| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407151
Identifier: 41407151
GI number: 41407151
Start: 1104142
End: 1105401
Strand: Direct
Name: 41407151
Synonym: MAP1053
Alternate gene names: NA
Gene position: 1104142-1105401 (Clockwise)
Preceding gene: 41407150
Following gene: 41407152
Centisome position: 22.86
GC content: 73.17
Gene sequence:
>1260_bases GTGGACGATGCTATGGTCGAACACATGTTCGAGTATGTGGTGGCGTCGCGGTCCACGCCGGAGGCGGTGGCGCTGCTGGA TCGGGCGCGGGAGGCGGCCCGGGCCGAGGCGCGGGCGGCCGCGGCCCGGCTGGTGGCGATCGCCGAGTTGTTGGTGTTGC GTTGCCGGGAGACGGGGGAGCGGGCGGATTGGGCCGCCGATGCCTGGGAGGCGGTGGCCGCGCAGGTGGGGGCGGCGCTG GGCTGCAGCGTGGCGATGGGGCACAGCTATCTGCGTTATGCGATGGCGATGCGGGAACGGTTGCCGCAGGTCGGGGCGGT GTTCGCGGCCGGGGGCATCGATTACCGGGCGTTTCAGACCCTGGTGTTTCGCACCGATTTGATCACTGATGCGCAGGTGT TGGCCCGGGTGGACGCCACGCTGGCCGTGTTGGTGTCGCGGCGGCCGTCGCTGACCCGCGGTGGGCTGGCCGCCGCGGTG GATCGGGTAGTGGCGGCCGTGGATGCCGATGCGGTGCGCCGGGCACGCGACGCGGTGACCGGCCGGTATCTGGATGTGCG GGCCAACGAGTCGGGGATGGCCTGGGTGGAAGGCAACGTCCTCGGGCCCGACGGGCATGCCCTGGATCGCCGGCTCGACG AGCTGGCCAGTGGAGTGTGTGCGGGGGATCCGCGCAGCCGCGCCCAGCGGCGCGCCGACGCGTTGGGGGCGCTGGCCGCC GGTGCCGGGCGGCTGGCGTGTGGCTGCGGATCACCGGACTGCCCGAGCGCAGCCGCGCCGGCGCCGCGCAGCACTGTGGT GATCCACGTGGTCGCCGAACAGGCCACCGTCGCCGGCCGAGGGGCCACGCCCGCTGTGGTGGCCGGGCTCGACGGGCTGA TCCCGGCGCAGGTCATCGCCGAGCTGGCCGCCTCGGCGCGGCTGGTGCCGGTGGCGGTGCCCGAGGGCGGGCCCGAACCC GGCTACACCCCGTCGGCCCGGCTGGCCGACTTCATCCGCTGCCGGGACCTGACCTGTCGGGCGCCCGGGTGTGATCGCCC CGCCGTCGACTGCGATGTGGACCATACGATCCCGTACGCCCAGGGCGGGCCCACCCACCCGTCGAACCTCAAATGCCTGT GCCGTGGCCATCATTTGCTGAAAACGTTCTGGGGCTGGCGCGACCGGCAACTGCCCGACGGCACGGTGATCTGGACCCTG CCCGACGGCGACACCTACGTCACCACCCCGGGCAGCGCGCTGCTGTTCCCCACCCTATGA
Upstream 100 bases:
>100_bases GGGTTTTCTCCTCGGCCGGAATCCGCGACCGACGCATCTCCTTACCCATTCAGCTGCCGCAGTTATCCACACGTCGCGAA CTGCCAAAAAGCATGCGTCG
Downstream 100 bases:
>100_bases ACACCCACCGGGGCCGTGTCGCCGGCCAAGCCCGACACCGAGCACCGCTGCGGCGAGCGCACCGCCATGATGCCGCTGCG CCGCCATACCCGCGCCCACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MDDAMVEHMFEYVVASRSTPEAVALLDRAREAARAEARAAAARLVAIAELLVLRCRETGERADWAADAWEAVAAQVGAAL GCSVAMGHSYLRYAMAMRERLPQVGAVFAAGGIDYRAFQTLVFRTDLITDAQVLARVDATLAVLVSRRPSLTRGGLAAAV DRVVAAVDADAVRRARDAVTGRYLDVRANESGMAWVEGNVLGPDGHALDRRLDELASGVCAGDPRSRAQRRADALGALAA GAGRLACGCGSPDCPSAAAPAPRSTVVIHVVAEQATVAGRGATPAVVAGLDGLIPAQVIAELAASARLVPVAVPEGGPEP GYTPSARLADFIRCRDLTCRAPGCDRPAVDCDVDHTIPYAQGGPTHPSNLKCLCRGHHLLKTFWGWRDRQLPDGTVIWTL PDGDTYVTTPGSALLFPTL
Sequences:
>Translated_419_residues MDDAMVEHMFEYVVASRSTPEAVALLDRAREAARAEARAAAARLVAIAELLVLRCRETGERADWAADAWEAVAAQVGAAL GCSVAMGHSYLRYAMAMRERLPQVGAVFAAGGIDYRAFQTLVFRTDLITDAQVLARVDATLAVLVSRRPSLTRGGLAAAV DRVVAAVDADAVRRARDAVTGRYLDVRANESGMAWVEGNVLGPDGHALDRRLDELASGVCAGDPRSRAQRRADALGALAA GAGRLACGCGSPDCPSAAAPAPRSTVVIHVVAEQATVAGRGATPAVVAGLDGLIPAQVIAELAASARLVPVAVPEGGPEP GYTPSARLADFIRCRDLTCRAPGCDRPAVDCDVDHTIPYAQGGPTHPSNLKCLCRGHHLLKTFWGWRDRQLPDGTVIWTL PDGDTYVTTPGSALLFPTL >Mature_419_residues MDDAMVEHMFEYVVASRSTPEAVALLDRAREAARAEARAAAARLVAIAELLVLRCRETGERADWAADAWEAVAAQVGAAL GCSVAMGHSYLRYAMAMRERLPQVGAVFAAGGIDYRAFQTLVFRTDLITDAQVLARVDATLAVLVSRRPSLTRGGLAAAV DRVVAAVDADAVRRARDAVTGRYLDVRANESGMAWVEGNVLGPDGHALDRRLDELASGVCAGDPRSRAQRRADALGALAA GAGRLACGCGSPDCPSAAAPAPRSTVVIHVVAEQATVAGRGATPAVVAGLDGLIPAQVIAELAASARLVPVAVPEGGPEP GYTPSARLADFIRCRDLTCRAPGCDRPAVDCDVDHTIPYAQGGPTHPSNLKCLCRGHHLLKTFWGWRDRQLPDGTVIWTL PDGDTYVTTPGSALLFPTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv3776 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003870 - InterPro: IPR003615 [H]
Pfam domain/function: PF02720 DUF222 [H]
EC number: NA
Molecular weight: Translated: 44009; Mature: 44009
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDAMVEHMFEYVVASRSTPEAVALLDRAREAARAEARAAAARLVAIAELLVLRCRETGE CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RADWAADAWEAVAAQVGAALGCSVAMGHSYLRYAMAMRERLPQVGAVFAAGGIDYRAFQT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHH LVFRTDLITDAQVLARVDATLAVLVSRRPSLTRGGLAAAVDRVVAAVDADAVRRARDAVT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHC GRYLDVRANESGMAWVEGNVLGPDGHALDRRLDELASGVCAGDPRSRAQRRADALGALAA CCEEEEEECCCCCEEEECCEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC GAGRLACGCGSPDCPSAAAPAPRSTVVIHVVAEQATVAGRGATPAVVAGLDGLIPAQVIA CCCCEEECCCCCCCCCCCCCCCCCEEEEEEEECCCEECCCCCCCHHHHCCCCCCHHHHHH ELAASARLVPVAVPEGGPEPGYTPSARLADFIRCRDLTCRAPGCDRPAVDCDVDHTIPYA HHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCC QGGPTHPSNLKCLCRGHHLLKTFWGWRDRQLPDGTVIWTLPDGDTYVTTPGSALLFPTL CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCCCEEECCCC >Mature Secondary Structure MDDAMVEHMFEYVVASRSTPEAVALLDRAREAARAEARAAAARLVAIAELLVLRCRETGE CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RADWAADAWEAVAAQVGAALGCSVAMGHSYLRYAMAMRERLPQVGAVFAAGGIDYRAFQT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHH LVFRTDLITDAQVLARVDATLAVLVSRRPSLTRGGLAAAVDRVVAAVDADAVRRARDAVT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHC GRYLDVRANESGMAWVEGNVLGPDGHALDRRLDELASGVCAGDPRSRAQRRADALGALAA CCEEEEEECCCCCEEEECCEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC GAGRLACGCGSPDCPSAAAPAPRSTVVIHVVAEQATVAGRGATPAVVAGLDGLIPAQVIA CCCCEEECCCCCCCCCCCCCCCCCEEEEEEEECCCEECCCCCCCHHHHCCCCCCHHHHHH ELAASARLVPVAVPEGGPEPGYTPSARLADFIRCRDLTCRAPGCDRPAVDCDVDHTIPYA HHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCC QGGPTHPSNLKCLCRGHHLLKTFWGWRDRQLPDGTVIWTLPDGDTYVTTPGSALLFPTL CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]