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The map label for this gene is yhhG [C]

Identifier: 39998071

GI number: 39998071

Start: 3271194

End: 3271613

Strand: Reverse

Name: yhhG [C]

Synonym: GSU2980

Alternate gene names: 39998071

Gene position: 3271613-3271194 (Counterclockwise)

Preceding gene: 39998072

Following gene: 39998070

Centisome position: 85.78

GC content: 60.0

Gene sequence:

>420_bases
ATGGGAGAAACCATCAGATTCGGCGTATCCATCGACGAGAAGCTGCTGGAGAGCTTTGACGGGCTCATCGAGGAGAAGGG
GTACATGAACCGCTCCGAAGCGATCCGCGACCTGATCCGCGCGGCATTGGTGGAGCTGAAGTGGGAAGTGGGAGACGAGG
AGACCGTGGGTACGGTGACGCTCGTCTACGATCACCATGTCCGCGACCTTTCCGATAAGTTGACCGAACAGCAACACGCT
CACCACGACAAGGTCATCTCGGCCCTCCACGTCCATCTGGATGCCCACAACTGTCTGGAGGTCCTGGTGGTGCGCGGCAA
GGCCCGGGAGGTGAAGAAGATCGCCGACGAGCTCATCGGCGTGAAGGGGGTTAAGCACGGCAAGCTGGTCATGACCACCA
CCGGCGAGGAGTTGCACTGA

Upstream 100 bases:

>100_bases
CGGGCACCCACTACGGCGGTTTTCTGTTTATCTCCCGTTGAAAGTGGTCTATCATTTCATCCGTTTTTGTGCTGTTCGCA
TCCCCGCATCGGAGTGTTCT

Downstream 100 bases:

>100_bases
CGCTTTCCGGAGCGCGGCTCATGGATTGCAAAAATATCCCCGTTATGCTCTAATCGTCCGGTGGAATCCAACGTCTTCAT
AGCCCTCGGTTCGAACATGG

Product: nickel responsive regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MGETIRFGVSIDEKLLESFDGLIEEKGYMNRSEAIRDLIRAALVELKWEVGDEETVGTVTLVYDHHVRDLSDKLTEQQHA
HHDKVISALHVHLDAHNCLEVLVVRGKAREVKKIADELIGVKGVKHGKLVMTTTGEELH

Sequences:

>Translated_139_residues
MGETIRFGVSIDEKLLESFDGLIEEKGYMNRSEAIRDLIRAALVELKWEVGDEETVGTVTLVYDHHVRDLSDKLTEQQHA
HHDKVISALHVHLDAHNCLEVLVVRGKAREVKKIADELIGVKGVKHGKLVMTTTGEELH
>Mature_138_residues
GETIRFGVSIDEKLLESFDGLIEEKGYMNRSEAIRDLIRAALVELKWEVGDEETVGTVTLVYDHHVRDLSDKLTEQQHAH
HDKVISALHVHLDAHNCLEVLVVRGKAREVKKIADELIGVKGVKHGKLVMTTTGEELH

Specific function: Transcriptional regulator (Potential)

COG id: COG0864

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory CopG/NikR family

Homologues:

Organism=Escherichia coli, GI1789892, Length=109, Percent_Identity=39.4495412844037, Blast_Score=95, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NIKR_GEOSL (Q748M1)

Other databases:

- EMBL:   AE017180
- RefSeq:   NP_954022.1
- ProteinModelPortal:   Q748M1
- SMR:   Q748M1
- GeneID:   2687357
- GenomeReviews:   AE017180_GR
- KEGG:   gsu:GSU2980
- NMPDR:   fig|243231.1.peg.2960
- TIGR:   GSU2980
- HOGENOM:   HBG646378
- OMA:   CLEVLVV
- ProtClustDB:   PRK04460
- BioCyc:   GSUL243231:GSU_2980-MONOMER
- GO:   GO:0006350
- HAMAP:   MF_00476
- InterPro:   IPR013321
- InterPro:   IPR002145
- InterPro:   IPR022988
- InterPro:   IPR010985
- InterPro:   IPR014864
- Gene3D:   G3DSA:1.10.1220.10
- Gene3D:   G3DSA:3.30.70.1150

Pfam domain/function: PF08753 NikR_C; PF01402 RHH_1; SSF47598 Met_repress_like

EC number: NA

Molecular weight: Translated: 15640; Mature: 15509

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGETIRFGVSIDEKLLESFDGLIEEKGYMNRSEAIRDLIRAALVELKWEVGDEETVGTVT
CCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
LVYDHHVRDLSDKLTEQQHAHHDKVISALHVHLDAHNCLEVLVVRGKAREVKKIADELIG
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHC
VKGVKHGKLVMTTTGEELH
CCCCCCCCEEEEECCCCCC
>Mature Secondary Structure 
GETIRFGVSIDEKLLESFDGLIEEKGYMNRSEAIRDLIRAALVELKWEVGDEETVGTVT
CCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
LVYDHHVRDLSDKLTEQQHAHHDKVISALHVHLDAHNCLEVLVVRGKAREVKKIADELIG
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHC
VKGVKHGKLVMTTTGEELH
CCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA