Definition Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence.
Accession NC_003065
Length 214,233

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The map label for this gene is 16119864

Identifier: 16119864

GI number: 16119864

Start: 64358

End: 65185

Strand: Direct

Name: 16119864

Synonym: Atu6052

Alternate gene names: NA

Gene position: 64358-65185 (Clockwise)

Preceding gene: 16119863

Following gene: 41223325

Centisome position: 30.04

GC content: 59.78

Gene sequence:

>828_bases
ATGCTGGTCGCGATGGCGACGGGCTATCTGGATGCCTCCTTGAACACGACGGCCTATTTTCGGAGTTTGGAGCAGTCGGA
GAAGGTGGGGGTTTCGTTCCTTTTCGGCGAGGCGTTCACGCACTGGTATGCTCAGAGTCAGATGAGCGTGCAGTATCTCG
TGCATGTCGCCGGCCTTGCCTCCTGTCGATGGGGATCCCCAACGGCTCCGGTCGCGCCGAAAGCTGGCGCAGCGCCTCCT
CCTCCAAAATCGCGTCCCGATTTTATCGGCATCAAGCGAAGGGAACGCCATGTGTTCGAGAGCAAGGGTCGCATCCGAGC
GCCAGCCGCAAGCACCGTTGCGAAGGCACTGGGGCAGGTTTCGGCGCTTCACACGGTCAACGGACGGGCGCCGACCACAC
GCTGTGCAAACTTCTTCATGTTCAAGGCCGGTGGTGCAGAGGGCAGAGTGCTGGATCCGCCGGCAAAGGGTGACGGCATC
ACCGTGACGTTTGATCTCTTCGAAGCGATTACACGAGCCTACTCCATTATCCTCGATCAGCCGGTACTTGATCTATCCGA
TCAGGTTGGTGCGGGTTATGTCGGACGCGAGATCGATGATGGTGTGTTCTTGGGTATCGACAAGGAAATCCTTGCCTTGG
TACGAGAGCGGCCCCCGACTGAAGCAACGCGTCGCAGGCGTGTCGCCCAGGTCTTCTCTGCTCTTGAAGATCGGTCGCAG
AACTATGCGGGTCGGCAGGATAGAAGTGTTTCGTCCGGCCTTGACGGGGTCCTGCTTCTTGACCGCCGTTCGCCGCGCGC
CCTTCGACGCTTCCGGACGCAGGGTTAA

Upstream 100 bases:

>100_bases
GTTGCCAGCGACACATGCCGACATCATCCGCTCGTTGCTGACCGTCGGCTATCCCAGCCGTCGAGCCGCTGTCCGCACCG
TTGGCCCCTGGCGGGAGAAA

Downstream 100 bases:

>100_bases
ATGGCCGACTTTATGTCGGTGTGTTGGTTTCACCTTCTGACCAGCAAATCATGTGATTTACTACAACCCTATAATTCCAT
CAGAGATGCTGGCTCCATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MLVAMATGYLDASLNTTAYFRSLEQSEKVGVSFLFGEAFTHWYAQSQMSVQYLVHVAGLASCRWGSPTAPVAPKAGAAPP
PPKSRPDFIGIKRRERHVFESKGRIRAPAASTVAKALGQVSALHTVNGRAPTTRCANFFMFKAGGAEGRVLDPPAKGDGI
TVTFDLFEAITRAYSIILDQPVLDLSDQVGAGYVGREIDDGVFLGIDKEILALVRERPPTEATRRRRVAQVFSALEDRSQ
NYAGRQDRSVSSGLDGVLLLDRRSPRALRRFRTQG

Sequences:

>Translated_275_residues
MLVAMATGYLDASLNTTAYFRSLEQSEKVGVSFLFGEAFTHWYAQSQMSVQYLVHVAGLASCRWGSPTAPVAPKAGAAPP
PPKSRPDFIGIKRRERHVFESKGRIRAPAASTVAKALGQVSALHTVNGRAPTTRCANFFMFKAGGAEGRVLDPPAKGDGI
TVTFDLFEAITRAYSIILDQPVLDLSDQVGAGYVGREIDDGVFLGIDKEILALVRERPPTEATRRRRVAQVFSALEDRSQ
NYAGRQDRSVSSGLDGVLLLDRRSPRALRRFRTQG
>Mature_275_residues
MLVAMATGYLDASLNTTAYFRSLEQSEKVGVSFLFGEAFTHWYAQSQMSVQYLVHVAGLASCRWGSPTAPVAPKAGAAPP
PPKSRPDFIGIKRRERHVFESKGRIRAPAASTVAKALGQVSALHTVNGRAPTTRCANFFMFKAGGAEGRVLDPPAKGDGI
TVTFDLFEAITRAYSIILDQPVLDLSDQVGAGYVGREIDDGVFLGIDKEILALVRERPPTEATRRRRVAQVFSALEDRSQ
NYAGRQDRSVSSGLDGVLLLDRRSPRALRRFRTQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29983; Mature: 29983

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: PS00599 AA_TRANSFER_CLASS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVAMATGYLDASLNTTAYFRSLEQSEKVGVSFLFGEAFTHWYAQSQMSVQYLVHVAGLA
CEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SCRWGSPTAPVAPKAGAAPPPPKSRPDFIGIKRRERHVFESKGRIRAPAASTVAKALGQV
HCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHCCCCEECCHHHHHHHHHHHH
SALHTVNGRAPTTRCANFFMFKAGGAEGRVLDPPAKGDGITVTFDLFEAITRAYSIILDQ
HHHHCCCCCCCHHHHHHEEEEECCCCCCCEECCCCCCCCEEEEHHHHHHHHHHHHHHHCC
PVLDLSDQVGAGYVGREIDDGVFLGIDKEILALVRERPPTEATRRRRVAQVFSALEDRSQ
CCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
NYAGRQDRSVSSGLDGVLLLDRRSPRALRRFRTQG
CCCCCCCCHHHCCCCEEEEEECCCHHHHHHHHCCC
>Mature Secondary Structure
MLVAMATGYLDASLNTTAYFRSLEQSEKVGVSFLFGEAFTHWYAQSQMSVQYLVHVAGLA
CEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SCRWGSPTAPVAPKAGAAPPPPKSRPDFIGIKRRERHVFESKGRIRAPAASTVAKALGQV
HCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHCCCCEECCHHHHHHHHHHHH
SALHTVNGRAPTTRCANFFMFKAGGAEGRVLDPPAKGDGITVTFDLFEAITRAYSIILDQ
HHHHCCCCCCCHHHHHHEEEEECCCCCCCEECCCCCCCCEEEEHHHHHHHHHHHHHHHCC
PVLDLSDQVGAGYVGREIDDGVFLGIDKEILALVRERPPTEATRRRRVAQVFSALEDRSQ
CCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
NYAGRQDRSVSSGLDGVLLLDRRSPRALRRFRTQG
CCCCCCCCHHHCCCCEEEEEECCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA