| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408355
Identifier: 41408355
GI number: 41408355
Start: 2521332
End: 2521829
Strand: Direct
Name: 41408355
Synonym: MAP2257
Alternate gene names: NA
Gene position: 2521332-2521829 (Clockwise)
Preceding gene: 41408354
Following gene: 41408357
Centisome position: 52.2
GC content: 68.07
Gene sequence:
>498_bases TTGGCAGTGTTTGGCAGCGTAGCGCGTCGATCTGGCAGTGGTGGGCGAGCAGCCTCGGTGGTGACCTGTCAGCCATCGGA AAGGAAAATCATGTCCGCCACCACGATTGACCGCACCACCGGCCGGGACGGTTTGCTCCGCCTGGCCATGCGCGCCGACG CCGCCATCAGCGGGCTGGTCGGCCTGGCCGGTATCCCGCTGGTCGGCTGGCTCGCCGAGGTGTCCGGCACCACCACGGCC TTCGAGTACGGCATGTCCGCGTTCTTGATCGGTTACGGCGTGCTGGTGTTCGGGCTGGCCGCGCTGCCCTCGGTGCGCCG CGCCGGCATGGCCGTCATCATCGGCAACCTGCTTTACACCGCGGCCGCCGTGGTGCTGGTGCTCGCCGACGTGTTCCCGT TGACGTCGACGGGTGTGGTGTTGAACCTGGCGGCCGGCGTCTACACGCTGGTGTTCGCCGAGCTGCAATACTTTGGCTGG CGGCGCGCCAGGGCGTGA
Upstream 100 bases:
>100_bases GCTGCGCTCGCCCACGGTGGCGATGCGCGGCGCGGGCAGCGGCGCATGAGCGCTCGACGCCGCCGTTGCCGACACCGCGC GCAACCCCGCTGACCTGCGG
Downstream 100 bases:
>100_bases GGTTCGGGGCCCGCTCGGCGAACCCGGGCGGGCCCACCGCCGCCGTTGCTAGTCCTCGGGGATTTCGCGTTCGATCTCGT CGAGCCAGATGCGCGCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MAVFGSVARRSGSGGRAASVVTCQPSERKIMSATTIDRTTGRDGLLRLAMRADAAISGLVGLAGIPLVGWLAEVSGTTTA FEYGMSAFLIGYGVLVFGLAALPSVRRAGMAVIIGNLLYTAAAVVLVLADVFPLTSTGVVLNLAAGVYTLVFAELQYFGW RRARA
Sequences:
>Translated_165_residues MAVFGSVARRSGSGGRAASVVTCQPSERKIMSATTIDRTTGRDGLLRLAMRADAAISGLVGLAGIPLVGWLAEVSGTTTA FEYGMSAFLIGYGVLVFGLAALPSVRRAGMAVIIGNLLYTAAAVVLVLADVFPLTSTGVVLNLAAGVYTLVFAELQYFGW RRARA >Mature_164_residues AVFGSVARRSGSGGRAASVVTCQPSERKIMSATTIDRTTGRDGLLRLAMRADAAISGLVGLAGIPLVGWLAEVSGTTTAF EYGMSAFLIGYGVLVFGLAALPSVRRAGMAVIIGNLLYTAAAVVLVLADVFPLTSTGVVLNLAAGVYTLVFAELQYFGWR RARA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17103; Mature: 16972
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVFGSVARRSGSGGRAASVVTCQPSERKIMSATTIDRTTGRDGLLRLAMRADAAISGLV CCCCHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH GLAGIPLVGWLAEVSGTTTAFEYGMSAFLIGYGVLVFGLAALPSVRRAGMAVIIGNLLYT HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AAAVVLVLADVFPLTSTGVVLNLAAGVYTLVFAELQYFGWRRARA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AVFGSVARRSGSGGRAASVVTCQPSERKIMSATTIDRTTGRDGLLRLAMRADAAISGLV CCCHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH GLAGIPLVGWLAEVSGTTTAFEYGMSAFLIGYGVLVFGLAALPSVRRAGMAVIIGNLLYT HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AAAVVLVLADVFPLTSTGVVLNLAAGVYTLVFAELQYFGWRRARA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA