Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41407477

Identifier: 41407477

GI number: 41407477

Start: 1491136

End: 1492200

Strand: Direct

Name: 41407477

Synonym: MAP1379

Alternate gene names: NA

Gene position: 1491136-1492200 (Clockwise)

Preceding gene: 41407476

Following gene: 41407478

Centisome position: 30.87

GC content: 65.54

Gene sequence:

>1065_bases
ATGGCTATTGACCTCACTGGTGGCATCGACCCATCGCGCGAACTCGTGTTCGCTGAGCGTCCAGAGAACCCGGAGATGCG
AGACTCGGTGAGCTTCTGGGTCGTCGACGATCGCGGCGAGATCGGCCTGCCGAGGATCGGAATCGAAGCCGTCGCAGCCA
ATTGGGATGCCCACGACATCCAAGTCAACGTCGCTTACCCCGACGGTCGGGTGTACCGCCTGAGAGCCAACGGTCCGTCC
CTGCCCGCGGCGGGACCGGACGGCCGGCCGACGGTGTTGGGGGCAGGGGGATTGGCGTTCCGCTGCGTCGAACCATTTCA
CACATGGACGATGACCTACGAGGGCAAGGCCGTGCAGACGTCGTCGGCCGATCTGGTCAGCGGGCGCAAGGACGGCCCGT
TGGTCGACGTCGCTTTTGAGGTTGAGGCCGCGATGGCGGTGCCGCCCTGGGTTCAGGGCGCCTTACGCAACGATGCAGGC
CAACAACTGAAGTCATCCATCGAGGGCAACCTGATGGGCGGCCCCCGCTATGAACAACTCTTTCGGGCGGCCGGGTCGGT
GACGGTCGACGGCAGCGAGCGGCGGTTCAGCGGCAGTGGTCTGCGGATCCGCCGCCAAGGGGTGCGCAAGCTGGCCGGCT
TTTGGGGCCACGCCTGGCAGTCGGCGGTGTTCCCGAGCGGAAAAGCGTTCGGCTACATCGCCTATCCACCGCGACTCGAC
GGCCAGCCCACGTTCAACGAGGGCTACGTCTTTACCGGCGACGGGCCGCTGATCCCGGCGCGCGTGGTGCAGGCGCCGTG
GCTGACGCGGTTGCAGGCCCTGGGCGAAGACGTGTCACTGGTATTGGAAACCGGCCACGGCGTCGTCGCCGTCGAGGGAG
AGACGGTGTTCTCCACCCACGACATCCATCACGACGACGACTCCTACTCCGTACATGCCATGAAGAAGGAGATGCCCAGT
TTCCCCGCACTGCAGCAAGCCGGTGTGCGCTACCGCTGGGACGGCGAGGAGACCTACGGCATGCTCGAACGCTCCAACCC
GCTCGACAAGATTCATCGGGACTGA

Upstream 100 bases:

>100_bases
GTTCAGTTCGGGATCGACCTGGATTCGATACGGCCGCTGTTCGCCGACTACATCACGGCCGCCGCCGACTGGACCGCACA
CGCCGACATCTAGGAGAGCC

Downstream 100 bases:

>100_bases
ACTGCCTTGGCGGACAACAAAGTAGCTCTCATCACCGGAGCCGCGCGCGGGCAGGGACGTGCCCACGCGGTGCGGCTGAG
CGCCGGCGGCGCCGACATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MAIDLTGGIDPSRELVFAERPENPEMRDSVSFWVVDDRGEIGLPRIGIEAVAANWDAHDIQVNVAYPDGRVYRLRANGPS
LPAAGPDGRPTVLGAGGLAFRCVEPFHTWTMTYEGKAVQTSSADLVSGRKDGPLVDVAFEVEAAMAVPPWVQGALRNDAG
QQLKSSIEGNLMGGPRYEQLFRAAGSVTVDGSERRFSGSGLRIRRQGVRKLAGFWGHAWQSAVFPSGKAFGYIAYPPRLD
GQPTFNEGYVFTGDGPLIPARVVQAPWLTRLQALGEDVSLVLETGHGVVAVEGETVFSTHDIHHDDDSYSVHAMKKEMPS
FPALQQAGVRYRWDGEETYGMLERSNPLDKIHRD

Sequences:

>Translated_354_residues
MAIDLTGGIDPSRELVFAERPENPEMRDSVSFWVVDDRGEIGLPRIGIEAVAANWDAHDIQVNVAYPDGRVYRLRANGPS
LPAAGPDGRPTVLGAGGLAFRCVEPFHTWTMTYEGKAVQTSSADLVSGRKDGPLVDVAFEVEAAMAVPPWVQGALRNDAG
QQLKSSIEGNLMGGPRYEQLFRAAGSVTVDGSERRFSGSGLRIRRQGVRKLAGFWGHAWQSAVFPSGKAFGYIAYPPRLD
GQPTFNEGYVFTGDGPLIPARVVQAPWLTRLQALGEDVSLVLETGHGVVAVEGETVFSTHDIHHDDDSYSVHAMKKEMPS
FPALQQAGVRYRWDGEETYGMLERSNPLDKIHRD
>Mature_353_residues
AIDLTGGIDPSRELVFAERPENPEMRDSVSFWVVDDRGEIGLPRIGIEAVAANWDAHDIQVNVAYPDGRVYRLRANGPSL
PAAGPDGRPTVLGAGGLAFRCVEPFHTWTMTYEGKAVQTSSADLVSGRKDGPLVDVAFEVEAAMAVPPWVQGALRNDAGQ
QLKSSIEGNLMGGPRYEQLFRAAGSVTVDGSERRFSGSGLRIRRQGVRKLAGFWGHAWQSAVFPSGKAFGYIAYPPRLDG
QPTFNEGYVFTGDGPLIPARVVQAPWLTRLQALGEDVSLVLETGHGVVAVEGETVFSTHDIHHDDDSYSVHAMKKEMPSF
PALQQAGVRYRWDGEETYGMLERSNPLDKIHRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38644; Mature: 38513

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS00196 COPPER_BLUE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIDLTGGIDPSRELVFAERPENPEMRDSVSFWVVDDRGEIGLPRIGIEAVAANWDAHDI
CEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEEE
QVNVAYPDGRVYRLRANGPSLPAAGPDGRPTVLGAGGLAFRCVEPFHTWTMTYEGKAVQT
EEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEECCCEEEEEECCCEEEEEEECCCEEEC
SSADLVSGRKDGPLVDVAFEVEAAMAVPPWVQGALRNDAGQQLKSSIEGNLMGGPRYEQL
CCCHHHCCCCCCCEEEEEEEEEEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHH
FRAAGSVTVDGSERRFSGSGLRIRRQGVRKLAGFWGHAWQSAVFPSGKAFGYIAYPPRLD
HHHCCCEEECCCCCEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
GQPTFNEGYVFTGDGPLIPARVVQAPWLTRLQALGEDVSLVLETGHGVVAVEGETVFSTH
CCCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHCCCCEEEEEECCCCEEEEECCEEEEEC
DIHHDDDSYSVHAMKKEMPSFPALQQAGVRYRWDGEETYGMLERSNPLDKIHRD
CCCCCCCCEEEEEHHHHCCCCCCHHHCCCEEEECCCHHHHHHCCCCCHHHHCCC
>Mature Secondary Structure 
AIDLTGGIDPSRELVFAERPENPEMRDSVSFWVVDDRGEIGLPRIGIEAVAANWDAHDI
EEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEEE
QVNVAYPDGRVYRLRANGPSLPAAGPDGRPTVLGAGGLAFRCVEPFHTWTMTYEGKAVQT
EEEEECCCCEEEEEECCCCCCCCCCCCCCCEEEECCCEEEEEECCCEEEEEEECCCEEEC
SSADLVSGRKDGPLVDVAFEVEAAMAVPPWVQGALRNDAGQQLKSSIEGNLMGGPRYEQL
CCCHHHCCCCCCCEEEEEEEEEEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHH
FRAAGSVTVDGSERRFSGSGLRIRRQGVRKLAGFWGHAWQSAVFPSGKAFGYIAYPPRLD
HHHCCCEEECCCCCEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC
GQPTFNEGYVFTGDGPLIPARVVQAPWLTRLQALGEDVSLVLETGHGVVAVEGETVFSTH
CCCCCCCCEEEECCCCCCHHHHHCCHHHHHHHHCCCCEEEEEECCCCEEEEECCEEEEEC
DIHHDDDSYSVHAMKKEMPSFPALQQAGVRYRWDGEETYGMLERSNPLDKIHRD
CCCCCCCCEEEEEHHHHCCCCCCHHHCCCEEEECCCHHHHHHCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA