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The map label for this gene is bphB [H]

Identifier: 39997660

GI number: 39997660

Start: 2827104

End: 2827871

Strand: Direct

Name: bphB [H]

Synonym: GSU2565

Alternate gene names: 39997660

Gene position: 2827104-2827871 (Clockwise)

Preceding gene: 39997659

Following gene: 39997662

Centisome position: 74.12

GC content: 62.76

Gene sequence:

>768_bases
ATGAATGACCGGAGCCACACCGGCGAAGAGGAACTGCGCTGCCGCGTGCAGGAGCTGGAGCACCGGGTTACCGAGCTCAC
CGAGGCCCTTGACGCCTCAAACCGCGAATTGCAGACCTTCAGTTACTCGGTTTCCCACGACCTGCGCGCCCCCCTGACCA
TCATCGACGGATTCGCTCGGGCCCTCATGGAAGACTGCGTCGAACAACTCGACGCCCAGGGGCAGGACTACCTCAAGCGG
ATCAGGATCGCCAGCCAGCGGATGGGCAACCTCATCAACGGGCTGCTGAACCTCTCCCGCATCGCCCGCGAGCCGCTCTG
CTCCGGTACCGCCAACCTGAGCGAGATGGTGCGAACCATCGAGATGGAGCTCAGGTATCTGCACCCGGAGCGCAGCGTAC
TGTTCACCATCGAGGACGGTGTTACGGCGCAGGGAGACCGCCGGATGCTCCGTACGGTGATGGACAACCTGCTGCGCAAT
GCCTGGAAGTTCACGGTGGCCCGCGATCCCGCCCACATTTCCTTCGGTGTCTGCGTACAGGAGGGGAAAACGGCATATTT
CGTGAAAGACGATGGTGCCGGGTTCGACATGGCCTTTGCCGACCGTCTGTTCATCCCCTTCCAGCGCATGCATCAGGGCA
GCGAGTTCGAGGGGGTGGGCATCGGCCTTGCTACGGCCCACCGGATCATCCAACGCCACGGCGGCAGAATATGGGCCGAG
GCGGCGCCCGATGCGGGAGCGACGTTTTATTTCACTCTGACCGGGTAA

Upstream 100 bases:

>100_bases
GGGCTCTGGACCCGGACGGCATCGACGGCTTCCGGGAGTTCCGGGAACTCGCCGACATCCGCCGGATCAACGAACTGCTG
GACCGTCATGGGGACCCGGC

Downstream 100 bases:

>100_bases
ATCCCGACAGCTCTCCAGGACGCATCAGCGGGAGGCAGCCCCATGACTCTTCCCTTCCTGACCATCAGGATCAAGCTTAT
CTCCATCATCGGGTTCTTCC

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MNDRSHTGEEELRCRVQELEHRVTELTEALDASNRELQTFSYSVSHDLRAPLTIIDGFARALMEDCVEQLDAQGQDYLKR
IRIASQRMGNLINGLLNLSRIAREPLCSGTANLSEMVRTIEMELRYLHPERSVLFTIEDGVTAQGDRRMLRTVMDNLLRN
AWKFTVARDPAHISFGVCVQEGKTAYFVKDDGAGFDMAFADRLFIPFQRMHQGSEFEGVGIGLATAHRIIQRHGGRIWAE
AAPDAGATFYFTLTG

Sequences:

>Translated_255_residues
MNDRSHTGEEELRCRVQELEHRVTELTEALDASNRELQTFSYSVSHDLRAPLTIIDGFARALMEDCVEQLDAQGQDYLKR
IRIASQRMGNLINGLLNLSRIAREPLCSGTANLSEMVRTIEMELRYLHPERSVLFTIEDGVTAQGDRRMLRTVMDNLLRN
AWKFTVARDPAHISFGVCVQEGKTAYFVKDDGAGFDMAFADRLFIPFQRMHQGSEFEGVGIGLATAHRIIQRHGGRIWAE
AAPDAGATFYFTLTG
>Mature_255_residues
MNDRSHTGEEELRCRVQELEHRVTELTEALDASNRELQTFSYSVSHDLRAPLTIIDGFARALMEDCVEQLDAQGQDYLKR
IRIASQRMGNLINGLLNLSRIAREPLCSGTANLSEMVRTIEMELRYLHPERSVLFTIEDGVTAQGDRRMLRTVMDNLLRN
AWKFTVARDPAHISFGVCVQEGKTAYFVKDDGAGFDMAFADRLFIPFQRMHQGSEFEGVGIGLATAHRIIQRHGGRIWAE
AAPDAGATFYFTLTG

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI48994928, Length=239, Percent_Identity=28.8702928870293, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI1786600, Length=221, Percent_Identity=28.5067873303167, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1786912, Length=221, Percent_Identity=32.1266968325792, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1788549, Length=215, Percent_Identity=28.3720930232558, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87081816, Length=259, Percent_Identity=28.1853281853282, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI145693157, Length=248, Percent_Identity=26.6129032258064, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1790346, Length=263, Percent_Identity=27.7566539923954, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1787894, Length=257, Percent_Identity=26.0700389105058, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1790551, Length=251, Percent_Identity=26.2948207171315, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 28768; Mature: 28768

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDRSHTGEEELRCRVQELEHRVTELTEALDASNRELQTFSYSVSHDLRAPLTIIDGFAR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCCCHHHHHHHHH
ALMEDCVEQLDAQGQDYLKRIRIASQRMGNLINGLLNLSRIAREPLCSGTANLSEMVRTI
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
EMELRYLHPERSVLFTIEDGVTAQGDRRMLRTVMDNLLRNAWKFTVARDPAHISFGVCVQ
HHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEEEE
EGKTAYFVKDDGAGFDMAFADRLFIPFQRMHQGSEFEGVGIGLATAHRIIQRHGGRIWAE
CCCEEEEEECCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCEEEEE
AAPDAGATFYFTLTG
CCCCCCCEEEEEECC
>Mature Secondary Structure
MNDRSHTGEEELRCRVQELEHRVTELTEALDASNRELQTFSYSVSHDLRAPLTIIDGFAR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCCCHHHHHHHHH
ALMEDCVEQLDAQGQDYLKRIRIASQRMGNLINGLLNLSRIAREPLCSGTANLSEMVRTI
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
EMELRYLHPERSVLFTIEDGVTAQGDRRMLRTVMDNLLRNAWKFTVARDPAHISFGVCVQ
HHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEEEE
EGKTAYFVKDDGAGFDMAFADRLFIPFQRMHQGSEFEGVGIGLATAHRIIQRHGGRIWAE
CCCEEEEEECCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCEEEEE
AAPDAGATFYFTLTG
CCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]