| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is entB
Identifier: 41408357
GI number: 41408357
Start: 2523980
End: 2524522
Strand: Direct
Name: entB
Synonym: MAP2259
Alternate gene names: 41408357
Gene position: 2523980-2524522 (Clockwise)
Preceding gene: 41408355
Following gene: 41408358
Centisome position: 52.26
GC content: 64.83
Gene sequence:
>543_bases ATGAGCGACACTGCTGTGTTGGTGGTCGACATGATGAATTCGTATCAGCATCCCGACGCTGAAAATCTAATACCCAACGT CGAGAAGATCATCGAGCCGTTGACCGGTCTGGTGCGCCGGGCCCGCGAATCCGCCGGCGTCGACCTGGTGTACGTCAACG ACAACTACGGCGATTTCACCGCCCAGTTCTCCGATCTGGTCCGCTCGGCGCTCGACGGCGCCCGGCCGGACCTGGTGAAG CCGATCGCCCCGGTCTCGGGCGAAGCCGCCAGCCTGACCAAGGTCCGTCACAGCGCGTTCTATTCGACCGCGCTGGCTTA CCTGCTGAGCCGGTTGGGCACCAAGCGGCTGATCATCACCGGGCAGGTCACCGAGCAGTGCATCCTCTACACGGCCCTGG ACGCCTACGTGCGGCACTTCCCCGTCGTCATCCCGACGGATGCGGTCGCACACATCGACCCCGAGCTGGGCGCGGCGGCC TGCAAGATGATGGAGCAGAACATGTCCGCCGAGCTGACGACGGCGGCGGGCTGCCTCGGCTGA
Upstream 100 bases:
>100_bases ACGCGGGCGAAGCCCTGGCTGTAAGCGTTGTAAAAGTCCATCGCCCTTCCATTGTCGCCCCAGGCGTGTCAACTGCTGGC CGCCGGGTATCCCGGACGGC
Downstream 100 bases:
>100_bases CTCGTACCCTGAACAACGTGACGGTCGGCCGCGCGGAATCCCCGGAACTGGTGGCGGTGCTGGCCGGTCGGCGGATCGCG GTACTGACCGGTGCGGGCAT
Product: EntB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSDTAVLVVDMMNSYQHPDAENLIPNVEKIIEPLTGLVRRARESAGVDLVYVNDNYGDFTAQFSDLVRSALDGARPDLVK PIAPVSGEAASLTKVRHSAFYSTALAYLLSRLGTKRLIITGQVTEQCILYTALDAYVRHFPVVIPTDAVAHIDPELGAAA CKMMEQNMSAELTTAAGCLG
Sequences:
>Translated_180_residues MSDTAVLVVDMMNSYQHPDAENLIPNVEKIIEPLTGLVRRARESAGVDLVYVNDNYGDFTAQFSDLVRSALDGARPDLVK PIAPVSGEAASLTKVRHSAFYSTALAYLLSRLGTKRLIITGQVTEQCILYTALDAYVRHFPVVIPTDAVAHIDPELGAAA CKMMEQNMSAELTTAAGCLG >Mature_179_residues SDTAVLVVDMMNSYQHPDAENLIPNVEKIIEPLTGLVRRARESAGVDLVYVNDNYGDFTAQFSDLVRSALDGARPDLVKP IAPVSGEAASLTKVRHSAFYSTALAYLLSRLGTKRLIITGQVTEQCILYTALDAYVRHFPVVIPTDAVAHIDPELGAAAC KMMEQNMSAELTTAAGCLG
Specific function: Unknown
COG id: COG1335
COG function: function code Q; Amidases related to nicotinamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isochorismatase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000868 [H]
Pfam domain/function: PF00857 Isochorismatase [H]
EC number: NA
Molecular weight: Translated: 19413; Mature: 19282
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTAVLVVDMMNSYQHPDAENLIPNVEKIIEPLTGLVRRARESAGVDLVYVNDNYGDFT CCCCCEEHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHH AQFSDLVRSALDGARPDLVKPIAPVSGEAASLTKVRHSAFYSTALAYLLSRLGTKRLIIT HHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE GQVTEQCILYTALDAYVRHFPVVIPTDAVAHIDPELGAAACKMMEQNMSAELTTAAGCLG CCHHHHHHHHHHHHHHHHHCCEEECCCHHHHCCCHHHHHHHHHHHHCCCCHHHHHHCCCC >Mature Secondary Structure SDTAVLVVDMMNSYQHPDAENLIPNVEKIIEPLTGLVRRARESAGVDLVYVNDNYGDFT CCCCEEHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHH AQFSDLVRSALDGARPDLVKPIAPVSGEAASLTKVRHSAFYSTALAYLLSRLGTKRLIIT HHHHHHHHHHHCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE GQVTEQCILYTALDAYVRHFPVVIPTDAVAHIDPELGAAACKMMEQNMSAELTTAAGCLG CCHHHHHHHHHHHHHHHHHCCEEECCCHHHHCCCHHHHHHHHHHHHCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]