Definition Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence.
Accession NC_003065
Length 214,233

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The map label for this gene is 41223325

Identifier: 41223325

GI number: 41223325

Start: 65282

End: 65686

Strand: Direct

Name: 41223325

Synonym: Atu6053

Alternate gene names: NA

Gene position: 65282-65686 (Clockwise)

Preceding gene: 16119864

Following gene: 16119869

Centisome position: 30.47

GC content: 53.09

Gene sequence:

>405_bases
ATGACGACCCTTCTCGGCCTCACCTATATCTCAAATGAAAAAGTGCCGCTCGCGGACCTGGACGACTATGTAACCGTCCA
AGTGCCGAGTGCTGGGTTTGATCAGCACCTCGGAAATTATGCACCGTGGTTTTGGTCGATCGATAGGAGAGGGGGCGGCG
GCGTGGATTTCAAGCAAGGGAAATATGACTATTGGGTGCGCCGGATCGGTTCCAACCAACCAATAGGTTTTCCGGTGCTG
TCACCGACCTCAAAAGAGGAGGGCTGGATCTCAGTCATGGACGGCCGACATCGCATAATGGCAATTGTCGATAGCGGTAG
GCAGGCCTTTGCAGCGAGACTTCCCAGATTATTGCTGGGAACGGCGCAAATGACAATTCCAGGCCTCGAAATCTTTGATC
TGTAG

Upstream 100 bases:

>100_bases
TTAAATGGCCGACTTTATGTCGGTGTGTTGGTTTCACCTTCTGACCAGCAAATCATGTGATTTACTACAACCCTATAATT
CCATCAGAGATGCTGGCTCC

Downstream 100 bases:

>100_bases
ACTACAGACGGCGCCGAGGTGCCCCCTGTCAGACTCCTGCGTCGACGACCATCGAAGTCGGGAAGCCACCATGAGGCTTC
GTAATGAACGCCAGGCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MTTLLGLTYISNEKVPLADLDDYVTVQVPSAGFDQHLGNYAPWFWSIDRRGGGGVDFKQGKYDYWVRRIGSNQPIGFPVL
SPTSKEEGWISVMDGRHRIMAIVDSGRQAFAARLPRLLLGTAQMTIPGLEIFDL

Sequences:

>Translated_134_residues
MTTLLGLTYISNEKVPLADLDDYVTVQVPSAGFDQHLGNYAPWFWSIDRRGGGGVDFKQGKYDYWVRRIGSNQPIGFPVL
SPTSKEEGWISVMDGRHRIMAIVDSGRQAFAARLPRLLLGTAQMTIPGLEIFDL
>Mature_133_residues
TTLLGLTYISNEKVPLADLDDYVTVQVPSAGFDQHLGNYAPWFWSIDRRGGGGVDFKQGKYDYWVRRIGSNQPIGFPVLS
PTSKEEGWISVMDGRHRIMAIVDSGRQAFAARLPRLLLGTAQMTIPGLEIFDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14945; Mature: 14814

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLLGLTYISNEKVPLADLDDYVTVQVPSAGFDQHLGNYAPWFWSIDRRGGGGVDFKQG
CCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCEEEEEECCCCCCCCCCCC
KYDYWVRRIGSNQPIGFPVLSPTSKEEGWISVMDGRHRIMAIVDSGRQAFAARLPRLLLG
CHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEECCCEEEEEEEECCHHHHHHHHHHHHHC
TAQMTIPGLEIFDL
CCCCCCCCEEEECC
>Mature Secondary Structure 
TTLLGLTYISNEKVPLADLDDYVTVQVPSAGFDQHLGNYAPWFWSIDRRGGGGVDFKQG
CEEEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCEEEEEECCCCCCCCCCCC
KYDYWVRRIGSNQPIGFPVLSPTSKEEGWISVMDGRHRIMAIVDSGRQAFAARLPRLLLG
CHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEECCCEEEEEEEECCHHHHHHHHHHHHHC
TAQMTIPGLEIFDL
CCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA