| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is nifEN [H]
Identifier: 39997899
GI number: 39997899
Start: 3084293
End: 3087052
Strand: Reverse
Name: nifEN [H]
Synonym: GSU2806
Alternate gene names: 39997899
Gene position: 3087052-3084293 (Counterclockwise)
Preceding gene: 39997900
Following gene: 39997898
Centisome position: 80.94
GC content: 64.46
Gene sequence:
>2760_bases ATGGCAAGACCCGATTATTACGACACAACCGACTGCGAAACCCACGAAAAGGGTGCCCCGAAATTCTGCAAGAAATCGGA ACCGGGGGAGGGCACCGAGCGCTCCTGTGCCTATGACGGCGCCCGGGTGGTGCTCATGCCGGTCACCGACGTGATCCATC TGGTGCACGGCCCCATCGCCTGCGCCGGCAACTCCTGGGATAACCGGGGTGCCCGCTCTTCGGGCTCCCAGCTCTACCGC AGGGGCTTTACCACCGAGATGCTGGAAAACGACGTGATCTTCGGCGGCGAGAAGAAGCTCTACCGGGCCATCCTGGAGCT GGCGGAGCGCTATGCGGGCCAGGCAAAGGCCATGTTCGTCTATGCCACCTGCGTCACCGCCATGACCGGCGACGACGTGG AGGCGGTCTGCAAGGCGGCCCAGAAAAAGGTCGCCATCCCCCTGATCCCGGTCAACACTCCCGGCTTCATCGGCGACAAG AACATCGGCAACCGCCTGGCCGGCGAGGTGCTCCTGAAGCACGTCATCGGCACCGCCGAGCCGCCGGTGCTGGGAGAGTA TCCCATCAACCTGATCGGCGAATACAACATCGCCGGCGACCTTTGGGGGATGCTGCCGCTGTTCGACCGGCTCGGTATCC AGATTCTCTCCTGTTTCAGCGGTGACGCCAAATTCGAGGATCTCCGCTACGCCCACCGGGCGAAGCTGAACGTCATCATC TGCTCCAAGAGTCTCACCAACCTCGCCAGGAAGATGCAGAAGAACTACGGCATGCCCTACCTGGAGGAGTCCTTTTACGG CATGACCGACACGGCCAAGGCCCTGCGGGACATCGCCCGGGAGCTGGATGACGCCGTGGGCGGGCTGGAGAAGCGGATCA TGCAGGACCGGGTGGAGAAGCTCCTGGAAGAGGAAGAGGCGCAATGCCGGGAGCGGCTTGCCCCCTACCGGGCACGGCTC GAAGGGAAGCGCTCGGTTCTTTTCACCGGCGGGGTCAAGACCTGGTCCATGGTGAACGCCCTGCGGGAGCTGGGGGTGGA GATCCTGGCCGCCGGCACCCAGAACTCGACCCTGGAGGATTTCTACCGGATGAAGGCCCTCATGCACCAGGATGCCGGGA TCATCGAGGACACTTCCAGCGCCGGGCTCCTCAAGGTCATGTATGACAAGATGCCCGATCTGATCGTTGCCGGCGGGAAG ACCAAGTTCCTGGCCCTGAAAACCAAGACGCCGTTCCTGGATATCAACCATGGGCGTTCCCATCCCTATGCGGGGTACGA GGGGATGGTGACCTTTGCGAAGCAGCTCGACCTGACGGTAAACAACCCCATCTGGCCAGTGTTGAACGCCAAGTCCCCCT GGGAGAAGTCCGATGAGGAACTGGCTGCGAGCGTGGCCAGGGCGGCCGGCCATGCCCGGGCCTACCTGGACGAGGACCTG AAGGATTCACGGGTCAAGGTCCCCACCAAGCCGGCCACGGTGAACCCCCAGAAGAATTCGCCTGCCCTGGGCGCAACGTT GGCTTACCTGGGCATCGACCAGATGCTGGCGCTCCTGCACGGAGCCCAGGGCTGCTCCACCTTCATCCGGCTCCAGCTCT CCCGCCACTTCAAGGAGCCCATCGCCCTCAACTCCACCGCCATGAGCGAGGACACCGCCATCTTCGGCGGCTGGGAGAAC CTGAAGGCGGGGCTCGCGCGGGTCATGGAGAAATTCAGGCCAACGGTGGTCGGCGTCATGACCTCAGGTCTCACGGAAAC CATGGGGGATGACGTCCGGAGCGCCATCCACCAGTTCCGGGAGGAGCACCCGGAGCATGACAACGTGCCCGTGGTTTGGG CGTCCACGCCCGACTACTGCGGTTCGCTCCAGGAGGGATACGCGGCGGCGGTGGAGGCCATTGTCCGGAGCGTGCCGGAG CCCGGCGCATCCATCCCGGACCAGGTGACGGTTCTCCCCGGCGCCCACCTGACCCCCGCCGATGTGGAGGAGGTCCGGGA GATCTGCGAGGCCTTCGGGCTCGATCCCATCATTGTGCCGGACATCGCCAATGCCCTGGACGGCCATATCGACGAAACGG TTTCGCCCCTGTCAACCGGGGGTGTCTCCCCCGAGCGGATCCGTCAGGCCGGCCGCAGCGCCGCCGCCATCTTCATCGGC GACTCGCTGGCAAAGGCGGCAGAAGCGCTCACCACCACCTGCGGCATGCCCAACTACGGTTTCACCTCCCTCACGGGCCT GGCCGAGGTCGACCGCTTCATGGAAACCCTGTCGGCCATTTCGGGCCGGCCGATCCCGGAGAAGTTCAACCGCTGGCGGA GCCGGCTCATGGACGCCATGGTCGACTCCCACTACCAGTTCGGGCTGAAGAAGGTTACCGTTGCCCTGGAAGGCGACAAC CTGAAGGTTCTGACGAATTTCCTGGCAGGCATGGGATGCGAGATCCGGGCGGCCATTGCCGCCACCAGGGTCCGGGGGCT GGACGCCCTCCCGGCCGGGGACGTCTTCGTGGGCGACCTGGAAGACCTGGAGACGACCGCCAAGGGGTGCGACCTGATCG TAGCCAACTCCAACGGCCGCCAGGCCGCGGCCAAACTCGGCATCAAGGCCCATCTGCGGGCCGGGCTTCCGGTTTTCGAC CGCCTCGGCGCCCACCAGAAAATGTGGGTTGGATACCGGGGAACCATGAATCTGCTGTTCGAAACGGCCAACCTGTTCCA GGCCAACGCGGGGGATGCCCAGAAGCTGGCCCATAACTGA
Upstream 100 bases:
>100_bases TTTGAACCATCAGTGAGCAGGGCAGAGACCGACGCGGCAACGACGCCGCCATTCTCCGGAATGGCGGCGTTTTCTTTTGC AGGAAACATTCGAGGTCACC
Downstream 100 bases:
>100_bases TTCGAGCCGAAATGCCTGCCGACTTCGCCGCGGCGCTGCCCGCACGCGCGAATCGGGCGGAGCTCAAGAAAGGAAGAACA CATGAAAGTCGCATTCACAA
Product: bifunctional nitrogenase molybdenum-cofactor biosynthesis protein NifE/NifN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 919; Mature: 918
Protein sequence:
>919_residues MARPDYYDTTDCETHEKGAPKFCKKSEPGEGTERSCAYDGARVVLMPVTDVIHLVHGPIACAGNSWDNRGARSSGSQLYR RGFTTEMLENDVIFGGEKKLYRAILELAERYAGQAKAMFVYATCVTAMTGDDVEAVCKAAQKKVAIPLIPVNTPGFIGDK NIGNRLAGEVLLKHVIGTAEPPVLGEYPINLIGEYNIAGDLWGMLPLFDRLGIQILSCFSGDAKFEDLRYAHRAKLNVII CSKSLTNLARKMQKNYGMPYLEESFYGMTDTAKALRDIARELDDAVGGLEKRIMQDRVEKLLEEEEAQCRERLAPYRARL EGKRSVLFTGGVKTWSMVNALRELGVEILAAGTQNSTLEDFYRMKALMHQDAGIIEDTSSAGLLKVMYDKMPDLIVAGGK TKFLALKTKTPFLDINHGRSHPYAGYEGMVTFAKQLDLTVNNPIWPVLNAKSPWEKSDEELAASVARAAGHARAYLDEDL KDSRVKVPTKPATVNPQKNSPALGATLAYLGIDQMLALLHGAQGCSTFIRLQLSRHFKEPIALNSTAMSEDTAIFGGWEN LKAGLARVMEKFRPTVVGVMTSGLTETMGDDVRSAIHQFREEHPEHDNVPVVWASTPDYCGSLQEGYAAAVEAIVRSVPE PGASIPDQVTVLPGAHLTPADVEEVREICEAFGLDPIIVPDIANALDGHIDETVSPLSTGGVSPERIRQAGRSAAAIFIG DSLAKAAEALTTTCGMPNYGFTSLTGLAEVDRFMETLSAISGRPIPEKFNRWRSRLMDAMVDSHYQFGLKKVTVALEGDN LKVLTNFLAGMGCEIRAAIAATRVRGLDALPAGDVFVGDLEDLETTAKGCDLIVANSNGRQAAAKLGIKAHLRAGLPVFD RLGAHQKMWVGYRGTMNLLFETANLFQANAGDAQKLAHN
Sequences:
>Translated_919_residues MARPDYYDTTDCETHEKGAPKFCKKSEPGEGTERSCAYDGARVVLMPVTDVIHLVHGPIACAGNSWDNRGARSSGSQLYR RGFTTEMLENDVIFGGEKKLYRAILELAERYAGQAKAMFVYATCVTAMTGDDVEAVCKAAQKKVAIPLIPVNTPGFIGDK NIGNRLAGEVLLKHVIGTAEPPVLGEYPINLIGEYNIAGDLWGMLPLFDRLGIQILSCFSGDAKFEDLRYAHRAKLNVII CSKSLTNLARKMQKNYGMPYLEESFYGMTDTAKALRDIARELDDAVGGLEKRIMQDRVEKLLEEEEAQCRERLAPYRARL EGKRSVLFTGGVKTWSMVNALRELGVEILAAGTQNSTLEDFYRMKALMHQDAGIIEDTSSAGLLKVMYDKMPDLIVAGGK TKFLALKTKTPFLDINHGRSHPYAGYEGMVTFAKQLDLTVNNPIWPVLNAKSPWEKSDEELAASVARAAGHARAYLDEDL KDSRVKVPTKPATVNPQKNSPALGATLAYLGIDQMLALLHGAQGCSTFIRLQLSRHFKEPIALNSTAMSEDTAIFGGWEN LKAGLARVMEKFRPTVVGVMTSGLTETMGDDVRSAIHQFREEHPEHDNVPVVWASTPDYCGSLQEGYAAAVEAIVRSVPE PGASIPDQVTVLPGAHLTPADVEEVREICEAFGLDPIIVPDIANALDGHIDETVSPLSTGGVSPERIRQAGRSAAAIFIG DSLAKAAEALTTTCGMPNYGFTSLTGLAEVDRFMETLSAISGRPIPEKFNRWRSRLMDAMVDSHYQFGLKKVTVALEGDN LKVLTNFLAGMGCEIRAAIAATRVRGLDALPAGDVFVGDLEDLETTAKGCDLIVANSNGRQAAAKLGIKAHLRAGLPVFD RLGAHQKMWVGYRGTMNLLFETANLFQANAGDAQKLAHN >Mature_918_residues ARPDYYDTTDCETHEKGAPKFCKKSEPGEGTERSCAYDGARVVLMPVTDVIHLVHGPIACAGNSWDNRGARSSGSQLYRR GFTTEMLENDVIFGGEKKLYRAILELAERYAGQAKAMFVYATCVTAMTGDDVEAVCKAAQKKVAIPLIPVNTPGFIGDKN IGNRLAGEVLLKHVIGTAEPPVLGEYPINLIGEYNIAGDLWGMLPLFDRLGIQILSCFSGDAKFEDLRYAHRAKLNVIIC SKSLTNLARKMQKNYGMPYLEESFYGMTDTAKALRDIARELDDAVGGLEKRIMQDRVEKLLEEEEAQCRERLAPYRARLE GKRSVLFTGGVKTWSMVNALRELGVEILAAGTQNSTLEDFYRMKALMHQDAGIIEDTSSAGLLKVMYDKMPDLIVAGGKT KFLALKTKTPFLDINHGRSHPYAGYEGMVTFAKQLDLTVNNPIWPVLNAKSPWEKSDEELAASVARAAGHARAYLDEDLK DSRVKVPTKPATVNPQKNSPALGATLAYLGIDQMLALLHGAQGCSTFIRLQLSRHFKEPIALNSTAMSEDTAIFGGWENL KAGLARVMEKFRPTVVGVMTSGLTETMGDDVRSAIHQFREEHPEHDNVPVVWASTPDYCGSLQEGYAAAVEAIVRSVPEP GASIPDQVTVLPGAHLTPADVEEVREICEAFGLDPIIVPDIANALDGHIDETVSPLSTGGVSPERIRQAGRSAAAIFIGD SLAKAAEALTTTCGMPNYGFTSLTGLAEVDRFMETLSAISGRPIPEKFNRWRSRLMDAMVDSHYQFGLKKVTVALEGDNL KVLTNFLAGMGCEIRAAIAATRVRGLDALPAGDVFVGDLEDLETTAKGCDLIVANSNGRQAAAKLGIKAHLRAGLPVFDR LGAHQKMWVGYRGTMNLLFETANLFQANAGDAQKLAHN
Specific function: This protein may play a role in the biosynthesis of the prosthetic group of nitrogenase (FeMo cofactor) [H]
COG id: COG2710
COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nifD/nifK/nifE/nifN family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000510 - InterPro: IPR000318 - InterPro: IPR005973 [H]
Pfam domain/function: PF00148 Oxidored_nitro [H]
EC number: NA
Molecular weight: Translated: 100019; Mature: 99887
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS00699 NITROGENASE_1_1 ; PS00090 NITROGENASE_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPDYYDTTDCETHEKGAPKFCKKSEPGEGTERSCAYDGARVVLMPVTDVIHLVHGPIA CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCEE CAGNSWDNRGARSSGSQLYRRGFTTEMLENDVIFGGEKKLYRAILELAERYAGQAKAMFV ECCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCEECCHHHHHHHHHHHHHHHCCCHHHEEH YATCVTAMTGDDVEAVCKAAQKKVAIPLIPVNTPGFIGDKNIGNRLAGEVLLKHVIGTAE HHHHHHHHCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCC PPVLGEYPINLIGEYNIAGDLWGMLPLFDRLGIQILSCFSGDAKFEDLRYAHRAKLNVII CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCEEEEEE CSKSLTNLARKMQKNYGMPYLEESFYGMTDTAKALRDIARELDDAVGGLEKRIMQDRVEK ECHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLEEEEAQCRERLAPYRARLEGKRSVLFTGGVKTWSMVNALRELGVEILAAGTQNSTLED HHHHHHHHHHHHHCHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCHHEEECCCCCCHHHH FYRMKALMHQDAGIIEDTSSAGLLKVMYDKMPDLIVAGGKTKFLALKTKTPFLDINHGRS HHHHHHHHHHCCCCEECCCCCCHHHHHHHCCCCEEEECCCEEEEEEECCCCEEECCCCCC HPYAGYEGMVTFAKQLDLTVNNPIWPVLNAKSPWEKSDEELAASVARAAGHARAYLDEDL CCCCCCHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC KDSRVKVPTKPATVNPQKNSPALGATLAYLGIDQMLALLHGAQGCSTFIRLQLSRHFKEP CCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC IALNSTAMSEDTAIFGGWENLKAGLARVMEKFRPTVVGVMTSGLTETMGDDVRSAIHQFR CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH EEHPEHDNVPVVWASTPDYCGSLQEGYAAAVEAIVRSVPEPGASIPDQVTVLPGAHLTPA HHCCCCCCCCEEECCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCC DVEEVREICEAFGLDPIIVPDIANALDGHIDETVSPLSTGGVSPERIRQAGRSAAAIFIG CHHHHHHHHHHHCCCCEEHHHHHHHHCCHHHHHHCCHHCCCCCHHHHHHCCCCEEEEEEC DSLAKAAEALTTTCGMPNYGFTSLTGLAEVDRFMETLSAISGRPIPEKFNRWRSRLMDAM HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH VDSHYQFGLKKVTVALEGDNLKVLTNFLAGMGCEIRAAIAATRVRGLDALPAGDVFVGDL HHHHHHCCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEECCH EDLETTAKGCDLIVANSNGRQAAAKLGIKAHLRAGLPVFDRLGAHQKMWVGYRGTMNLLF HHHHHHHCCCEEEEECCCCHHHHHHHCHHHHHHCCCCHHHHCCCCCEEEEECCHHHHHHH ETANLFQANAGDAQKLAHN HHHHHHCCCCCCHHHHCCC >Mature Secondary Structure ARPDYYDTTDCETHEKGAPKFCKKSEPGEGTERSCAYDGARVVLMPVTDVIHLVHGPIA CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCCEE CAGNSWDNRGARSSGSQLYRRGFTTEMLENDVIFGGEKKLYRAILELAERYAGQAKAMFV ECCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCEECCHHHHHHHHHHHHHHHCCCHHHEEH YATCVTAMTGDDVEAVCKAAQKKVAIPLIPVNTPGFIGDKNIGNRLAGEVLLKHVIGTAE HHHHHHHHCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCC PPVLGEYPINLIGEYNIAGDLWGMLPLFDRLGIQILSCFSGDAKFEDLRYAHRAKLNVII CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCEEEEEE CSKSLTNLARKMQKNYGMPYLEESFYGMTDTAKALRDIARELDDAVGGLEKRIMQDRVEK ECHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLEEEEAQCRERLAPYRARLEGKRSVLFTGGVKTWSMVNALRELGVEILAAGTQNSTLED HHHHHHHHHHHHHCHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCHHEEECCCCCCHHHH FYRMKALMHQDAGIIEDTSSAGLLKVMYDKMPDLIVAGGKTKFLALKTKTPFLDINHGRS HHHHHHHHHHCCCCEECCCCCCHHHHHHHCCCCEEEECCCEEEEEEECCCCEEECCCCCC HPYAGYEGMVTFAKQLDLTVNNPIWPVLNAKSPWEKSDEELAASVARAAGHARAYLDEDL CCCCCCHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC KDSRVKVPTKPATVNPQKNSPALGATLAYLGIDQMLALLHGAQGCSTFIRLQLSRHFKEP CCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC IALNSTAMSEDTAIFGGWENLKAGLARVMEKFRPTVVGVMTSGLTETMGDDVRSAIHQFR CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH EEHPEHDNVPVVWASTPDYCGSLQEGYAAAVEAIVRSVPEPGASIPDQVTVLPGAHLTPA HHCCCCCCCCEEECCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCC DVEEVREICEAFGLDPIIVPDIANALDGHIDETVSPLSTGGVSPERIRQAGRSAAAIFIG CHHHHHHHHHHHCCCCEEHHHHHHHHCCHHHHHHCCHHCCCCCHHHHHHCCCCEEEEEEC DSLAKAAEALTTTCGMPNYGFTSLTGLAEVDRFMETLSAISGRPIPEKFNRWRSRLMDAM HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH VDSHYQFGLKKVTVALEGDNLKVLTNFLAGMGCEIRAAIAATRVRGLDALPAGDVFVGDL HHHHHHCCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEECCH EDLETTAKGCDLIVANSNGRQAAAKLGIKAHLRAGLPVFDRLGAHQKMWVGYRGTMNLLF HHHHHHHCCCEEEEECCCCHHHHHHHCHHHHHHCCCCHHHHCCCCCEEEEECCHHHHHHH ETANLFQANAGDAQKLAHN HHHHHHCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]