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The map label for this gene is ybaL [H]

Identifier: 39995371

GI number: 39995371

Start: 268106

End: 269872

Strand: Reverse

Name: ybaL [H]

Synonym: GSU0261

Alternate gene names: 39995371

Gene position: 269872-268106 (Counterclockwise)

Preceding gene: 39995374

Following gene: 39995370

Centisome position: 7.08

GC content: 64.18

Gene sequence:

>1767_bases
ATGCACGATCTTGGACTCATCATGACCATCACGGGGAGCTTCACCGCGGCGCTGCTCCTGGGGTATCTGACCCATCGCCT
GGGCATGTCGTCGATTGTCGGATATCTTCTGGCGGGCATTGCCGTCGGAACCCACACGCCGGGGTTCGTCGCCGACCTGG
GGATGGCTGAACAATTCGCCGAAATCGGCGTCATCCTTCTGATGTTCGGCGTGGGGCTCCAGTTTCACGTCAAAGAACTG
CTCGACGTGCGGCGTGTGGCCATTCCCGGCGCTGTATGCCAGAGCGCCGTGGCCACACTGCTGAGTTGCCTGCTGGCCAG
GTGGCTCGGCTGGAGTTGGTCGGCGGGTATCGTCTTCGGCTTCGCCGTGTCGGTTGCGAGCACGGTCGTGCTTCTCCGCG
TGCTGGTGGACAACAATGAGCTGCATACCCCCACCGGCCACATTGCCGTGGGCTGGCTCGTGGTGGAAGACATCTTCACC
GTTTTCCTGCTGGTGATCCTGCCCATCTTTTTCGGCTCCGGGGTGGCCGGATCGGACAGCCTCCCCCTCGCCATCGGGCT
CTCCGTGGTCAAGATAGCCCTCCTCGTCGCCCTGACCTTCTTCGTCGGAAGCCGCCTCATCCCCCGCCTCCTGTGGCACG
TGGCGGCCACGCGCTCACGGGAGCTGTTCACCTTGACCGTGCTGGTGCTCGCCCTGGGGATTGCCGTGGGCTCCGCCAAA
CTCTTCGGCGTGTCCATGGCGCTCGGGGCATTTCTGGCAGGCATGGTGGTCCGGCAGTCCGATTTCAGCTTTCGGGCCGC
ATCGGAAGCGCTGCCGATGCGAGATGCCTTCGCGGTCCTCTTTTTCGTCTCGGTGGGGATGCTCTTCAACCCGACATACC
TGATGGAGGAACCCGGCCTCGTACTTGCCACCCTCGTGATCATCCTGGTGGGCAAGCCGCTGGCCGCGCTGGTGATCGTT
CTCGTCCTCGGCTATGCGCCGCGCGTTGCGCTGTCCATTGCCGTCGCCCTGGCGCAGATCGGGGAATTCTCGTTCATCCT
GGCCACCGTCGGCAAAGACCTGGGCGTCCTCGGCGAAGGGGGAGCCAACACCCTCGTTGCCGCATCGATCATATCAATCA
GCCTCAACCCACTGCTGTACCGGCTCATCGGGCCGTTGGAGAAAAAAGCCCGACATTGGCGCCTCTGGCGCATGCTCGAC
GAACGGGCGAAGTCGCGCACCACAGGGAGTGCCGAAGACGCGGGCAGCCATGTGCTCACGTCCCGGAACAGGGCAATCGT
GGTGGGATACGGCCCCACGGGCAGAACCCTGGCCCGTCTGCTCAGTGAAAACGGGATTGACCCGGTCATTATCGAGATGA
ACCTGCACACGGTCCGCCAGCTCAACGCCGACGGCACATTGGCCATTTACGGGGATGCCACGCGCGAGGAAACACTGAAG
GGGGCGGGGGTGGAGAGTGCTGTTGCCTTCATCCTGACCTCGGCAGGGATGCAGGGAAGCGACGAGGCCATCCGCCTGGC
TCGGGAACTCAACCCCAACCTGCGCATCATCGCCCGCGCGGCCTATCTGAGGGATATTCCGGCCCTGCGCCGCGCCGGGG
CCGATGCGGTGTTCTCGGGAGAGGGCGAGATAGCGCTCAACATGACCGAGCACATGCTCAACAAACTCGGCGCCACGCCC
GAGCAGATCGACCGCGAACGGGAGCGGGTCCGGTCGGAGCTCCTCGGAGGGACGCCGGCCGTAACACCGCTCGCCACGGA
TCACTAA

Upstream 100 bases:

>100_bases
GGGCACGGCAGACGTAACGCATCGAATTAGGCCGGCACGACCGGCTTCGGCCCCACATGCCGCCGGCAGACGGTCCGCCG
GGAGGAGGAATTAAGAACAT

Downstream 100 bases:

>100_bases
CGCCGGAACCAGCCCCGCACATTACACAGATGTCCCGGCACTATGACTGGAGGGAACGGAATGAGAATTCTTCTTGCAGT
AGATGGTTCACCGGGCAGCG

Product: sodium/hydrogen exchanger

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 588

Protein sequence:

>588_residues
MHDLGLIMTITGSFTAALLLGYLTHRLGMSSIVGYLLAGIAVGTHTPGFVADLGMAEQFAEIGVILLMFGVGLQFHVKEL
LDVRRVAIPGAVCQSAVATLLSCLLARWLGWSWSAGIVFGFAVSVASTVVLLRVLVDNNELHTPTGHIAVGWLVVEDIFT
VFLLVILPIFFGSGVAGSDSLPLAIGLSVVKIALLVALTFFVGSRLIPRLLWHVAATRSRELFTLTVLVLALGIAVGSAK
LFGVSMALGAFLAGMVVRQSDFSFRAASEALPMRDAFAVLFFVSVGMLFNPTYLMEEPGLVLATLVIILVGKPLAALVIV
LVLGYAPRVALSIAVALAQIGEFSFILATVGKDLGVLGEGGANTLVAASIISISLNPLLYRLIGPLEKKARHWRLWRMLD
ERAKSRTTGSAEDAGSHVLTSRNRAIVVGYGPTGRTLARLLSENGIDPVIIEMNLHTVRQLNADGTLAIYGDATREETLK
GAGVESAVAFILTSAGMQGSDEAIRLARELNPNLRIIARAAYLRDIPALRRAGADAVFSGEGEIALNMTEHMLNKLGATP
EQIDRERERVRSELLGGTPAVTPLATDH

Sequences:

>Translated_588_residues
MHDLGLIMTITGSFTAALLLGYLTHRLGMSSIVGYLLAGIAVGTHTPGFVADLGMAEQFAEIGVILLMFGVGLQFHVKEL
LDVRRVAIPGAVCQSAVATLLSCLLARWLGWSWSAGIVFGFAVSVASTVVLLRVLVDNNELHTPTGHIAVGWLVVEDIFT
VFLLVILPIFFGSGVAGSDSLPLAIGLSVVKIALLVALTFFVGSRLIPRLLWHVAATRSRELFTLTVLVLALGIAVGSAK
LFGVSMALGAFLAGMVVRQSDFSFRAASEALPMRDAFAVLFFVSVGMLFNPTYLMEEPGLVLATLVIILVGKPLAALVIV
LVLGYAPRVALSIAVALAQIGEFSFILATVGKDLGVLGEGGANTLVAASIISISLNPLLYRLIGPLEKKARHWRLWRMLD
ERAKSRTTGSAEDAGSHVLTSRNRAIVVGYGPTGRTLARLLSENGIDPVIIEMNLHTVRQLNADGTLAIYGDATREETLK
GAGVESAVAFILTSAGMQGSDEAIRLARELNPNLRIIARAAYLRDIPALRRAGADAVFSGEGEIALNMTEHMLNKLGATP
EQIDRERERVRSELLGGTPAVTPLATDH
>Mature_588_residues
MHDLGLIMTITGSFTAALLLGYLTHRLGMSSIVGYLLAGIAVGTHTPGFVADLGMAEQFAEIGVILLMFGVGLQFHVKEL
LDVRRVAIPGAVCQSAVATLLSCLLARWLGWSWSAGIVFGFAVSVASTVVLLRVLVDNNELHTPTGHIAVGWLVVEDIFT
VFLLVILPIFFGSGVAGSDSLPLAIGLSVVKIALLVALTFFVGSRLIPRLLWHVAATRSRELFTLTVLVLALGIAVGSAK
LFGVSMALGAFLAGMVVRQSDFSFRAASEALPMRDAFAVLFFVSVGMLFNPTYLMEEPGLVLATLVIILVGKPLAALVIV
LVLGYAPRVALSIAVALAQIGEFSFILATVGKDLGVLGEGGANTLVAASIISISLNPLLYRLIGPLEKKARHWRLWRMLD
ERAKSRTTGSAEDAGSHVLTSRNRAIVVGYGPTGRTLARLLSENGIDPVIIEMNLHTVRQLNADGTLAIYGDATREETLK
GAGVESAVAFILTSAGMQGSDEAIRLARELNPNLRIIARAAYLRDIPALRRAGADAVFSGEGEIALNMTEHMLNKLGATP
EQIDRERERVRSELLGGTPAVTPLATDH

Specific function: Unknown

COG id: COG4651

COG function: function code P; Kef-type K+ transport system, predicted NAD-binding component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI157388921, Length=385, Percent_Identity=24.6753246753247, Blast_Score=100, Evalue=5e-21,
Organism=Escherichia coli, GI1786685, Length=552, Percent_Identity=46.9202898550725, Blast_Score=417, Evalue=1e-117,
Organism=Escherichia coli, GI1789749, Length=567, Percent_Identity=26.8077601410935, Blast_Score=178, Evalue=1e-45,
Organism=Escherichia coli, GI1786232, Length=545, Percent_Identity=28.0733944954128, Blast_Score=173, Evalue=3e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006153
- InterPro:   IPR004771
- InterPro:   IPR016040
- InterPro:   IPR003148 [H]

Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 62537; Mature: 62537

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDLGLIMTITGSFTAALLLGYLTHRLGMSSIVGYLLAGIAVGTHTPGFVADLGMAEQFA
CCCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
EIGVILLMFGVGLQFHVKELLDVRRVAIPGAVCQSAVATLLSCLLARWLGWSWSAGIVFG
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
FAVSVASTVVLLRVLVDNNELHTPTGHIAVGWLVVEDIFTVFLLVILPIFFGSGVAGSDS
HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LPLAIGLSVVKIALLVALTFFVGSRLIPRLLWHVAATRSRELFTLTVLVLALGIAVGSAK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHH
LFGVSMALGAFLAGMVVRQSDFSFRAASEALPMRDAFAVLFFVSVGMLFNPTYLMEEPGL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEECCCCH
VLATLVIILVGKPLAALVIVLVLGYAPRVALSIAVALAQIGEFSFILATVGKDLGVLGEG
HHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCC
GANTLVAASIISISLNPLLYRLIGPLEKKARHWRLWRMLDERAKSRTTGSAEDAGSHVLT
CCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHEE
SRNRAIVVGYGPTGRTLARLLSENGIDPVIIEMNLHTVRQLNADGTLAIYGDATREETLK
CCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECHHHHHHCCCCCCEEEECCCCHHHHHH
GAGVESAVAFILTSAGMQGSDEAIRLARELNPNLRIIARAAYLRDIPALRRAGADAVFSG
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHCHHHHHCCCCCEECC
EGEIALNMTEHMLNKLGATPEQIDRERERVRSELLGGTPAVTPLATDH
CCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MHDLGLIMTITGSFTAALLLGYLTHRLGMSSIVGYLLAGIAVGTHTPGFVADLGMAEQFA
CCCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
EIGVILLMFGVGLQFHVKELLDVRRVAIPGAVCQSAVATLLSCLLARWLGWSWSAGIVFG
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
FAVSVASTVVLLRVLVDNNELHTPTGHIAVGWLVVEDIFTVFLLVILPIFFGSGVAGSDS
HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LPLAIGLSVVKIALLVALTFFVGSRLIPRLLWHVAATRSRELFTLTVLVLALGIAVGSAK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHH
LFGVSMALGAFLAGMVVRQSDFSFRAASEALPMRDAFAVLFFVSVGMLFNPTYLMEEPGL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEECCCCH
VLATLVIILVGKPLAALVIVLVLGYAPRVALSIAVALAQIGEFSFILATVGKDLGVLGEG
HHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCC
GANTLVAASIISISLNPLLYRLIGPLEKKARHWRLWRMLDERAKSRTTGSAEDAGSHVLT
CCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHEE
SRNRAIVVGYGPTGRTLARLLSENGIDPVIIEMNLHTVRQLNADGTLAIYGDATREETLK
CCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECHHHHHHCCCCCCEEEECCCCHHHHHH
GAGVESAVAFILTSAGMQGSDEAIRLARELNPNLRIIARAAYLRDIPALRRAGADAVFSG
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHCHHHHHCCCCCEECC
EGEIALNMTEHMLNKLGATPEQIDRERERVRSELLGGTPAVTPLATDH
CCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503; 7721718 [H]