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The map label for this gene is acdA [H]

Identifier: 41408448

GI number: 41408448

Start: 2641129

End: 2642262

Strand: Direct

Name: acdA [H]

Synonym: MAP2350

Alternate gene names: 41408448

Gene position: 2641129-2642262 (Clockwise)

Preceding gene: 41408446

Following gene: 41408449

Centisome position: 54.68

GC content: 73.28

Gene sequence:

>1134_bases
GTGAGATTCGGTGCGATTGCACCCGCCCGGCTAGTTTATTATTTTTACTATGTTAGAGGTCTTATGGATGTCGGACTGAA
CTCGGAGCAGTTGTCGCTGCGCGACGCCGTGCGCGACATATTACGGACGGAATGTCCGCCCGACGCCGCCCGGCAAGCGA
TCACCGATCCGGAGCGCTGGCGCGCCCTGTGGAAGACGGTCGTCGACCTGGGCTGGACCGAGCTGGCCGCCGCGAACACC
GGCGACTACGGACCGATGGAACTGGTCGTGGTTCTCGAGGAGTGCGGTGCCGCCATCGCGCCGATCCCGTTGTTGTGCAG
CGTCGGTCTGGCCGCCGGGCTGTTGCGCGGCAGCGGCCTCGACCTGGTCCTGGCCGACATCGCCGGCGGCGCCGTCGCCA
CCGTGGCCGTCCACGCCGAAAAGTCCCGGCTGCCCGGGGTGCCGATGACGCTGCGGCAGGGGCGGCTGCGCGGTCGCGCG
GTCGCGGTGCCCAACCTGGCGCGCGCGGAGCTTCTCGTCACGCTGGCCCGAACCGACGACGGCGGCACGGTGGCCGCGGT
CGCCCGGTGCGGCGACGGGGTCACCGCGCTGCCCGCGGCCGAGTGCACCGATCCCGCCCAGCCGTTGGCCGGGGTGCAGA
TCGACGCCGAGCCGGTCGCGGTGGCGCCGGTCGACCTCGAGTCGGCGCTGCCGGCGCCGTGGGTGGCGTGCGCCGCCGAC
CTGGTGGGGGTGGCCGGCGCGGCGCTGCGCCGCTCCGTCGAGCACGCCAAGACGCGCCGCCAATTCGGCAAGCCGATCGG
CGCGTTCCAGGGCGTCAAACATGCGCTGGCCGACAACTACGTCAGCGTGGAACGCGCCCGCAGCCTCACCTACGCCGCGG
CGGCCCGGCTCGCCGATCCCGGCACGGCGCCCGGCGATGCGTGGACCGCGGCGGCCCTGGCCAAGGCGGCGGCCGGTGAG
GCGGCCACCGGTTGCGCGCGCACCGCGGTCCAGGTGCACGGCGCGCTCGGGCAGACGTGGGAGCACGACGCGCATCTCTA
TGTCCGGCATGCCTGGCAGACCGCCGCCCTGCTGGGCGACAGCCGCGCGCTCTACCACGAGGTGGGCCGCCGGTTCTGCG
GAGGCGCGGCGTGA

Upstream 100 bases:

>100_bases
ACTGGCCTCGGCGCGGCGCGCCCGTTCCGCGATGTCGGCGGCCGACAACCGGACCTGGGGCAGGAACAGATACCACTCGA
CCATACGCGTCACCTCAAGC

Downstream 100 bases:

>100_bases
CGAGCGGGGTAAGCACTCGATCCGAGGTGGTCGCCGAGTTCGCGGCCTGGCTGGCGGCGTTCCTGCCGAATGACTATTAC
GAGAACTACCGGCGGTACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MRFGAIAPARLVYYFYYVRGLMDVGLNSEQLSLRDAVRDILRTECPPDAARQAITDPERWRALWKTVVDLGWTELAAANT
GDYGPMELVVVLEECGAAIAPIPLLCSVGLAAGLLRGSGLDLVLADIAGGAVATVAVHAEKSRLPGVPMTLRQGRLRGRA
VAVPNLARAELLVTLARTDDGGTVAAVARCGDGVTALPAAECTDPAQPLAGVQIDAEPVAVAPVDLESALPAPWVACAAD
LVGVAGAALRRSVEHAKTRRQFGKPIGAFQGVKHALADNYVSVERARSLTYAAAARLADPGTAPGDAWTAAALAKAAAGE
AATGCARTAVQVHGALGQTWEHDAHLYVRHAWQTAALLGDSRALYHEVGRRFCGGAA

Sequences:

>Translated_377_residues
MRFGAIAPARLVYYFYYVRGLMDVGLNSEQLSLRDAVRDILRTECPPDAARQAITDPERWRALWKTVVDLGWTELAAANT
GDYGPMELVVVLEECGAAIAPIPLLCSVGLAAGLLRGSGLDLVLADIAGGAVATVAVHAEKSRLPGVPMTLRQGRLRGRA
VAVPNLARAELLVTLARTDDGGTVAAVARCGDGVTALPAAECTDPAQPLAGVQIDAEPVAVAPVDLESALPAPWVACAAD
LVGVAGAALRRSVEHAKTRRQFGKPIGAFQGVKHALADNYVSVERARSLTYAAAARLADPGTAPGDAWTAAALAKAAAGE
AATGCARTAVQVHGALGQTWEHDAHLYVRHAWQTAALLGDSRALYHEVGRRFCGGAA
>Mature_377_residues
MRFGAIAPARLVYYFYYVRGLMDVGLNSEQLSLRDAVRDILRTECPPDAARQAITDPERWRALWKTVVDLGWTELAAANT
GDYGPMELVVVLEECGAAIAPIPLLCSVGLAAGLLRGSGLDLVLADIAGGAVATVAVHAEKSRLPGVPMTLRQGRLRGRA
VAVPNLARAELLVTLARTDDGGTVAAVARCGDGVTALPAAECTDPAQPLAGVQIDAEPVAVAPVDLESALPAPWVACAAD
LVGVAGAALRRSVEHAKTRRQFGKPIGAFQGVKHALADNYVSVERARSLTYAAAARLADPGTAPGDAWTAAALAKAAAGE
AATGCARTAVQVHGALGQTWEHDAHLYVRHAWQTAALLGDSRALYHEVGRRFCGGAA

Specific function: Involved in the degradation of long-chain fatty acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Drosophila melanogaster, GI21356377, Length=210, Percent_Identity=27.6190476190476, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 39253; Mature: 39253

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFGAIAPARLVYYFYYVRGLMDVGLNSEQLSLRDAVRDILRTECPPDAARQAITDPERW
CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHH
RALWKTVVDLGWTELAAANTGDYGPMELVVVLEECGAAIAPIPLLCSVGLAAGLLRGSGL
HHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
DLVLADIAGGAVATVAVHAEKSRLPGVPMTLRQGRLRGRAVAVPNLARAELLVTLARTDD
CEEEEECCCCCEEEEEEEEHHHCCCCCCHHHHHCCCCCCEEECCCHHHHHHEEEEEECCC
GGTVAAVARCGDGVTALPAAECTDPAQPLAGVQIDAEPVAVAPVDLESALPAPWVACAAD
CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEECCCHHHCCCCHHHHHHHH
LVGVAGAALRRSVEHAKTRRQFGKPIGAFQGVKHALADNYVSVERARSLTYAAAARLADP
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
GTAPGDAWTAAALAKAAAGEAATGCARTAVQVHGALGQTWEHDAHLYVRHAWQTAALLGD
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHCC
SRALYHEVGRRFCGGAA
CHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRFGAIAPARLVYYFYYVRGLMDVGLNSEQLSLRDAVRDILRTECPPDAARQAITDPERW
CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHH
RALWKTVVDLGWTELAAANTGDYGPMELVVVLEECGAAIAPIPLLCSVGLAAGLLRGSGL
HHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCC
DLVLADIAGGAVATVAVHAEKSRLPGVPMTLRQGRLRGRAVAVPNLARAELLVTLARTDD
CEEEEECCCCCEEEEEEEEHHHCCCCCCHHHHHCCCCCCEEECCCHHHHHHEEEEEECCC
GGTVAAVARCGDGVTALPAAECTDPAQPLAGVQIDAEPVAVAPVDLESALPAPWVACAAD
CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEECCCHHHCCCCHHHHHHHH
LVGVAGAALRRSVEHAKTRRQFGKPIGAFQGVKHALADNYVSVERARSLTYAAAARLADP
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
GTAPGDAWTAAALAKAAAGEAATGCARTAVQVHGALGQTWEHDAHLYVRHAWQTAALLGD
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHCC
SRALYHEVGRRFCGGAA
CHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]