| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407402
Identifier: 41407402
GI number: 41407402
Start: 1392059
End: 1392490
Strand: Direct
Name: 41407402
Synonym: MAP1304
Alternate gene names: NA
Gene position: 1392059-1392490 (Clockwise)
Preceding gene: 41407401
Following gene: 41407403
Centisome position: 28.82
GC content: 74.31
Gene sequence:
>432_bases ATGACCGAGGCCCGCGCGCGGAGGCTGGACGGCCGCTGGTTGATCCGGATCGCCCAGCTGCTGCTGGTGATCGCGGCCGT GGGCTTGTGGGTGGCCGCGCGCCTGCCGTGGGTGGTGATCCGCTCGTTCGACGGGCTGGGGCCGCCCAAGGCGGTGACCC TGTCCGGCGGGACGTGGTCGACGGCGTTGCTGCCGCTGGCGTTGCTGCTGCTGGCCGCCGCGGTAGCCGCGATCGCGGTG CGCGGGTGGCTGCTGCGCGCGCTGGCCGGCCTGCTGGCGGTGGCCAGCCTGGCGGTCGGCTACCTGGGCGTCAGCCTTTG GGTGCTGTCCGACGTCGCGGTGCGCGGCACCGAGCTGGCGCACCTGTCGGTGATCTCGCTGGTCGGCAGCGAGCGGCGGT ACCTGGGCGCCGGGAAATGTCGGAGCGGATGA
Upstream 100 bases:
>100_bases CCAACGGCCCCTACGAATACACCGAGGCCACCAACAAGGCGCGCGCGGTGCTCGGCGCGATCGCGGCCGCCGAGACGCTG ACCGAACCGGGCGCGCGGCG
Downstream 100 bases:
>100_bases TCTGGGACGCCCTTGACGAGGGGCGCGACCCGACCGATCGACCCAGCGGGTCCGACACCGAGGGTCGGTGACGGGACGCG AGCCGCGGGCCGCTACCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MTEARARRLDGRWLIRIAQLLLVIAAVGLWVAARLPWVVIRSFDGLGPPKAVTLSGGTWSTALLPLALLLLAAAVAAIAV RGWLLRALAGLLAVASLAVGYLGVSLWVLSDVAVRGTELAHLSVISLVGSERRYLGAGKCRSG
Sequences:
>Translated_143_residues MTEARARRLDGRWLIRIAQLLLVIAAVGLWVAARLPWVVIRSFDGLGPPKAVTLSGGTWSTALLPLALLLLAAAVAAIAV RGWLLRALAGLLAVASLAVGYLGVSLWVLSDVAVRGTELAHLSVISLVGSERRYLGAGKCRSG >Mature_142_residues TEARARRLDGRWLIRIAQLLLVIAAVGLWVAARLPWVVIRSFDGLGPPKAVTLSGGTWSTALLPLALLLLAAAVAAIAVR GWLLRALAGLLAVASLAVGYLGVSLWVLSDVAVRGTELAHLSVISLVGSERRYLGAGKCRSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15001; Mature: 14870
Theoretical pI: Translated: 12.00; Mature: 12.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEARARRLDGRWLIRIAQLLLVIAAVGLWVAARLPWVVIRSFDGLGPPKAVTLSGGTWS CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHH TALLPLALLLLAAAVAAIAVRGWLLRALAGLLAVASLAVGYLGVSLWVLSDVAVRGTELA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH HLSVISLVGSERRYLGAGKCRSG HHHHHHHHCCCHHHCCCCCCCCC >Mature Secondary Structure TEARARRLDGRWLIRIAQLLLVIAAVGLWVAARLPWVVIRSFDGLGPPKAVTLSGGTWS CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHH TALLPLALLLLAAAVAAIAVRGWLLRALAGLLAVASLAVGYLGVSLWVLSDVAVRGTELA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH HLSVISLVGSERRYLGAGKCRSG HHHHHHHHCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA