Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41408452

Identifier: 41408452

GI number: 41408452

Start: 2645469

End: 2646299

Strand: Direct

Name: 41408452

Synonym: MAP2354

Alternate gene names: NA

Gene position: 2645469-2646299 (Clockwise)

Preceding gene: 41408451

Following gene: 41408453

Centisome position: 54.77

GC content: 69.43

Gene sequence:

>831_bases
ATGACCGAGTCGGCTCCGGCCGAACTGGCGGCCAACCCGTTAGCCGACGGAATCCCGTTCGGCGCCAAGCTGCAACAGCT
CGCCGGGCAACGCGGCGACGACACGGCGGTGACCGTCGTCGCGCTCGACGGCACCGCCACCTCGCTGACGTTCGCCGAGC
TCGACGCCCGCGCCAACCAGTGGGGCCGGGCCCTGGCCGCCACCGGCGCCCAAACGGGTTCGCTTGTCGCACTTGCCATT
CCCAACTCGCAGCATCTGGTGCTGGCCACGCTGGGGTGCTGGAAGATCGGCGCGGTGCCCGTGCCCATGCACTGGGACCT
TCCCGAGTGGGAACGCGACCGGGTGCGCGAGGTGATCGACCCCGCCGTCGTCGTCGACGAAACGAGCCGCTGGGGGCTCG
AGGCGCGCGCGGCCGGCGAGTCCGAGGCCGCCCTGCCGGTCGCCGTCTCCCCCACCGCCAACGGCATCTGCAGCAGCGGT
TCCACCGGGGTGCCCAAGGTGATCCTCAACCTGGCGCCCTCGCTGTGGATCCCGCAGCACGGTGAGCCGTTCCTGTCGAA
CTGGACGCCGGTGGCCCAGCCGCAGACCATCATGGTGCCCGCACCGATGTATCACACCAACGGCTTCGCCCCGCTGCTCA
TGCTGCTGGGCGGCGACCATCTGGTGATCCTCGAAAAGTTCGATGCCGCATTGGTTCTCGACGTGATCGAGCGCTTCCGG
ATCACCAACTTCACCGCCACACCCACCATGCTGGCCCGCATCGCAGCCCGGCCCGATGTCCGGCAGCGCGACCTGTCCAG
CATCGTGTTCATTCTGCAGGGGCCGCGGTGA

Upstream 100 bases:

>100_bases
TGATCCGGCTGCCGCTGAGCACCGAGGAACTCGCGCTGCGGCTGATCCCAAGCGTGGCCGACGGCGCCTTCGAGACGCTG
TTCAGCGAGCCGGTGTCGGC

Downstream 100 bases:

>100_bases
TGCCGCCATCGCTGCTGCACACCTGGTTCGAGCTGCTGTCCCCCGAGCAGATCGTGATGGCCTACGGCATGACCGAAAAC
CTGGGGCTGACCGCGCTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Acid-CoA Ligase; Acyl-CoA Synthetase; Non-Ribosomal Peptide Synthetase; Acyl-CoA Ligase; Acetyl-CoA Synthetase; Bile Acid-Co A Ligase; Long-Chain-Fatty-Acid-CoA Ligase; Fatty-Acid-CoA Ligase; Long-Chain Fatty-Acid-CoA Ligase; Feruloyl-CoA Synthetase; Acyl-CoA Synthetase/AMP-Acid Ligase I; Amino Acid Adenylation /Thioester Reductase Family Protein; O-Succinylbenzoate-CoA Ligase; AMP-Dependent Synthetase; Acyl-CoA Synthase

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MTESAPAELAANPLADGIPFGAKLQQLAGQRGDDTAVTVVALDGTATSLTFAELDARANQWGRALAATGAQTGSLVALAI
PNSQHLVLATLGCWKIGAVPVPMHWDLPEWERDRVREVIDPAVVVDETSRWGLEARAAGESEAALPVAVSPTANGICSSG
STGVPKVILNLAPSLWIPQHGEPFLSNWTPVAQPQTIMVPAPMYHTNGFAPLLMLLGGDHLVILEKFDAALVLDVIERFR
ITNFTATPTMLARIAARPDVRQRDLSSIVFILQGPR

Sequences:

>Translated_276_residues
MTESAPAELAANPLADGIPFGAKLQQLAGQRGDDTAVTVVALDGTATSLTFAELDARANQWGRALAATGAQTGSLVALAI
PNSQHLVLATLGCWKIGAVPVPMHWDLPEWERDRVREVIDPAVVVDETSRWGLEARAAGESEAALPVAVSPTANGICSSG
STGVPKVILNLAPSLWIPQHGEPFLSNWTPVAQPQTIMVPAPMYHTNGFAPLLMLLGGDHLVILEKFDAALVLDVIERFR
ITNFTATPTMLARIAARPDVRQRDLSSIVFILQGPR
>Mature_275_residues
TESAPAELAANPLADGIPFGAKLQQLAGQRGDDTAVTVVALDGTATSLTFAELDARANQWGRALAATGAQTGSLVALAIP
NSQHLVLATLGCWKIGAVPVPMHWDLPEWERDRVREVIDPAVVVDETSRWGLEARAAGESEAALPVAVSPTANGICSSGS
TGVPKVILNLAPSLWIPQHGEPFLSNWTPVAQPQTIMVPAPMYHTNGFAPLLMLLGGDHLVILEKFDAALVLDVIERFRI
TNFTATPTMLARIAARPDVRQRDLSSIVFILQGPR

Specific function: Unknown

COG id: COG0318

COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29371; Mature: 29240

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESAPAELAANPLADGIPFGAKLQQLAGQRGDDTAVTVVALDGTATSLTFAELDARANQ
CCCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHHH
WGRALAATGAQTGSLVALAIPNSQHLVLATLGCWKIGAVPVPMHWDLPEWERDRVREVID
HHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCEECCEECCCCCCCCCHHHHHHHHHHC
PAVVVDETSRWGLEARAAGESEAALPVAVSPTANGICSSGSTGVPKVILNLAPSLWIPQH
CEEEEECCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC
GEPFLSNWTPVAQPQTIMVPAPMYHTNGFAPLLMLLGGDHLVILEKFDAALVLDVIERFR
CCHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHH
ITNFTATPTMLARIAARPDVRQRDLSSIVFILQGPR
HCCCCCCHHHHHHHHCCCCHHHHCCCEEEEEEECCC
>Mature Secondary Structure 
TESAPAELAANPLADGIPFGAKLQQLAGQRGDDTAVTVVALDGTATSLTFAELDARANQ
CCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHHH
WGRALAATGAQTGSLVALAIPNSQHLVLATLGCWKIGAVPVPMHWDLPEWERDRVREVID
HHHHHHHCCCCCCCEEEEEECCCCEEEEEEECCCEECCEECCCCCCCCCHHHHHHHHHHC
PAVVVDETSRWGLEARAAGESEAALPVAVSPTANGICSSGSTGVPKVILNLAPSLWIPQH
CEEEEECCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC
GEPFLSNWTPVAQPQTIMVPAPMYHTNGFAPLLMLLGGDHLVILEKFDAALVLDVIERFR
CCHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHH
ITNFTATPTMLARIAARPDVRQRDLSSIVFILQGPR
HCCCCCCHHHHHHHHCCCCHHHHCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA