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The map label for this gene is dksA [H]

Identifier: 39995393

GI number: 39995393

Start: 313467

End: 313823

Strand: Reverse

Name: dksA [H]

Synonym: GSU0284

Alternate gene names: 39995393

Gene position: 313823-313467 (Counterclockwise)

Preceding gene: 39995394

Following gene: 39995392

Centisome position: 8.23

GC content: 57.98

Gene sequence:

>357_bases
ATGGAAAGCGAGAAGCTTGAATACTTCAGAACCATACTCAACGAAGAGATGCGGACCCTCCTCGATGAGGCAGGCAAGAC
CGTCTCCGAGATGACTTCAGACAGCACGCCGTTTCCCGACCCCAACGACCGGGCCACCCAGGAGTCGGACCGCAACTTCG
AGCTGCGAATCAGAGACCGGGAGCGCAAACTCATCAACAAAATCAGAGAGGCCCTCGAGCGCATCGACGACGGCACCTTC
GGGACCTGCGAAGTGTGCGGCGAGGAAATCGGCGAGGGACGCCTCAAGGCACGCCCCGTCACCACCCTCTGCATCGACTG
CAAGATGGAGCAGGAAAGAAAAGAAAAACATCCCTGA

Upstream 100 bases:

>100_bases
GGAACAGCTCTTCTGACTGATCCGACGCGCTTTTTTCCTTTACTTGATTAGCCGTTTCTCTTACTATTTACAGCAGTTAT
ACATAAAGGAGATTCGGTGA

Downstream 100 bases:

>100_bases
CCACTTCTCCCCCTCGCCCCCTTCCCGCGGAGTCTTGGATGGCTGTTCACGATCCCTACACCATACTGAGCAGCGCCATT
CGGATCGCCAACGCGACCGA

Product: dnaK suppressor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MESEKLEYFRTILNEEMRTLLDEAGKTVSEMTSDSTPFPDPNDRATQESDRNFELRIRDRERKLINKIREALERIDDGTF
GTCEVCGEEIGEGRLKARPVTTLCIDCKMEQERKEKHP

Sequences:

>Translated_118_residues
MESEKLEYFRTILNEEMRTLLDEAGKTVSEMTSDSTPFPDPNDRATQESDRNFELRIRDRERKLINKIREALERIDDGTF
GTCEVCGEEIGEGRLKARPVTTLCIDCKMEQERKEKHP
>Mature_118_residues
MESEKLEYFRTILNEEMRTLLDEAGKTVSEMTSDSTPFPDPNDRATQESDRNFELRIRDRERKLINKIREALERIDDGTF
GTCEVCGEEIGEGRLKARPVTTLCIDCKMEQERKEKHP

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1786338, Length=117, Percent_Identity=50.4273504273504, Blast_Score=113, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 13769; Mature: 13769

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESEKLEYFRTILNEEMRTLLDEAGKTVSEMTSDSTPFPDPNDRATQESDRNFELRIRDR
CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECHH
ERKLINKIREALERIDDGTFGTCEVCGEEIGEGRLKARPVTTLCIDCKMEQERKEKHP
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHEECCCCHHHHHCCCC
>Mature Secondary Structure
MESEKLEYFRTILNEEMRTLLDEAGKTVSEMTSDSTPFPDPNDRATQESDRNFELRIRDR
CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECHH
ERKLINKIREALERIDDGTFGTCEVCGEEIGEGRLKARPVTTLCIDCKMEQERKEKHP
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHEECCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 8063112 [H]