Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
---|---|
Accession | NC_002939 |
Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is cysU [H]
Identifier: 39997795
GI number: 39997795
Start: 2980760
End: 2981446
Strand: Direct
Name: cysU [H]
Synonym: GSU2701
Alternate gene names: 39997795
Gene position: 2980760-2981446 (Clockwise)
Preceding gene: 39997794
Following gene: 39997796
Centisome position: 78.15
GC content: 65.65
Gene sequence:
>687_bases ATGGACTTTTATTCCGAATCCCTGACGACCGCCCTCCAGCTCATTGCCTCCCGCGACCCGGACGTGGTGAGCGCGGTGAC CGTGTCGATCGTCGTCTCGCTCTGGTCGACCCTGTTCGCTGCCCTGGCCGGCGTGCCTGCGGGAGTGGCGGTGGCGGTGG CTGAGTTTCCCGGCAAGCGGGCCGTGGTGACGCTGCTCAACACCCTCATGGCCCTGCCCACGGTGGTGGTGGGACTCTTT GTCTACAGCCTCATCAGCCGCCAGGGACCCTTGGGCGAATTCGGCCTTCTCTTCACCCCCTGGGCCATGGTCGTGGGTCA GACGCTCCTGGCCATCCCCATCGTGGCGAACCTGACCATGAGCGCCATCAAGGGTGCCGATCCCCGCATCGTCCCAACGG CCCTCACCCTGGGCGCCGGGCCGTTCGAAAGTATCCGACGACTGGTACTGGAAATGCGTTTCGGCATCATGGCCGCGCTC ATTGCCGCCTTTGGCCGGGTCATCGCCGAGGTGGGAGTTGCCATGATGCTCGGCGGCAACATCCGGGGCCATACCCGGAC CATGACGACCGCCATCGCCATGGAGACCGGCAAGGGGGAATTCGCCCTGGGGCTCGCCCTGGGGCTCATCCTCATGGCGG TCGCGCTGATCGTCAACATGGCTCTCAACGCCCTGCAGCAGAGGTGA
Upstream 100 bases:
>100_bases GCCGGTCTTCTTTATTTACAAGAAATAGAAATCATCATAGCATTGAACCGCTGATCGGGGGTATCTGTGACCGGTCAGCG GTTCGCTTTCATCCGAAGCC
Downstream 100 bases:
>100_bases CAGCACCATGAGCGAATGCATCCGGCTCACCAACATACGCACTACCTACGCCGGCCGGACCGTCCTTGCCATTGACCGGC TCACGCTGCGCAGCGGCAGA
Product: ABC transporter permease
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MDFYSESLTTALQLIASRDPDVVSAVTVSIVVSLWSTLFAALAGVPAGVAVAVAEFPGKRAVVTLLNTLMALPTVVVGLF VYSLISRQGPLGEFGLLFTPWAMVVGQTLLAIPIVANLTMSAIKGADPRIVPTALTLGAGPFESIRRLVLEMRFGIMAAL IAAFGRVIAEVGVAMMLGGNIRGHTRTMTTAIAMETGKGEFALGLALGLILMAVALIVNMALNALQQR
Sequences:
>Translated_228_residues MDFYSESLTTALQLIASRDPDVVSAVTVSIVVSLWSTLFAALAGVPAGVAVAVAEFPGKRAVVTLLNTLMALPTVVVGLF VYSLISRQGPLGEFGLLFTPWAMVVGQTLLAIPIVANLTMSAIKGADPRIVPTALTLGAGPFESIRRLVLEMRFGIMAAL IAAFGRVIAEVGVAMMLGGNIRGHTRTMTTAIAMETGKGEFALGLALGLILMAVALIVNMALNALQQR >Mature_228_residues MDFYSESLTTALQLIASRDPDVVSAVTVSIVVSLWSTLFAALAGVPAGVAVAVAEFPGKRAVVTLLNTLMALPTVVVGLF VYSLISRQGPLGEFGLLFTPWAMVVGQTLLAIPIVANLTMSAIKGADPRIVPTALTLGAGPFESIRRLVLEMRFGIMAAL IAAFGRVIAEVGVAMMLGGNIRGHTRTMTTAIAMETGKGEFALGLALGLILMAVALIVNMALNALQQR
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4662
COG function: function code H; ABC-type tungstate transport system, periplasmic component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=217, Percent_Identity=25.8064516129032, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI87082099, Length=198, Percent_Identity=25.2525252525253, Blast_Score=61, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011865 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 23795; Mature: 23795
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFYSESLTTALQLIASRDPDVVSAVTVSIVVSLWSTLFAALAGVPAGVAVAVAEFPGKR CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCH AVVTLLNTLMALPTVVVGLFVYSLISRQGPLGEFGLLFTPWAMVVGQTLLAIPIVANLTM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SAIKGADPRIVPTALTLGAGPFESIRRLVLEMRFGIMAALIAAFGRVIAEVGVAMMLGGN HHHCCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IRGHTRTMTTAIAMETGKGEFALGLALGLILMAVALIVNMALNALQQR CCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDFYSESLTTALQLIASRDPDVVSAVTVSIVVSLWSTLFAALAGVPAGVAVAVAEFPGKR CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCH AVVTLLNTLMALPTVVVGLFVYSLISRQGPLGEFGLLFTPWAMVVGQTLLAIPIVANLTM HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SAIKGADPRIVPTALTLGAGPFESIRRLVLEMRFGIMAALIAAFGRVIAEVGVAMMLGGN HHHCCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IRGHTRTMTTAIAMETGKGEFALGLALGLILMAVALIVNMALNALQQR CCCCHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2188958; 9205837; 9278503; 2188959 [H]