Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is argR
Identifier: 41407464
GI number: 41407464
Start: 1468874
End: 1469368
Strand: Direct
Name: argR
Synonym: MAP1366
Alternate gene names: 41407464
Gene position: 1468874-1469368 (Clockwise)
Preceding gene: 41407463
Following gene: 41407465
Centisome position: 30.41
GC content: 72.32
Gene sequence:
>495_bases ATGACCCGCTCGAAGAGCACCACCGAAACCACCCGGGCCGCCCGGCAGGCCCGCATCGTGGCGATCCTGTCGTCGGCGCA GGTGCGCAGCCAGAGCGAGCTGGCGGCGCTGCTGGCCGACGAGGGCATCGAGGTCACCCAGGCCACCCTGTCGCGCGACC TCGAGGAGCTGGGCGCGGTCAAACTGCGCGGCGCCGACGGCGGGGTCGGCGTCTACATGGTCCCCGAGGACGGCAGCCCG GTGCGCGGCGTATCGGGCGGCACCGCACGGCTTTCCCGGTTGCTGAGCGAGCTGCTGGTCTCGGCCGACGCCAGCGCGAA CCTCGCGGTGCTGCGCACTCCGCCGGGCGCCGCCGACTACCTGGCCAGCGCCATCGACCGGGCGGCGCTACCGTACGTCG TCGGCACCATCGCCGGCGACGACACCGTGTTCGTCGCCGCCCGCGATCCGATGACGGGCGCGGAGTTGGCCGACACATTG GAAAAACTCACCTAA
Upstream 100 bases:
>100_bases ACGAGGTGATGGACGGGCCGTCCAGCGTCGTCTGGGACGAGGCCGAAAACCGGTTGCACGCGCAAAAGGCGCTGCTCACC TGGCTTTTGGAGCGGCAGTC
Downstream 100 bases:
>100_bases AGCGGTTCAACTTAAGGAGATTGGTTCATGTCAGAACGCGTCATCCTGGCGTATTCCGGCGGTCTGGACACCTCGGTGGC CATCAGCTGGATCGGCAAGG
Product: arginine repressor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTRSKSTTETTRAARQARIVAILSSAQVRSQSELAALLADEGIEVTQATLSRDLEELGAVKLRGADGGVGVYMVPEDGSP VRGVSGGTARLSRLLSELLVSADASANLAVLRTPPGAADYLASAIDRAALPYVVGTIAGDDTVFVAARDPMTGAELADTL EKLT
Sequences:
>Translated_164_residues MTRSKSTTETTRAARQARIVAILSSAQVRSQSELAALLADEGIEVTQATLSRDLEELGAVKLRGADGGVGVYMVPEDGSP VRGVSGGTARLSRLLSELLVSADASANLAVLRTPPGAADYLASAIDRAALPYVVGTIAGDDTVFVAARDPMTGAELADTL EKLT >Mature_163_residues TRSKSTTETTRAARQARIVAILSSAQVRSQSELAALLADEGIEVTQATLSRDLEELGAVKLRGADGGVGVYMVPEDGSPV RGVSGGTARLSRLLSELLVSADASANLAVLRTPPGAADYLASAIDRAALPYVVGTIAGDDTVFVAARDPMTGAELADTLE KLT
Specific function: Regulates arginine biosynthesis genes [H]
COG id: COG1438
COG function: function code K; Arginine repressor
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArgR family [H]
Homologues:
Organism=Escherichia coli, GI1789633, Length=156, Percent_Identity=32.6923076923077, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001669 - InterPro: IPR020899 - InterPro: IPR020900 - InterPro: IPR011991 - ProDom: PD007402 [H]
Pfam domain/function: PF01316 Arg_repressor; PF02863 Arg_repressor_C [H]
EC number: NA
Molecular weight: Translated: 16898; Mature: 16767
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSKSTTETTRAARQARIVAILSSAQVRSQSELAALLADEGIEVTQATLSRDLEELGAV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCE KLRGADGGVGVYMVPEDGSPVRGVSGGTARLSRLLSELLVSADASANLAVLRTPPGAADY EEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH LASAIDRAALPYVVGTIAGDDTVFVAARDPMTGAELADTLEKLT HHHHHHHHHHHHHEEEECCCCEEEEEECCCCCHHHHHHHHHHCC >Mature Secondary Structure TRSKSTTETTRAARQARIVAILSSAQVRSQSELAALLADEGIEVTQATLSRDLEELGAV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCE KLRGADGGVGVYMVPEDGSPVRGVSGGTARLSRLLSELLVSADASANLAVLRTPPGAADY EEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHH LASAIDRAALPYVVGTIAGDDTVFVAARDPMTGAELADTLEKLT HHHHHHHHHHHHHEEEECCCCEEEEEECCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA