Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is metG [H]
Identifier: 39997330
GI number: 39997330
Start: 2447694
End: 2449226
Strand: Direct
Name: metG [H]
Synonym: GSU2232
Alternate gene names: 39997330
Gene position: 2447694-2449226 (Clockwise)
Preceding gene: 39997329
Following gene: 39997332
Centisome position: 64.17
GC content: 59.43
Gene sequence:
>1533_bases ATGAGCCGAACGTTCTATGTCACGACACCCATCTACTACGTAAACGACGTACCGCACATCGGCCACGCCTACACCACCCT TGCAGCAGACGTTCTCGCCCGCTACAAGAAGCTCAAGGGGTACGAGGTCTTCTTCCTCACCGGCACCGACGAACATGGCC AGAAGGTCGAAAAGGCGGCCAACACCGCCGGCGAAACGCCCCTGGAGCTGGCCGACCGGGTGGTCAAGCGCTTCCAGGGC CTCTGGGAAAAACTGGACATCCAGTATACCGACTTCATCCGCACGACCCAGGAACGGCATAAAAAAGGGGTCTCGCACAT CTTTACCAAAATCATGGCCCAAGGTGACATCTACCTGGGTGAATATGAAGACTGGTACTGCACCCCCTGCGAAACCTTCT GGACCGAAACCCAGCTCATCGACGGCAAATGCCCCGACTGCAACCGTCCGGTGGACAAACTCAAGGAAGAATCCTACTTC TTCCGGATGAGCAAATATCAGGAACAACTCCTGGCCCACATCGAGGCAAATCCCGATTTCATTCAACCCAAGAGCAGGCG CAACGAGATCATTTCCTTCGTAAAGGAAGGCCTGCGCGACCTCTCCGTCTCCCGGACCTCCTTCAACTGGGGCATTCCGG TTCCCGGAAACGAAAAACACGTCATCTACGTCTGGTTCGATGCCCTGACCAACTACATCACGGCCTTGGGCTACCCGGAC GAACAGAGCGCCTTCAAAACGTTCTGGCCGGTTGACGTCCACCTGATCGGCAAGGACATCCTCCGCTTCCATGCGGTCTA CTGGCCCACATTCCTCATGGCCGCAGGCCTGCCGGTGCCCAAAAAGGTCTTTGCCCACGGATGGTGGACCGTGGAAGGCC AGAAGATGAGCAAGAGCCTCCAGAACGTGGTGGAGCCCAACATGCTGGTGGACCGGTACGGCATTGACGCGGTCCGTTAT TTCCTGCTGCGGGAAGTCCCCTTCGGACTCGACGGCGACTTCTCCCACGCGGCCCTTGTCCACCGGATCAACTCCGACCT GGCGAACGATCTGGGCAACCTGCTCAACCGCTCCACCGCCATGGTCAACAAGTACTTCGACGGCGTTCTCCCCGCCCCCG GCCCCCAGACCGAGCTGGACACCGCCTTTAGGGAAAAGACCGAAGCCATGGTGCGCCAGCTGGATGCCTGCATGGACGAA CTGGCCTTCAGCAAGGGACTTCAGGCTATTTGGGAAGTTATCTCTGCGGGAAACAAGTACATCGACGAGACGGCACCCTG GGCCCTGGCCAAGGACCCGGCCAAACGGGAATACCTCGGCACGGTCATGTACACGCTGCTGGAAGCCCAGCGCATCGTGC ACCTGGTCCTCTCGGCCTTCATGCCGCGCACCTCCGCCAAGGCCCTCGGCTACCTGGGATGGACGGAGCCCTGCCGCGAA GAAGACCTCGCCTGGGGCAGGCTGGCGCCCGGGACGCTGATCGTCAAGGCGGAAGCGCTTTTCCCACGCATCGAGGAGAA GGAAGAAAAATAG
Upstream 100 bases:
>100_bases GCGAACGTCAAGAGCGGGAGCAGGCTCCCCCCCGCGAGGAGGGGAACAACCGGGAGCGCCGGGGCGGCAAGGGAAGAGAC CGGGATAAAAAGGAGAAGAA
Downstream 100 bases:
>100_bases GTCCCTATCTGGCCGGAATCCTCAGCTCTGCCGACGCGAAGAGGAAGAAGAACCTGAACAGGCAGTACTTGTAGAACTCA CTGAAGAGAAGCCGGAAGCT
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MSRTFYVTTPIYYVNDVPHIGHAYTTLAADVLARYKKLKGYEVFFLTGTDEHGQKVEKAANTAGETPLELADRVVKRFQG LWEKLDIQYTDFIRTTQERHKKGVSHIFTKIMAQGDIYLGEYEDWYCTPCETFWTETQLIDGKCPDCNRPVDKLKEESYF FRMSKYQEQLLAHIEANPDFIQPKSRRNEIISFVKEGLRDLSVSRTSFNWGIPVPGNEKHVIYVWFDALTNYITALGYPD EQSAFKTFWPVDVHLIGKDILRFHAVYWPTFLMAAGLPVPKKVFAHGWWTVEGQKMSKSLQNVVEPNMLVDRYGIDAVRY FLLREVPFGLDGDFSHAALVHRINSDLANDLGNLLNRSTAMVNKYFDGVLPAPGPQTELDTAFREKTEAMVRQLDACMDE LAFSKGLQAIWEVISAGNKYIDETAPWALAKDPAKREYLGTVMYTLLEAQRIVHLVLSAFMPRTSAKALGYLGWTEPCRE EDLAWGRLAPGTLIVKAEALFPRIEEKEEK
Sequences:
>Translated_510_residues MSRTFYVTTPIYYVNDVPHIGHAYTTLAADVLARYKKLKGYEVFFLTGTDEHGQKVEKAANTAGETPLELADRVVKRFQG LWEKLDIQYTDFIRTTQERHKKGVSHIFTKIMAQGDIYLGEYEDWYCTPCETFWTETQLIDGKCPDCNRPVDKLKEESYF FRMSKYQEQLLAHIEANPDFIQPKSRRNEIISFVKEGLRDLSVSRTSFNWGIPVPGNEKHVIYVWFDALTNYITALGYPD EQSAFKTFWPVDVHLIGKDILRFHAVYWPTFLMAAGLPVPKKVFAHGWWTVEGQKMSKSLQNVVEPNMLVDRYGIDAVRY FLLREVPFGLDGDFSHAALVHRINSDLANDLGNLLNRSTAMVNKYFDGVLPAPGPQTELDTAFREKTEAMVRQLDACMDE LAFSKGLQAIWEVISAGNKYIDETAPWALAKDPAKREYLGTVMYTLLEAQRIVHLVLSAFMPRTSAKALGYLGWTEPCRE EDLAWGRLAPGTLIVKAEALFPRIEEKEEK >Mature_509_residues SRTFYVTTPIYYVNDVPHIGHAYTTLAADVLARYKKLKGYEVFFLTGTDEHGQKVEKAANTAGETPLELADRVVKRFQGL WEKLDIQYTDFIRTTQERHKKGVSHIFTKIMAQGDIYLGEYEDWYCTPCETFWTETQLIDGKCPDCNRPVDKLKEESYFF RMSKYQEQLLAHIEANPDFIQPKSRRNEIISFVKEGLRDLSVSRTSFNWGIPVPGNEKHVIYVWFDALTNYITALGYPDE QSAFKTFWPVDVHLIGKDILRFHAVYWPTFLMAAGLPVPKKVFAHGWWTVEGQKMSKSLQNVVEPNMLVDRYGIDAVRYF LLREVPFGLDGDFSHAALVHRINSDLANDLGNLLNRSTAMVNKYFDGVLPAPGPQTELDTAFREKTEAMVRQLDACMDEL AFSKGLQAIWEVISAGNKYIDETAPWALAKDPAKREYLGTVMYTLLEAQRIVHLVLSAFMPRTSAKALGYLGWTEPCREE DLAWGRLAPGTLIVKAEALFPRIEEKEEK
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Homo sapiens, GI24308436, Length=549, Percent_Identity=38.9799635701275, Blast_Score=378, Evalue=1e-105, Organism=Homo sapiens, GI14043022, Length=519, Percent_Identity=27.1676300578035, Blast_Score=169, Evalue=5e-42, Organism=Escherichia coli, GI1788432, Length=552, Percent_Identity=24.6376811594203, Blast_Score=194, Evalue=1e-50, Organism=Caenorhabditis elegans, GI212645096, Length=522, Percent_Identity=34.8659003831418, Blast_Score=301, Evalue=6e-82, Organism=Caenorhabditis elegans, GI71992781, Length=416, Percent_Identity=32.2115384615385, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI17540794, Length=513, Percent_Identity=28.2651072124756, Blast_Score=176, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6321610, Length=518, Percent_Identity=34.7490347490347, Blast_Score=298, Evalue=2e-81, Organism=Saccharomyces cerevisiae, GI6321704, Length=556, Percent_Identity=26.7985611510791, Blast_Score=165, Evalue=2e-41, Organism=Drosophila melanogaster, GI21358483, Length=493, Percent_Identity=36.5111561866126, Blast_Score=318, Evalue=4e-87, Organism=Drosophila melanogaster, GI24655311, Length=555, Percent_Identity=27.027027027027, Blast_Score=170, Evalue=3e-42,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR015413 - InterPro: IPR004495 - InterPro: IPR014758 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR014729 - InterPro: IPR002547 - InterPro: IPR009080 - InterPro: IPR013155 [H]
Pfam domain/function: PF08264 Anticodon_1; PF09334 tRNA-synt_1g; PF01588 tRNA_bind [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 58389; Mature: 58258
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTFYVTTPIYYVNDVPHIGHAYTTLAADVLARYKKLKGYEVFFLTGTDEHGQKVEKAA CCCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH NTAGETPLELADRVVKRFQGLWEKLDIQYTDFIRTTQERHKKGVSHIFTKIMAQGDIYLG HCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC EYEDWYCTPCETFWTETQLIDGKCPDCNRPVDKLKEESYFFRMSKYQEQLLAHIEANPDF CCCCCEECCHHHHHCCHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC IQPKSRRNEIISFVKEGLRDLSVSRTSFNWGIPVPGNEKHVIYVWFDALTNYITALGYPD CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCC EQSAFKTFWPVDVHLIGKDILRFHAVYWPTFLMAAGLPVPKKVFAHGWWTVEGQKMSKSL CCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEECHHHHHHHH QNVVEPNMLVDRYGIDAVRYFLLREVPFGLDGDFSHAALVHRINSDLANDLGNLLNRSTA HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MVNKYFDGVLPAPGPQTELDTAFREKTEAMVRQLDACMDELAFSKGLQAIWEVISAGNKY HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH IDETAPWALAKDPAKREYLGTVMYTLLEAQRIVHLVLSAFMPRTSAKALGYLGWTEPCRE HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCH EDLAWGRLAPGTLIVKAEALFPRIEEKEEK HCCCCCCCCCCEEEEEEHHHCCCCHHCCCC >Mature Secondary Structure SRTFYVTTPIYYVNDVPHIGHAYTTLAADVLARYKKLKGYEVFFLTGTDEHGQKVEKAA CCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH NTAGETPLELADRVVKRFQGLWEKLDIQYTDFIRTTQERHKKGVSHIFTKIMAQGDIYLG HCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC EYEDWYCTPCETFWTETQLIDGKCPDCNRPVDKLKEESYFFRMSKYQEQLLAHIEANPDF CCCCCEECCHHHHHCCHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC IQPKSRRNEIISFVKEGLRDLSVSRTSFNWGIPVPGNEKHVIYVWFDALTNYITALGYPD CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCC EQSAFKTFWPVDVHLIGKDILRFHAVYWPTFLMAAGLPVPKKVFAHGWWTVEGQKMSKSL CCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEECHHHHHHHH QNVVEPNMLVDRYGIDAVRYFLLREVPFGLDGDFSHAALVHRINSDLANDLGNLLNRSTA HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MVNKYFDGVLPAPGPQTELDTAFREKTEAMVRQLDACMDELAFSKGLQAIWEVISAGNKY HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH IDETAPWALAKDPAKREYLGTVMYTLLEAQRIVHLVLSAFMPRTSAKALGYLGWTEPCRE HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCH EDLAWGRLAPGTLIVKAEALFPRIEEKEEK HCCCCCCCCCCEEEEEEHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]