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The map label for this gene is 39998072

Identifier: 39998072

GI number: 39998072

Start: 3271715

End: 3272584

Strand: Reverse

Name: 39998072

Synonym: GSU2981

Alternate gene names: NA

Gene position: 3272584-3271715 (Counterclockwise)

Preceding gene: 39998073

Following gene: 39998071

Centisome position: 85.8

GC content: 70.69

Gene sequence:

>870_bases
ATGGGCAGCGCCATGCGGTTCAGCGCGGCCACACCCGATCACGCCCCGGCGGAGGCATTGCGTGCCTCCGCCGGGGAGCG
GCGGATTCTGGCCCGTGCGTTCCTCCTGTCAGGGGTGGCCCATGTGGCGGCTGCAGTGTGTGTGATGATGCCGGCTGGGG
GGGGCACGCGGCTTCCTCCTGCCAACATCATCGTCGTTGAGCTGGGTGGTTCGGTCCTGTCTGCGGAGAAGCCGGTACCG
GCCCTTTTGCCTCTGCCGCAACCTTCGCCTGTCCGGCGGCCCCCACTTCCGCTGCCGGTGAAGCCGTCGCCGGTACGGGA
CTCGTCGCCCCCTGTCGCGTTGTCGCCACCATCCGGCCGGACGCAGCCGACAGCCCCTGCCATTGCCCCCCTTGCCGCAG
ATCCGGCAGGTGCGATGGCTCCCTCACCTTCCGCCATGATGGTACCCGTGGCTCCCCCACAACCGGTTCAGGCGGCAGTG
CCGCAGGCACGGGGCGATGGTCCGCAGGTAACGGTGCCGACAGTCCGCAGCCCCGAACCCCCGGCAGCCTCCACCGGTGC
GGCCGATGCCGGCCGGATCCGCGTGGGTTACCAGTCCGTCCTCAGGGGGCTCATCGAGCGGTGCAAGGAATATCCGCCCC
TGGCCCGTCGGGGACGGATGGAGGGAACAGCCGTCGTACGCGTGGTCCTGGCCCGCAGCGGAGCCGTCCGGCGCGATGAG
GTGGCCCGTTCCTCGAGCCACGCGCTCCTGGACAACGCGGCGCTGCGGGCCGTCCGCACAGTGGGCCGCTTCCCCGCCGT
GCCGCCTGAACTCGGCGGCGAGGAGCTCACCTTCGAGGTGCCTATCACCTTCCGGCTCACGGAGAAGTGA

Upstream 100 bases:

>100_bases
CCCATCTTTCCTACCAGCGGGATCCCTTCAGCACCGGGGCCAAGGTGCCGGAGAACGGGAGAAACTACTACCTGACCCTG
GCTTACCGGTTCTGACGGAC

Downstream 100 bases:

>100_bases
CCGGGCACCCACTACGGCGGTTTTCTGTTTATCTCCCGTTGAAAGTGGTCTATCATTTCATCCGTTTTTGTGCTGTTCGC
ATCCCCGCATCGGAGTGTTC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: C-Terminal nB Protein; NB-Dependent Receptor

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MGSAMRFSAATPDHAPAEALRASAGERRILARAFLLSGVAHVAAAVCVMMPAGGGTRLPPANIIVVELGGSVLSAEKPVP
ALLPLPQPSPVRRPPLPLPVKPSPVRDSSPPVALSPPSGRTQPTAPAIAPLAADPAGAMAPSPSAMMVPVAPPQPVQAAV
PQARGDGPQVTVPTVRSPEPPAASTGAADAGRIRVGYQSVLRGLIERCKEYPPLARRGRMEGTAVVRVVLARSGAVRRDE
VARSSSHALLDNAALRAVRTVGRFPAVPPELGGEELTFEVPITFRLTEK

Sequences:

>Translated_289_residues
MGSAMRFSAATPDHAPAEALRASAGERRILARAFLLSGVAHVAAAVCVMMPAGGGTRLPPANIIVVELGGSVLSAEKPVP
ALLPLPQPSPVRRPPLPLPVKPSPVRDSSPPVALSPPSGRTQPTAPAIAPLAADPAGAMAPSPSAMMVPVAPPQPVQAAV
PQARGDGPQVTVPTVRSPEPPAASTGAADAGRIRVGYQSVLRGLIERCKEYPPLARRGRMEGTAVVRVVLARSGAVRRDE
VARSSSHALLDNAALRAVRTVGRFPAVPPELGGEELTFEVPITFRLTEK
>Mature_288_residues
GSAMRFSAATPDHAPAEALRASAGERRILARAFLLSGVAHVAAAVCVMMPAGGGTRLPPANIIVVELGGSVLSAEKPVPA
LLPLPQPSPVRRPPLPLPVKPSPVRDSSPPVALSPPSGRTQPTAPAIAPLAADPAGAMAPSPSAMMVPVAPPQPVQAAVP
QARGDGPQVTVPTVRSPEPPAASTGAADAGRIRVGYQSVLRGLIERCKEYPPLARRGRMEGTAVVRVVLARSGAVRRDEV
ARSSSHALLDNAALRAVRTVGRFPAVPPELGGEELTFEVPITFRLTEK

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29767; Mature: 29636

Theoretical pI: Translated: 11.53; Mature: 11.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSAMRFSAATPDHAPAEALRASAGERRILARAFLLSGVAHVAAAVCVMMPAGGGTRLPP
CCCCEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC
ANIIVVELGGSVLSAEKPVPALLPLPQPSPVRRPPLPLPVKPSPVRDSSPPVALSPPSGR
CCEEEEEECCCEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
TQPTAPAIAPLAADPAGAMAPSPSAMMVPVAPPQPVQAAVPQARGDGPQVTVPTVRSPEP
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCEEEECCCCCCCC
PAASTGAADAGRIRVGYQSVLRGLIERCKEYPPLARRGRMEGTAVVRVVLARSGAVRRDE
CCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCCHHH
VARSSSHALLDNAALRAVRTVGRFPAVPPELGGEELTFEVPITFRLTEK
HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCC
>Mature Secondary Structure 
GSAMRFSAATPDHAPAEALRASAGERRILARAFLLSGVAHVAAAVCVMMPAGGGTRLPP
CCCEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC
ANIIVVELGGSVLSAEKPVPALLPLPQPSPVRRPPLPLPVKPSPVRDSSPPVALSPPSGR
CCEEEEEECCCEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
TQPTAPAIAPLAADPAGAMAPSPSAMMVPVAPPQPVQAAVPQARGDGPQVTVPTVRSPEP
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCEEEECCCCCCCC
PAASTGAADAGRIRVGYQSVLRGLIERCKEYPPLARRGRMEGTAVVRVVLARSGAVRRDE
CCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCCHHH
VARSSSHALLDNAALRAVRTVGRFPAVPPELGGEELTFEVPITFRLTEK
HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA