Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is rpmF

Identifier: 41407013

GI number: 41407013

Start: 948112

End: 948285

Strand: Direct

Name: rpmF

Synonym: MAP0915

Alternate gene names: 41407013

Gene position: 948112-948285 (Clockwise)

Preceding gene: 41407005

Following gene: 41407014

Centisome position: 19.63

GC content: 68.97

Gene sequence:

>174_bases
ATGGCCGTACCCAAGCGCAGAATGTCGCGCGCGAACACCCGTAGCCGGCGCGCGCAGTGGAAGGCGGAGAAGACCGAGCT
CGTCGGTGTGACGGTGGCAGGTCAGCGGCACAAGGTGCCGCGCAGGCTGCTCAAGGCGGCCCGTCTCGGCCTGATCGATC
TCGACCGCCGCTGA

Upstream 100 bases:

>100_bases
CAACGACTATCCTGATGTCCAATCGTCGCACGTTCGGCCCGACCGGCCACGCCGCGCGACATGCCCGTTCAAGCCCCCGA
CCGAGGAGTTAGGCCCGACC

Downstream 100 bases:

>100_bases
CCTTGATGGCGGCGGCCCGCTGCGCCCGGCTTTCGCCGCGCTGGCGACCGCCGCTGACCTTGATGGCGGCGCGCCTCTCA
GGTCAGTCTCAGGCGGTGGG

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 57; Mature: 56

Protein sequence:

>57_residues
MAVPKRRMSRANTRSRRAQWKAEKTELVGVTVAGQRHKVPRRLLKAARLGLIDLDRR

Sequences:

>Translated_57_residues
MAVPKRRMSRANTRSRRAQWKAEKTELVGVTVAGQRHKVPRRLLKAARLGLIDLDRR
>Mature_56_residues
AVPKRRMSRANTRSRRAQWKAEKTELVGVTVAGQRHKVPRRLLKAARLGLIDLDRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002677 [H]

Pfam domain/function: PF01783 Ribosomal_L32p [H]

EC number: NA

Molecular weight: Translated: 6606; Mature: 6475

Theoretical pI: Translated: 12.66; Mature: 12.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPKRRMSRANTRSRRAQWKAEKTELVGVTVAGQRHKVPRRLLKAARLGLIDLDRR
CCCCHHHHHHCCHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEECCCC
>Mature Secondary Structure 
AVPKRRMSRANTRSRRAQWKAEKTELVGVTVAGQRHKVPRRLLKAARLGLIDLDRR
CCCHHHHHHCCHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA