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The map label for this gene is 41407152

Identifier: 41407152

GI number: 41407152

Start: 1105672

End: 1106700

Strand: Direct

Name: 41407152

Synonym: MAP1054

Alternate gene names: NA

Gene position: 1105672-1106700 (Clockwise)

Preceding gene: 41407151

Following gene: 41407154

Centisome position: 22.89

GC content: 71.62

Gene sequence:

>1029_bases
ATGCGGTGGGCGAGTCAGGCCGTCGCGGTCAACGGGAAACCCGTCGAGGACGGGGCGCTGCCGGGGCTGCAACGCCTCGG
TCTGGTGCGCAGCGTGCGCGCGCCCCAGTTCGAGGGCATCACCTTCCACGAGGTGCTGTGCAAGTCCGCGCTGAACAAGG
TGCCGAACGCCTCGGCGCTGCCGTTCCGCTACACCGTCAACGGCTACCGAGGCTGCTCGCACGCCTGCCGGTACTGCTTC
GCCCGGCCCAGCCACGAATACCTGGAGTTGAACTGCGGCAATGACTTTGACACCCAGGTCGTCGTCAAGACCAACGTCGC
ACAGGTGCTGCGCCGGGAACTGCGGCGGCCGTCGTGGCGGCGCGAGACCGTCGCGCTGGGCACCAACACCGATCCCTACC
AGCGGGCCGAGGGCCGGTATGCGCTGATGCCCGGCATCATCGGCGCGCTGGCCGAATCGGGCACCCCGCTGTCGATCCTG
ACCAAGGGCACGCTGCTGCGCCGGGACCTGCCGCTGATCGCGAACGCCGCCGCGCAGGTTCCGGTTTCGGTGGCGGTGTC
GCTGGCGGTGGGCGACGCGGACCTGCACCGCGACGTCGAGCCGGGCACCCCGACGCCGCAGGCGCGCCTGGGTCTGATCA
GCGCGATCCGCGCCGCCGGGCTGGACTGCCACGTGATGGTCGCGCCGGTACTGCCCTACCTCACCGATTCCGTCGAGCAC
CTCGACGACCTGCTCGGCCAGATCGCGGCCGCCGGCGCGGGCAGCGTCACGGTCTTCGGCCTGCACCTGCGCGGCTCGAC
GCGGGGCTGGTTCATGGAATGGCTGGCCCGCTCGCATCCCGAGCTGGTCGGCCGCTACCGGGAGCTGTACCGTCGCGGCG
CCTACCTGCCGCCGAGCTATCGCGACATGCTGCGGCACCGCGCCGCCCCGCTGATCGCCAAGTACCGGCTGGGCGGTGAT
CACCGCCCGTTCTCCCGAGCGGTTGCGGCCGCGCCGGCGCCCGAACCCGCTCAGCCGACGCTGTTCTGA

Upstream 100 bases:

>100_bases
ACCCGGACCCGCACCACCACCCGACCCCGACGACGAGCCGCCACCCTTCTGACCGCAGAGGCCCTTGACTCGATCTCGAA
CTGGTGTTCGAATTACTGGC

Downstream 100 bases:

>100_bases
CAAGCCGGAAAACCCGAAAAACTCCGAGAACTCAGCGGGCCCCGTCGCCGCGCGGCTTGGTCAGCGTGAATCGGTCGATC
ACCGACATCTCGCCGAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MRWASQAVAVNGKPVEDGALPGLQRLGLVRSVRAPQFEGITFHEVLCKSALNKVPNASALPFRYTVNGYRGCSHACRYCF
ARPSHEYLELNCGNDFDTQVVVKTNVAQVLRRELRRPSWRRETVALGTNTDPYQRAEGRYALMPGIIGALAESGTPLSIL
TKGTLLRRDLPLIANAAAQVPVSVAVSLAVGDADLHRDVEPGTPTPQARLGLISAIRAAGLDCHVMVAPVLPYLTDSVEH
LDDLLGQIAAAGAGSVTVFGLHLRGSTRGWFMEWLARSHPELVGRYRELYRRGAYLPPSYRDMLRHRAAPLIAKYRLGGD
HRPFSRAVAAAPAPEPAQPTLF

Sequences:

>Translated_342_residues
MRWASQAVAVNGKPVEDGALPGLQRLGLVRSVRAPQFEGITFHEVLCKSALNKVPNASALPFRYTVNGYRGCSHACRYCF
ARPSHEYLELNCGNDFDTQVVVKTNVAQVLRRELRRPSWRRETVALGTNTDPYQRAEGRYALMPGIIGALAESGTPLSIL
TKGTLLRRDLPLIANAAAQVPVSVAVSLAVGDADLHRDVEPGTPTPQARLGLISAIRAAGLDCHVMVAPVLPYLTDSVEH
LDDLLGQIAAAGAGSVTVFGLHLRGSTRGWFMEWLARSHPELVGRYRELYRRGAYLPPSYRDMLRHRAAPLIAKYRLGGD
HRPFSRAVAAAPAPEPAQPTLF
>Mature_342_residues
MRWASQAVAVNGKPVEDGALPGLQRLGLVRSVRAPQFEGITFHEVLCKSALNKVPNASALPFRYTVNGYRGCSHACRYCF
ARPSHEYLELNCGNDFDTQVVVKTNVAQVLRRELRRPSWRRETVALGTNTDPYQRAEGRYALMPGIIGALAESGTPLSIL
TKGTLLRRDLPLIANAAAQVPVSVAVSLAVGDADLHRDVEPGTPTPQARLGLISAIRAAGLDCHVMVAPVLPYLTDSVEH
LDDLLGQIAAAGAGSVTVFGLHLRGSTRGWFMEWLARSHPELVGRYRELYRRGAYLPPSYRDMLRHRAAPLIAKYRLGGD
HRPFSRAVAAAPAPEPAQPTLF

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 37312; Mature: 37312

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWASQAVAVNGKPVEDGALPGLQRLGLVRSVRAPQFEGITFHEVLCKSALNKVPNASAL
CCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PFRYTVNGYRGCSHACRYCFARPSHEYLELNCGNDFDTQVVVKTNVAQVLRRELRRPSWR
CEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCCC
RETVALGTNTDPYQRAEGRYALMPGIIGALAESGTPLSILTKGTLLRRDLPLIANAAAQV
CCEEEECCCCCHHHHCCCCEEEHHHHHHHHHCCCCCEEEEECCHHHHCCCCHHHHHHHHC
PVSVAVSLAVGDADLHRDVEPGTPTPQARLGLISAIRAAGLDCHVMVAPVLPYLTDSVEH
CEEEEEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHH
LDDLLGQIAAAGAGSVTVFGLHLRGSTRGWFMEWLARSHPELVGRYRELYRRGAYLPPSY
HHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHH
RDMLRHRAAPLIAKYRLGGDHRPFSRAVAAAPAPEPAQPTLF
HHHHHHHHCCHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRWASQAVAVNGKPVEDGALPGLQRLGLVRSVRAPQFEGITFHEVLCKSALNKVPNASAL
CCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PFRYTVNGYRGCSHACRYCFARPSHEYLELNCGNDFDTQVVVKTNVAQVLRRELRRPSWR
CEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCCC
RETVALGTNTDPYQRAEGRYALMPGIIGALAESGTPLSILTKGTLLRRDLPLIANAAAQV
CCEEEECCCCCHHHHCCCCEEEHHHHHHHHHCCCCCEEEEECCHHHHCCCCHHHHHHHHC
PVSVAVSLAVGDADLHRDVEPGTPTPQARLGLISAIRAAGLDCHVMVAPVLPYLTDSVEH
CEEEEEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHH
LDDLLGQIAAAGAGSVTVFGLHLRGSTRGWFMEWLARSHPELVGRYRELYRRGAYLPPSY
HHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHH
RDMLRHRAAPLIAKYRLGGDHRPFSRAVAAAPAPEPAQPTLF
HHHHHHHHCCHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]