Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
---|---|
Accession | NC_002939 |
Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is 39997794
Identifier: 39997794
GI number: 39997794
Start: 2979878
End: 2980687
Strand: Direct
Name: 39997794
Synonym: GSU2700
Alternate gene names: NA
Gene position: 2979878-2980687 (Clockwise)
Preceding gene: 39997793
Following gene: 39997795
Centisome position: 78.13
GC content: 57.9
Gene sequence:
>810_bases ATGAAAATGTATCGTTCGTTCGCGGCAACCCTCGTTGCACTCCTCATGCTCGTTACCGTTGCCGGCGCCGAGGAGCGCCT CAAGATGTCCACCACAACCTCCACCCAGGACTCGGGACTGCTCAAAGTTCTTCTTCCCCCGTTCGAGAAGAAGAACAATG TCAAAGTCGACGTGATAGCCGTGGGCACCGGCCAGGCCCTGAAACTGGGCGAAGCGGGCGATGTTGATGTGGTCTTCGTT CATGCCCGCAAGCTGGAAGACAAGTTCGTGGCCGACGGCTTCGGCGTGAACCGCAAAGACGTCATGTACAACGACTTCGT CATCGTCGGCCCGAAAAACGATCCGGCAGGCATCGCCAAGGCGAAGACCGCCGCAGAGGCCCTGAAGCTGCTCGCGACAA AAGGAGCCACCTTCATTTCCCGGGGCGACAAGTCGGGCACTCACACCAAGGAACTTGACCTCTGGAAGTCCGCCGGCGTT GATCCTAAAGGAAACTGGTATGTAGAAGCAGGCCAGGGCATGGGACCGGTCATCACCATGGCCACCGAGCGGCGCGCCTA CACCCTGACCGACCGGGGGACCTACAACGCCTTCAAGGGCGCCAAAACCGACCTCGTGATCCTGTTCCAGGGTGAAAAAG GGCTCTTCAACCCCTACGGGATCATGGCCGTCAATCCGAAAAAATTCCCCCACGTCAAATATGACCTGGCCATGAAACTC ATCGACTACGTCACCGGCCCGGAGGGGCTGAAGATCATCTCCGACTACAAGGCCCACGGCGAGCCGGTCTTCTTTATTTA CAAGAAATAG
Upstream 100 bases:
>100_bases GCCTGTCGGCACGGCATCGCCCGTCTCAAGAAAATGTCGACCGTTCACAAGCGGGAGAAGTTTGTAGAGTAGAAGCAATC CACCCAAAGGAGACTCGCCC
Downstream 100 bases:
>100_bases AAATCATCATAGCATTGAACCGCTGATCGGGGGTATCTGTGACCGGTCAGCGGTTCGCTTTCATCCGAAGCCATGGACTT TTATTCCGAATCCCTGACGA
Product: tungstate ABC transporter periplasmic tungstate-binding protein
Products: NA
Alternate protein names: Signal Peptide Protein; TUNGstate ABC Transporter Permease; Molybdate Or TUNGstate Transport; TUNGstate ABC Transporter Permease-Like Protein; TUNGstate Abc Transporter Permease; Signal Peptide; ABC-Type Transport Protein Permease Component; ABC Transporter; Basic Organic Compound ABC-Transporter; ABC Transporter Permease Protein; ABC TUNGstate Transporter Permease Component; ABC-Type Transport System Permease Component; ABC Transporter Periplasmic Protein; ABC-Type TUNGstate Transport System Permease Component-Like; Periplasmic Protein
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MKMYRSFAATLVALLMLVTVAGAEERLKMSTTTSTQDSGLLKVLLPPFEKKNNVKVDVIAVGTGQALKLGEAGDVDVVFV HARKLEDKFVADGFGVNRKDVMYNDFVIVGPKNDPAGIAKAKTAAEALKLLATKGATFISRGDKSGTHTKELDLWKSAGV DPKGNWYVEAGQGMGPVITMATERRAYTLTDRGTYNAFKGAKTDLVILFQGEKGLFNPYGIMAVNPKKFPHVKYDLAMKL IDYVTGPEGLKIISDYKAHGEPVFFIYKK
Sequences:
>Translated_269_residues MKMYRSFAATLVALLMLVTVAGAEERLKMSTTTSTQDSGLLKVLLPPFEKKNNVKVDVIAVGTGQALKLGEAGDVDVVFV HARKLEDKFVADGFGVNRKDVMYNDFVIVGPKNDPAGIAKAKTAAEALKLLATKGATFISRGDKSGTHTKELDLWKSAGV DPKGNWYVEAGQGMGPVITMATERRAYTLTDRGTYNAFKGAKTDLVILFQGEKGLFNPYGIMAVNPKKFPHVKYDLAMKL IDYVTGPEGLKIISDYKAHGEPVFFIYKK >Mature_269_residues MKMYRSFAATLVALLMLVTVAGAEERLKMSTTTSTQDSGLLKVLLPPFEKKNNVKVDVIAVGTGQALKLGEAGDVDVVFV HARKLEDKFVADGFGVNRKDVMYNDFVIVGPKNDPAGIAKAKTAAEALKLLATKGATFISRGDKSGTHTKELDLWKSAGV DPKGNWYVEAGQGMGPVITMATERRAYTLTDRGTYNAFKGAKTDLVILFQGEKGLFNPYGIMAVNPKKFPHVKYDLAMKL IDYVTGPEGLKIISDYKAHGEPVFFIYKK
Specific function: Unknown
COG id: COG2998
COG function: function code H; ABC-type tungstate transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29332; Mature: 29332
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMYRSFAATLVALLMLVTVAGAEERLKMSTTTSTQDSGLLKVLLPPFEKKNNVKVDVIA CCHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEE VGTGQALKLGEAGDVDVVFVHARKLEDKFVADGFGVNRKDVMYNDFVIVGPKNDPAGIAK ECCCCEEEECCCCCEEEEEEEEECCCCHHEECCCCCCCCCEEEECEEEECCCCCCCCHHH AKTAAEALKLLATKGATFISRGDKSGTHTKELDLWKSAGVDPKGNWYVEAGQGMGPVITM HHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCEEEE ATERRAYTLTDRGTYNAFKGAKTDLVILFQGEKGLFNPYGIMAVNPKKFPHVKYDLAMKL EECCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHH IDYVTGPEGLKIISDYKAHGEPVFFIYKK HHHHCCCCCEEEEECCCCCCCEEEEEEEC >Mature Secondary Structure MKMYRSFAATLVALLMLVTVAGAEERLKMSTTTSTQDSGLLKVLLPPFEKKNNVKVDVIA CCHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEEE VGTGQALKLGEAGDVDVVFVHARKLEDKFVADGFGVNRKDVMYNDFVIVGPKNDPAGIAK ECCCCEEEECCCCCEEEEEEEEECCCCHHEECCCCCCCCCEEEECEEEECCCCCCCCHHH AKTAAEALKLLATKGATFISRGDKSGTHTKELDLWKSAGVDPKGNWYVEAGQGMGPVITM HHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCEEEE ATERRAYTLTDRGTYNAFKGAKTDLVILFQGEKGLFNPYGIMAVNPKKFPHVKYDLAMKL EECCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHH IDYVTGPEGLKIISDYKAHGEPVFFIYKK HHHHCCCCCEEEEECCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA