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The map label for this gene is napF [C]

Identifier: 39995466

GI number: 39995466

Start: 388985

End: 389410

Strand: Reverse

Name: napF [C]

Synonym: GSU0358

Alternate gene names: 39995466

Gene position: 389410-388985 (Counterclockwise)

Preceding gene: 39995467

Following gene: 39995465

Centisome position: 10.21

GC content: 61.27

Gene sequence:

>426_bases
GTGTGCCGACCGCCGCGATTCAAGGAAACCGCATCTGGCTCCTGCGGCGATTGCACCGCCTGCCGGGATGCCTGTCCCTC
AGCAATTATCGTGCGTGACTTTGCCCGAAAGGGACCGCACCTCGACTTTTTCCAGGGGCGCTGCACCTTTTGCTACCTCT
GCGCCGGGGCTTGCCCCAAGGGCATTCTGACACTGCCAAACGAAGGGGAACGCATGGTGATCGGCAGAGCCCGGTTAATC
CGTGACCGCTGCCTGGTTCGCGAAGGGTGTTCCGTCTGCATTGAGCGCTGTCCCGAGGGAGCGCTCACCCTCATCTTCGG
CAGAACCATCCGGGTGAGCAAACGAAAATGTACCGGTTGCGGCGGCTGCAGACATGTCTGCCCGGCAAAGCCGAACGCGA
TGAGTATTGAGCCGTTGAACGGCTAG

Upstream 100 bases:

>100_bases
ACAGATAAGCAAAGGCGGGGCAATGGCAGGACGCTGGTTTCTGTTCCGATTCTTGTCCGGTTATTGGAGTGCGGCGCGGA
ACATCGGCGCGGCTACCCCC

Downstream 100 bases:

>100_bases
CCGTAACCTATCACGAAAGGAGAAATCAACGTATGTGGAAGAAACGACTGGCTGTACTGGCGGTGGCCGCGGGAGCGGCA
GTTGCCCTGTCGATCCCGGC

Product: iron-sulfur cluster-binding protein

Products: reduced acceptor; NO3- [C]

Alternate protein names: Ferredoxin-Type Protein

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MCRPPRFKETASGSCGDCTACRDACPSAIIVRDFARKGPHLDFFQGRCTFCYLCAGACPKGILTLPNEGERMVIGRARLI
RDRCLVREGCSVCIERCPEGALTLIFGRTIRVSKRKCTGCGGCRHVCPAKPNAMSIEPLNG

Sequences:

>Translated_141_residues
MCRPPRFKETASGSCGDCTACRDACPSAIIVRDFARKGPHLDFFQGRCTFCYLCAGACPKGILTLPNEGERMVIGRARLI
RDRCLVREGCSVCIERCPEGALTLIFGRTIRVSKRKCTGCGGCRHVCPAKPNAMSIEPLNG
>Mature_141_residues
MCRPPRFKETASGSCGDCTACRDACPSAIIVRDFARKGPHLDFFQGRCTFCYLCAGACPKGILTLPNEGERMVIGRARLI
RDRCLVREGCSVCIERCPEGALTLIFGRTIRVSKRKCTGCGGCRHVCPAKPNAMSIEPLNG

Specific function: Involved In Electron Transfer. [C]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15330; Mature: 15330

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

12.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
14.2 %Cys+Met (Translated Protein)
12.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
14.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRPPRFKETASGSCGDCTACRDACPSAIIVRDFARKGPHLDFFQGRCTFCYLCAGACPK
CCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCC
GILTLPNEGERMVIGRARLIRDRCLVREGCSVCIERCPEGALTLIFGRTIRVSKRKCTGC
CEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCCCC
GGCRHVCPAKPNAMSIEPLNG
CCCCCCCCCCCCCEEECCCCC
>Mature Secondary Structure
MCRPPRFKETASGSCGDCTACRDACPSAIIVRDFARKGPHLDFFQGRCTFCYLCAGACPK
CCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCC
GILTLPNEGERMVIGRARLIRDRCLVREGCSVCIERCPEGALTLIFGRTIRVSKRKCTGC
CEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCCCC
GGCRHVCPAKPNAMSIEPLNG
CCCCCCCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA