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The map label for this gene is rpmB

Identifier: 39997332

GI number: 39997332

Start: 2449922

End: 2450113

Strand: Direct

Name: rpmB

Synonym: GSU2234

Alternate gene names: 39997332

Gene position: 2449922-2450113 (Clockwise)

Preceding gene: 39997330

Following gene: 39997371

Centisome position: 64.23

GC content: 56.25

Gene sequence:

>192_bases
ATGTCCAAAGTTTGCGAAATCTGCGGCAAAGGCCCCAGTTTTGGTAACAATGTCAGCCACGCTAACAACAAGACCCGCAC
CACGTGGCATCCGAACCTCCAGAAGGTGAAGGCCGTCCGTAATGGCAGCGTCAAGACCATCAAGGTCTGCACCCGCTGCA
TCCGTTCCGGCCACGTAACCAAGGCCGTCTAG

Upstream 100 bases:

>100_bases
GAGAGCCATCACACATCCTTGACGGAATATTTCACTTGCATTCGCACTTTCCGTCTGCTATAAAAGGGAGCTTCGAAAGC
CACCCGAAGGGAGTAGAATC

Downstream 100 bases:

>100_bases
ACCCTTCTTTCACCACGGCACGAAATGACTGAGCCGCAGCGCGTAAGCGCGTGCGGCTTTTTGTCGTTCCAACACCGGCA
GACCCCGCAGACAACCACCA

Product: 50S ribosomal protein L28

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MSKVCEICGKGPSFGNNVSHANNKTRTTWHPNLQKVKAVRNGSVKTIKVCTRCIRSGHVTKAV

Sequences:

>Translated_63_residues
MSKVCEICGKGPSFGNNVSHANNKTRTTWHPNLQKVKAVRNGSVKTIKVCTRCIRSGHVTKAV
>Mature_62_residues
SKVCEICGKGPSFGNNVSHANNKTRTTWHPNLQKVKAVRNGSVKTIKVCTRCIRSGHVTKAV

Specific function: Unknown

COG id: COG0227

COG function: function code J; Ribosomal protein L28

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L28P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL28_GEOSL (Q74AW5)

Other databases:

- EMBL:   AE017180
- RefSeq:   NP_953283.1
- ProteinModelPortal:   Q74AW5
- SMR:   Q74AW5
- GeneID:   2687534
- GenomeReviews:   AE017180_GR
- KEGG:   gsu:GSU2234
- NMPDR:   fig|243231.1.peg.2221
- TIGR:   GSU2234
- HOGENOM:   HBG597003
- OMA:   NACTSCI
- ProtClustDB:   PRK00359
- BioCyc:   GSUL243231:GSU_2234-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00373
- InterPro:   IPR001383
- TIGRFAMs:   TIGR00009

Pfam domain/function: PF00830 Ribosomal_L28

EC number: NA

Molecular weight: Translated: 6879; Mature: 6748

Theoretical pI: Translated: 11.22; Mature: 11.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVCEICGKGPSFGNNVSHANNKTRTTWHPNLQKVKAVRNGSVKTIKVCTRCIRSGHVT
CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCC
KAV
CCC
>Mature Secondary Structure 
SKVCEICGKGPSFGNNVSHANNKTRTTWHPNLQKVKAVRNGSVKTIKVCTRCIRSGHVT
CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCC
KAV
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA