEPTIMGEGDAMVDVKSGPVELVQGIVDDVLGRAKQVIGI CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH IIGHNGLIEQGKAQQDKADAQRSAGKKEAAAEKARGKAKAYEQRERAEQQQ HCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ARATPAPCLPPAGRRERPWKEPTIMGEGDAMVDVKSGPVELVQGIVDDVLGRAKQVIGI CCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH IIGHNGLIEQGKAQQDKADAQRSAGKKEAAAEKARGKAKAYEQRERAEQQQ HCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA