Definition | Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence. |
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Accession | NC_003065 |
Length | 214,233 |
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The map label for this gene is 41223325
Identifier: 41223325
GI number: 41223325
Start: 65282
End: 65686
Strand: Direct
Name: 41223325
Synonym: Atu6053
Alternate gene names: NA
Gene position: 65282-65686 (Clockwise)
Preceding gene: 16119864
Following gene: 16119869
Centisome position: 30.47
GC content: 53.09
Gene sequence:
>405_bases ATGACGACCCTTCTCGGCCTCACCTATATCTCAAATGAAAAAGTGCCGCTCGCGGACCTGGACGACTATGTAACCGTCCA AGTGCCGAGTGCTGGGTTTGATCAGCACCTCGGAAATTATGCACCGTGGTTTTGGTCGATCGATAGGAGAGGGGGCGGCG GCGTGGATTTCAAGCAAGGGAAATATGACTATTGGGTGCGCCGGATCGGTTCCAACCAACCAATAGGTTTTCCGGTGCTG TCACCGACCTCAAAAGAGGAGGGCTGGATCTCAGTCATGGACGGCCGACATCGCATAATGGCAATTGTCGATAGCGGTAG GCAGGCCTTTGCAGCGAGACTTCCCAGATTATTGCTGGGAACGGCGCAAATGACAATTCCAGGCCTCGAAATCTTTGATC TGTAG
Upstream 100 bases:
>100_bases TTAAATGGCCGACTTTATGTCGGTGTGTTGGTTTCACCTTCTGACCAGCAAATCATGTGATTTACTACAACCCTATAATT CCATCAGAGATGCTGGCTCC
Downstream 100 bases:
>100_bases ACTACAGACGGCGCCGAGGTGCCCCCTGTCAGACTCCTGCGTCGACGACCATCGAAGTCGGGAAGCCACCATGAGGCTTC GTAATGAACGCCAGGCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MTTLLGLTYISNEKVPLADLDDYVTVQVPSAGFDQHLGNYAPWFWSIDRRGGGGVDFKQGKYDYWVRRIGSNQPIGFPVL SPTSKEEGWISVMDGRHRIMAIVDSGRQAFAARLPRLLLGTAQMTIPGLEIFDL
Sequences:
>Translated_134_residues MTTLLGLTYISNEKVPLADLDDYVTVQVPSAGFDQHLGNYAPWFWSIDRRGGGGVDFKQGKYDYWVRRIGSNQPIGFPVL SPTSKEEGWISVMDGRHRIMAIVDSGRQAFAARLPRLLLGTAQMTIPGLEIFDL >Mature_133_residues TTLLGLTYISNEKVPLADLDDYVTVQVPSAGFDQHLGNYAPWFWSIDRRGGGGVDFKQGKYDYWVRRIGSNQPIGFPVLS PTSKEEGWISVMDGRHRIMAIVDSGRQAFAARLPRLLLGTAQMTIPGLEIFDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14945; Mature: 14814
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLLGLTYISNEKVPLADLDDYVTVQVPSAGFDQHLGNYAPWFWSIDRRGGGGVDFKQG CCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCEEEEEECCCCCCCCCCCC KYDYWVRRIGSNQPIGFPVLSPTSKEEGWISVMDGRHRIMAIVDSGRQAFAARLPRLLLG CHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEECCCEEEEEEEECCHHHHHHHHHHHHHC TAQMTIPGLEIFDL CCCCCCCCEEEECC >Mature Secondary Structure TTLLGLTYISNEKVPLADLDDYVTVQVPSAGFDQHLGNYAPWFWSIDRRGGGGVDFKQG CEEEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCEEEEEECCCCCCCCCCCC KYDYWVRRIGSNQPIGFPVLSPTSKEEGWISVMDGRHRIMAIVDSGRQAFAARLPRLLLG CHHHHHHCCCCCCCCCCEEECCCCCCCCEEEEECCCEEEEEEEECCHHHHHHHHHHHHHC TAQMTIPGLEIFDL CCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA