Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41407049

Identifier: 41407049

GI number: 41407049

Start: 983019

End: 984644

Strand: Direct

Name: 41407049

Synonym: MAP0951

Alternate gene names: NA

Gene position: 983019-984644 (Clockwise)

Preceding gene: 41407047

Following gene: 41407050

Centisome position: 20.35

GC content: 67.47

Gene sequence:

>1626_bases
GTGTGCTTGGCGCTGCTGCTCGACGGGTGCGGTCAGCGCGGCGATCTCGGTCCGCTTTCGCTGATCGCCAGCCCGGCCAT
CCCGTTGTCGGTGCAGGACGTTCCGAATCCGCTGCGCGGCCAGTACGAAGATCTGTTGCAACCGCTTTTCCCGCAAGGCA
ATCCGGCGCAGCGTCGCTACCCGGCCTGGCCGGCGTCGCAGGACGCCAGTTTGCGTGTTCCGTGGCGGCAGCTGCAGCCC
ACCGATCCGAGCAGCCTGCCGCCCGACGCTCCCGACGACCGCAAATTCGATTTCAGCGTGATCGACGACGCGCTGGCGAA
GCTGGCCAGCCGCAACATGCGGTTGACCCTGCGGGTGGTCGCCTACAACTCCTGTTGCGACACCGTCTATCCGAACAACA
CCAACATCGCGATGCCCGACTGGATGCGCCCGGCGGCCACCAATTACACCGGTCCGCAACGGTATTGGTGGTCACCCGGG
GTGACGCAGGTCGTGCCGAACTGGAACGACCAGAACTACCTCAACGCCTTCGGGCAGCTGTTGGCCGCGTTGGGGCGCCG
GTACGACGGCGACGAGCGGCTCAGCGTGTTCGAGTTCTCCGGCTACGGCGATTTCAGCGAGAACCACATCTCGTATCTGC
GTGACTCGTTGGGCGCGCCGGGTCCGGCGCCCGACGAAAGTGTGGCGAAACTGGGGTATTTCAGCCAGTTCCGGGACCAG
AACATCACCGCCGGTTCCATTCGCCAGCTGGTCGAGGCGACCGTAAAGGCTTTTCCCCACACGCAATTGGTGACGACGGC
GCTCAACCCGGAGATCGTGCGCCAGTTGATCGCCGACGACGTCACCAAGCGGCTGTCCGCCCCGGTCGGCATCCGCGCCG
ACTGCCTGGGCGTGCAGGACCCGCTGCCGGCCTGGGCGGAAAGGGACGGCTCGCACTACGTGCAGACCAAAGACCCGCTG
GTCGGCGCGCTGCGCGACCGGATGGCCGCGGCACCGGTGATCACCGAATGGTGCCAGCTGCCGGCCGGGACCGATCCGCG
GTCCTACTACGAAAAGGGCCTGCGCGACGTCATGAAGTACCACGTGTCGATGACGTCGAGCTTCAACTTCCCGGCGGTGG
ATGCGAGCACCCCGATGGACCCGGCGCTGTACCTGCTGTGGGCGCAGGCCAACGTCGTGGCCGGCTACCGGTATTCGGCC
GAGGCGCGGCAGGGATCGCAATCGTTGGCCGACGGCAAGGCGACATTGGACGTCACGTGGACCAATTACGGTTCCGCGGC
CGCCACCGAGAACTGGGTCCCCGGCTACCGGCTGGTCGACTTCTCGGGGGCGGTGGTGCGCACGCTGCCCGCGCGGGTGA
CGCTGAAAACGCTGGTGCCGGGACCGGACGGCGCGGGCAAGGAACCCGCCCCGGTGTCGTCTGTCGAGACCGTTCACATC
GACCTGGCGGGCGTGTCGCCGGGGCACTACACGTTGTGCGCGGCGGTCGGTTGGCAACAGCACAAGCCGGGCGCCGAGCA
CGTGGTGAACTACCCGCCCATGCGGCTGGCGCGCGACGGACGCGACGGCAACGGATGCTATCCGCTCGCCACGCTGAACC
TGGCGCGCGAAGCCTCGACCGCCTGA

Upstream 100 bases:

>100_bases
CGATGCCGTTCCGCAACCACGGCGAGCCGTCGCCGCCGGGCGCGGATCAGCCCGCGCCACGGCGGCGGCGAGAACGAGGA
AGTTCGTTCTGGTCGTCGGG

Downstream 100 bases:

>100_bases
TCCCGGCGGCGCACCACCTGGCCGAACAAGCCGCCGGAGCCGTGGTGAACCCGCGCAGCGGGACTTCCGATTCCGCCAAA
CCCCGCCTGACGATGCTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MCLALLLDGCGQRGDLGPLSLIASPAIPLSVQDVPNPLRGQYEDLLQPLFPQGNPAQRRYPAWPASQDASLRVPWRQLQP
TDPSSLPPDAPDDRKFDFSVIDDALAKLASRNMRLTLRVVAYNSCCDTVYPNNTNIAMPDWMRPAATNYTGPQRYWWSPG
VTQVVPNWNDQNYLNAFGQLLAALGRRYDGDERLSVFEFSGYGDFSENHISYLRDSLGAPGPAPDESVAKLGYFSQFRDQ
NITAGSIRQLVEATVKAFPHTQLVTTALNPEIVRQLIADDVTKRLSAPVGIRADCLGVQDPLPAWAERDGSHYVQTKDPL
VGALRDRMAAAPVITEWCQLPAGTDPRSYYEKGLRDVMKYHVSMTSSFNFPAVDASTPMDPALYLLWAQANVVAGYRYSA
EARQGSQSLADGKATLDVTWTNYGSAAATENWVPGYRLVDFSGAVVRTLPARVTLKTLVPGPDGAGKEPAPVSSVETVHI
DLAGVSPGHYTLCAAVGWQQHKPGAEHVVNYPPMRLARDGRDGNGCYPLATLNLAREASTA

Sequences:

>Translated_541_residues
MCLALLLDGCGQRGDLGPLSLIASPAIPLSVQDVPNPLRGQYEDLLQPLFPQGNPAQRRYPAWPASQDASLRVPWRQLQP
TDPSSLPPDAPDDRKFDFSVIDDALAKLASRNMRLTLRVVAYNSCCDTVYPNNTNIAMPDWMRPAATNYTGPQRYWWSPG
VTQVVPNWNDQNYLNAFGQLLAALGRRYDGDERLSVFEFSGYGDFSENHISYLRDSLGAPGPAPDESVAKLGYFSQFRDQ
NITAGSIRQLVEATVKAFPHTQLVTTALNPEIVRQLIADDVTKRLSAPVGIRADCLGVQDPLPAWAERDGSHYVQTKDPL
VGALRDRMAAAPVITEWCQLPAGTDPRSYYEKGLRDVMKYHVSMTSSFNFPAVDASTPMDPALYLLWAQANVVAGYRYSA
EARQGSQSLADGKATLDVTWTNYGSAAATENWVPGYRLVDFSGAVVRTLPARVTLKTLVPGPDGAGKEPAPVSSVETVHI
DLAGVSPGHYTLCAAVGWQQHKPGAEHVVNYPPMRLARDGRDGNGCYPLATLNLAREASTA
>Mature_541_residues
MCLALLLDGCGQRGDLGPLSLIASPAIPLSVQDVPNPLRGQYEDLLQPLFPQGNPAQRRYPAWPASQDASLRVPWRQLQP
TDPSSLPPDAPDDRKFDFSVIDDALAKLASRNMRLTLRVVAYNSCCDTVYPNNTNIAMPDWMRPAATNYTGPQRYWWSPG
VTQVVPNWNDQNYLNAFGQLLAALGRRYDGDERLSVFEFSGYGDFSENHISYLRDSLGAPGPAPDESVAKLGYFSQFRDQ
NITAGSIRQLVEATVKAFPHTQLVTTALNPEIVRQLIADDVTKRLSAPVGIRADCLGVQDPLPAWAERDGSHYVQTKDPL
VGALRDRMAAAPVITEWCQLPAGTDPRSYYEKGLRDVMKYHVSMTSSFNFPAVDASTPMDPALYLLWAQANVVAGYRYSA
EARQGSQSLADGKATLDVTWTNYGSAAATENWVPGYRLVDFSGAVVRTLPARVTLKTLVPGPDGAGKEPAPVSSVETVHI
DLAGVSPGHYTLCAAVGWQQHKPGAEHVVNYPPMRLARDGRDGNGCYPLATLNLAREASTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59045; Mature: 59045

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLALLLDGCGQRGDLGPLSLIASPAIPLSVQDVPNPLRGQYEDLLQPLFPQGNPAQRRY
CCCEEEECCCCCCCCCCHHHHHHCCCCCEEHHCCCCCCCCHHHHHHHHHCCCCCCCCCCC
PAWPASQDASLRVPWRQLQPTDPSSLPPDAPDDRKFDFSVIDDALAKLASRNMRLTLRVV
CCCCCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE
AYNSCCDTVYPNNTNIAMPDWMRPAATNYTGPQRYWWSPGVTQVVPNWNDQNYLNAFGQL
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEECCCCCCCHHHHHHHHH
LAALGRRYDGDERLSVFEFSGYGDFSENHISYLRDSLGAPGPAPDESVAKLGYFSQFRDQ
HHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
NITAGSIRQLVEATVKAFPHTQLVTTALNPEIVRQLIADDVTKRLSAPVGIRADCLGVQD
CCCHHHHHHHHHHHHHHCCCHHEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCC
PLPAWAERDGSHYVQTKDPLVGALRDRMAAAPVITEWCQLPAGTDPRSYYEKGLRDVMKY
CCCHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
HVSMTSSFNFPAVDASTPMDPALYLLWAQANVVAGYRYSAEARQGSQSLADGKATLDVTW
HHHHCCCCCCCCCCCCCCCCCEEEEEEECCCEEECEEECCHHHCCCHHHCCCCEEEEEEE
TNYGSAAATENWVPGYRLVDFSGAVVRTLPARVTLKTLVPGPDGAGKEPAPVSSVETVHI
CCCCCCCCCCCCCCCEEEEECCCHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEE
DLAGVSPGHYTLCAAVGWQQHKPGAEHVVNYPPMRLARDGRDGNGCYPLATLNLAREAST
EEEECCCCCEEEEEECCCCCCCCCHHHCCCCCCHHHHCCCCCCCCCEEEHHHHHHHHCCC
A
C
>Mature Secondary Structure
MCLALLLDGCGQRGDLGPLSLIASPAIPLSVQDVPNPLRGQYEDLLQPLFPQGNPAQRRY
CCCEEEECCCCCCCCCCHHHHHHCCCCCEEHHCCCCCCCCHHHHHHHHHCCCCCCCCCCC
PAWPASQDASLRVPWRQLQPTDPSSLPPDAPDDRKFDFSVIDDALAKLASRNMRLTLRVV
CCCCCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE
AYNSCCDTVYPNNTNIAMPDWMRPAATNYTGPQRYWWSPGVTQVVPNWNDQNYLNAFGQL
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEECCCCCCCHHHHHHHHH
LAALGRRYDGDERLSVFEFSGYGDFSENHISYLRDSLGAPGPAPDESVAKLGYFSQFRDQ
HHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
NITAGSIRQLVEATVKAFPHTQLVTTALNPEIVRQLIADDVTKRLSAPVGIRADCLGVQD
CCCHHHHHHHHHHHHHHCCCHHEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCC
PLPAWAERDGSHYVQTKDPLVGALRDRMAAAPVITEWCQLPAGTDPRSYYEKGLRDVMKY
CCCHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
HVSMTSSFNFPAVDASTPMDPALYLLWAQANVVAGYRYSAEARQGSQSLADGKATLDVTW
HHHHCCCCCCCCCCCCCCCCCEEEEEEECCCEEECEEECCHHHCCCHHHCCCCEEEEEEE
TNYGSAAATENWVPGYRLVDFSGAVVRTLPARVTLKTLVPGPDGAGKEPAPVSSVETVHI
CCCCCCCCCCCCCCCEEEEECCCHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEE
DLAGVSPGHYTLCAAVGWQQHKPGAEHVVNYPPMRLARDGRDGNGCYPLATLNLAREAST
EEEECCCCCEEEEEECCCCCCCCCHHHCCCCCCHHHHCCCCCCCCCEEEHHHHHHHHCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA