Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997659
Identifier: 39997659
GI number: 39997659
Start: 2825830
End: 2827107
Strand: Direct
Name: 39997659
Synonym: GSU2564
Alternate gene names: NA
Gene position: 2825830-2827107 (Clockwise)
Preceding gene: 39997658
Following gene: 39997660
Centisome position: 74.09
GC content: 65.41
Gene sequence:
>1278_bases ATGGGACGTGATGGCAGCAAGGTAGTCAGTCTGGAGGAGGAGCGCACCCGCCGCGCCATGGTCGGTAAAGCGACGGGCCC CGATGCGGAGGCGGCGTCTGCAGTCCCCGGCGGGGCCACCGCCTGGAAGCAGATGAACGCCCTCCTCGCCGACCCTCGCG CCCGGGAGGTGGTGCGCGCGCTGCCGGAGCAGCAGTTTTACTGGATACTGACCGAGGTGGGAATGACCGACGCCGTGGAG TTCTGGGAACTGGCGTCGCCGCGGCAGCGGATGTTCATTCTGGACATGGAGCTCTGGGACTCGTGGAATTTTTCCGAAGC GAAATCACACCAGTGGCTCAACCACCTGCTGGAGGCGGGCGAAGAGGCCGTGCTGGAGCAGCTGCCCCACATGGACGCGG AACTTCTCATTCTAATGTTCAAGAAGGAGATCATCGTCGGCGGCGGTATCGGCGACCTGGTCTCCGACGAAGAGCGGGTG GCCGACTGGGACCACAGCTTCGACAACGTCTACTTCTTAACCTTCCGCAACGCCGAACGGGCCCGCGCCGTGGGGACCTT CATCGATATCATCTTCCGCAACGACCGGGAGCTCTACCTGGGGCTCATGGAGGGGATCAAAGTGGAGCTGGAGAGCGAGC TGGAAGAGCTCGCCTACCGCTTCCGCTCGGGCCGGCTCGCCGACCTGGGGTTCCCCGAGCTGGAGGATGCCCTTACCATC TATGCCCGGCTCTCTCCCGACAGCTTCATCCCCTCAGCCGAAAAGCGACTAGACCTGGCCTCGGGTATAACCGGCCTCCC CATGCCGGCGGGATACGAGGAGTCATTCCTCAACCGTGCCCTGGCCCGGGTGGAGGGTCCGGTGGATCAGGAGCTCACCG CCCTCGTCAACAGCGCCCTGGTGGCCGACGGCGCCGCCCTCCGCTCCCGCGAAGGAATGGAGGCGATCTTCCGGCGGGTC CACGGTTACCTCTCCATCGCCCTTGAACACCTGTCAGACGGCGACGTGGAACGGGCCGCCGCGATCATCGGCCGGGAATA CCTCTCCCGCCTCTTCCGGCTCGGCTTCGGCATGGTCATGGAACTGCGCAAGCACCACGAATCGCTGGTGATCGACGATT ACGCCACCGGCAGGGTGATCGAGGGGCTGCGGGCCACGCCGCCCCGCTTCTACCGGGCTCTGGACCCGGACGGCATCGAC GGCTTCCGGGAGTTCCGGGAACTCGCCGACATCCGCCGGATCAACGAACTGCTGGACCGTCATGGGGACCCGGCATGA
Upstream 100 bases:
>100_bases AGGTCAGAATGAACGGACGCAACAAGGGGAAAAGGGGCTGAGCCGGAGACGCGCCCGCACATCGCACGTTGCAACGAACA GGGAAGGGAGTTTTCAGGAA
Downstream 100 bases:
>100_bases ATGACCGGAGCCACACCGGCGAAGAGGAACTGCGCTGCCGCGTGCAGGAGCTGGAGCACCGGGTTACCGAGCTCACCGAG GCCCTTGACGCCTCAAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MGRDGSKVVSLEEERTRRAMVGKATGPDAEAASAVPGGATAWKQMNALLADPRAREVVRALPEQQFYWILTEVGMTDAVE FWELASPRQRMFILDMELWDSWNFSEAKSHQWLNHLLEAGEEAVLEQLPHMDAELLILMFKKEIIVGGGIGDLVSDEERV ADWDHSFDNVYFLTFRNAERARAVGTFIDIIFRNDRELYLGLMEGIKVELESELEELAYRFRSGRLADLGFPELEDALTI YARLSPDSFIPSAEKRLDLASGITGLPMPAGYEESFLNRALARVEGPVDQELTALVNSALVADGAALRSREGMEAIFRRV HGYLSIALEHLSDGDVERAAAIIGREYLSRLFRLGFGMVMELRKHHESLVIDDYATGRVIEGLRATPPRFYRALDPDGID GFREFRELADIRRINELLDRHGDPA
Sequences:
>Translated_425_residues MGRDGSKVVSLEEERTRRAMVGKATGPDAEAASAVPGGATAWKQMNALLADPRAREVVRALPEQQFYWILTEVGMTDAVE FWELASPRQRMFILDMELWDSWNFSEAKSHQWLNHLLEAGEEAVLEQLPHMDAELLILMFKKEIIVGGGIGDLVSDEERV ADWDHSFDNVYFLTFRNAERARAVGTFIDIIFRNDRELYLGLMEGIKVELESELEELAYRFRSGRLADLGFPELEDALTI YARLSPDSFIPSAEKRLDLASGITGLPMPAGYEESFLNRALARVEGPVDQELTALVNSALVADGAALRSREGMEAIFRRV HGYLSIALEHLSDGDVERAAAIIGREYLSRLFRLGFGMVMELRKHHESLVIDDYATGRVIEGLRATPPRFYRALDPDGID GFREFRELADIRRINELLDRHGDPA >Mature_424_residues GRDGSKVVSLEEERTRRAMVGKATGPDAEAASAVPGGATAWKQMNALLADPRAREVVRALPEQQFYWILTEVGMTDAVEF WELASPRQRMFILDMELWDSWNFSEAKSHQWLNHLLEAGEEAVLEQLPHMDAELLILMFKKEIIVGGGIGDLVSDEERVA DWDHSFDNVYFLTFRNAERARAVGTFIDIIFRNDRELYLGLMEGIKVELESELEELAYRFRSGRLADLGFPELEDALTIY ARLSPDSFIPSAEKRLDLASGITGLPMPAGYEESFLNRALARVEGPVDQELTALVNSALVADGAALRSREGMEAIFRRVH GYLSIALEHLSDGDVERAAAIIGREYLSRLFRLGFGMVMELRKHHESLVIDDYATGRVIEGLRATPPRFYRALDPDGIDG FREFRELADIRRINELLDRHGDPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47900; Mature: 47769
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRDGSKVVSLEEERTRRAMVGKATGPDAEAASAVPGGATAWKQMNALLADPRAREVVRA CCCCCCCEEECHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHH LPEQQFYWILTEVGMTDAVEFWELASPRQRMFILDMELWDSWNFSEAKSHQWLNHLLEAG CCCCCEEEEEHHCCCHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHCC EEAVLEQLPHMDAELLILMFKKEIIVGGGIGDLVSDEERVADWDHSFDNVYFLTFRNAER HHHHHHHCCCCCHHHHHHHHHHHHEECCCCHHHCCCHHHHHHCCCCCCCEEEEEECCCHH ARAVGTFIDIIFRNDRELYLGLMEGIKVELESELEELAYRFRSGRLADLGFPELEDALTI HHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEE YARLSPDSFIPSAEKRLDLASGITGLPMPAGYEESFLNRALARVEGPVDQELTALVNSAL EEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH VADGAALRSREGMEAIFRRVHGYLSIALEHLSDGDVERAAAIIGREYLSRLFRLGFGMVM HHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ELRKHHESLVIDDYATGRVIEGLRATPPRFYRALDPDGIDGFREFRELADIRRINELLDR HHHHHCCCEEEECCCCCHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC HGDPA CCCCC >Mature Secondary Structure GRDGSKVVSLEEERTRRAMVGKATGPDAEAASAVPGGATAWKQMNALLADPRAREVVRA CCCCCCEEECHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHH LPEQQFYWILTEVGMTDAVEFWELASPRQRMFILDMELWDSWNFSEAKSHQWLNHLLEAG CCCCCEEEEEHHCCCHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHCC EEAVLEQLPHMDAELLILMFKKEIIVGGGIGDLVSDEERVADWDHSFDNVYFLTFRNAER HHHHHHHCCCCCHHHHHHHHHHHHEECCCCHHHCCCHHHHHHCCCCCCCEEEEEECCCHH ARAVGTFIDIIFRNDRELYLGLMEGIKVELESELEELAYRFRSGRLADLGFPELEDALTI HHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEE YARLSPDSFIPSAEKRLDLASGITGLPMPAGYEESFLNRALARVEGPVDQELTALVNSAL EEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH VADGAALRSREGMEAIFRRVHGYLSIALEHLSDGDVERAAAIIGREYLSRLFRLGFGMVM HHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ELRKHHESLVIDDYATGRVIEGLRATPPRFYRALDPDGIDGFREFRELADIRRINELLDR HHHHHCCCEEEECCCCCHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC HGDPA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA