| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is hisB
Identifier: 41407393
GI number: 41407393
Start: 1384767
End: 1385390
Strand: Direct
Name: hisB
Synonym: MAP1295
Alternate gene names: 41407393
Gene position: 1384767-1385390 (Clockwise)
Preceding gene: 41407392
Following gene: 41407394
Centisome position: 28.67
GC content: 69.23
Gene sequence:
>624_bases ATGACCGCCGTGCAAGCTGCCCGTCGCGCGCGAATCGAGCGCCGCACCAAGGAATCCGACATCGTCATCGAACTCGACTT GGACGGCACCGGCCGGGTCGACGTGGAGACCGGTGTGCCGTTCTACGACCACATGCTCACCGCACTGGGCAGCCACGCCA GCTTCGACCTGACCGTGCGCACCACGGGCGACGTCGAGATCGAGGCACACCACACCATCGAGGACACCGCCATCGCGCTG GGCGCCGCGCTGGGCCAGGCGCTCGGCGACAAGCGGGGCATCCGCCGGTTCGGTGACGCCTTCATCCCGATGGACGAGAC GCTGGCCCACGCCGCCGTCGACGTGTCCGGCCGGCCCTACTGCGTGCACAGCGGCGAGCCGGATCACCTGCAGCACAGCA CGATCGCCGGCAGCTCGGTGCCCTACCACACCGTCATCAACCGGCACGTGTTCGAGTCGCTGGCGATGAACGCCCGCATC GCGCTGCACGTGCGGGTGCTCTACGGGCGCGACCCGCACCACATCACCGAAGCGCAGTACAAGGCGGTGGCCCGTGCGCT GCGTCAGGCCGTCGAGCCCGACCCGCGGGTGTCGGACGTGCCGTCCACCAAAGGTGTTCTGTGA
Upstream 100 bases:
>100_bases CCCAACTCGCCGCCACCGAGCTGGCCCCCGTCAACGTAGGAGCGATCGCAAACGCAGCCGAGCCGCGCGCAGCGGGTCGC GACCGTGTGTTAGGAGCCCC
Downstream 100 bases:
>100_bases CAAGTAAATCGGTTGTTGTCCTCGACTACGGCTCGGGCAACCTGCGGTCGGCGCAGCGCGCGCTGGAGCGGGTCGGCGCC TCGGTGCAGGTGACCGCCGA
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD [H]
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MTAVQAARRARIERRTKESDIVIELDLDGTGRVDVETGVPFYDHMLTALGSHASFDLTVRTTGDVEIEAHHTIEDTAIAL GAALGQALGDKRGIRRFGDAFIPMDETLAHAAVDVSGRPYCVHSGEPDHLQHSTIAGSSVPYHTVINRHVFESLAMNARI ALHVRVLYGRDPHHITEAQYKAVARALRQAVEPDPRVSDVPSTKGVL
Sequences:
>Translated_207_residues MTAVQAARRARIERRTKESDIVIELDLDGTGRVDVETGVPFYDHMLTALGSHASFDLTVRTTGDVEIEAHHTIEDTAIAL GAALGQALGDKRGIRRFGDAFIPMDETLAHAAVDVSGRPYCVHSGEPDHLQHSTIAGSSVPYHTVINRHVFESLAMNARI ALHVRVLYGRDPHHITEAQYKAVARALRQAVEPDPRVSDVPSTKGVL >Mature_206_residues TAVQAARRARIERRTKESDIVIELDLDGTGRVDVETGVPFYDHMLTALGSHASFDLTVRTTGDVEIEAHHTIEDTAIALG AALGQALGDKRGIRRFGDAFIPMDETLAHAAVDVSGRPYCVHSGEPDHLQHSTIAGSSVPYHTVINRHVFESLAMNARIA LHVRVLYGRDPHHITEAQYKAVARALRQAVEPDPRVSDVPSTKGVL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=210, Percent_Identity=40.4761904761905, Blast_Score=148, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6324776, Length=224, Percent_Identity=37.9464285714286, Blast_Score=148, Evalue=7e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD [H]
EC number: =4.2.1.19 [H]
Molecular weight: Translated: 22584; Mature: 22453
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVQAARRARIERRTKESDIVIELDLDGTGRVDVETGVPFYDHMLTALGSHASFDLTVR CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHHCCCCEEEEEEE TTGDVEIEAHHTIEDTAIALGAALGQALGDKRGIRRFGDAFIPMDETLAHAAVDVSGRPY ECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCE CVHSGEPDHLQHSTIAGSSVPYHTVINRHVFESLAMNARIALHVRVLYGRDPHHITEAQY EEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCHHHHHHH KAVARALRQAVEPDPRVSDVPSTKGVL HHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TAVQAARRARIERRTKESDIVIELDLDGTGRVDVETGVPFYDHMLTALGSHASFDLTVR CHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHHCCCCEEEEEEE TTGDVEIEAHHTIEDTAIALGAALGQALGDKRGIRRFGDAFIPMDETLAHAAVDVSGRPY ECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCE CVHSGEPDHLQHSTIAGSSVPYHTVINRHVFESLAMNARIALHVRVLYGRDPHHITEAQY EEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCHHHHHHH KAVARALRQAVEPDPRVSDVPSTKGVL HHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]