| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995370
Identifier: 39995370
GI number: 39995370
Start: 267578
End: 268045
Strand: Reverse
Name: 39995370
Synonym: GSU0260
Alternate gene names: NA
Gene position: 268045-267578 (Counterclockwise)
Preceding gene: 39995371
Following gene: 39995369
Centisome position: 7.03
GC content: 63.68
Gene sequence:
>468_bases ATGAGAATTCTTCTTGCAGTAGATGGTTCACCGGGCAGCGACGCTGCCGTTGCAGAGGTATGCCGCAGGCCCTGGCCGGC CGCAAGCGAAGTCCGCATCGTGACCGTGCTTTCCCCGCTGGAATCGCTCCCCTTGCGCAACTCTTCACACATCCCCCTGT CCTATGACGAGATCTTCGAGCAACAGGGGTGGGATGCGGCCAAACGCTTGAAGGACGCGGCCGAAACCCTGCAGCAACGG GCACCCGACCTGCACGTCACGCCCGTGCTGCTGGAAGGCCGGCCCAAGAATGCCATTCTGGACGAAGCCGAACGATGGTG TGCGGACCTGATCGTTGTCGGCTCCCAAGGATCCGGGGCGCTCAAGCGCTTTTTCCTCGGCTCCGTATCCCTGGCCGTTG CCCTTCACGCGCCCTGCTCCGTGGAGATCATACGCCGCTCGCCCGATCAGCCGGACCCAGCGGCCTGA
Upstream 100 bases:
>100_bases AGGGACGCCGGCCGTAACACCGCTCGCCACGGATCACTAACGCCGGAACCAGCCCCGCACATTACACAGATGTCCCGGCA CTATGACTGGAGGGAACGGA
Downstream 100 bases:
>100_bases ACGGTCGAGCGCCGGAGGGAACCGGTCTTGTCGCTCCCGGAGCAACGACTCTCCCCTGAGTAACCAGAGCGGTTTCGGTC CGGATAAAAAGTATTCCTTG
Product: universal stress protein
Products: NA
Alternate protein names: Universal Stress Protein Family Protein
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MRILLAVDGSPGSDAAVAEVCRRPWPAASEVRIVTVLSPLESLPLRNSSHIPLSYDEIFEQQGWDAAKRLKDAAETLQQR APDLHVTPVLLEGRPKNAILDEAERWCADLIVVGSQGSGALKRFFLGSVSLAVALHAPCSVEIIRRSPDQPDPAA
Sequences:
>Translated_155_residues MRILLAVDGSPGSDAAVAEVCRRPWPAASEVRIVTVLSPLESLPLRNSSHIPLSYDEIFEQQGWDAAKRLKDAAETLQQR APDLHVTPVLLEGRPKNAILDEAERWCADLIVVGSQGSGALKRFFLGSVSLAVALHAPCSVEIIRRSPDQPDPAA >Mature_155_residues MRILLAVDGSPGSDAAVAEVCRRPWPAASEVRIVTVLSPLESLPLRNSSHIPLSYDEIFEQQGWDAAKRLKDAAETLQQR APDLHVTPVLLEGRPKNAILDEAERWCADLIVVGSQGSGALKRFFLGSVSLAVALHAPCSVEIIRRSPDQPDPAA
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16753; Mature: 16753
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILLAVDGSPGSDAAVAEVCRRPWPAASEVRIVTVLSPLESLPLRNSSHIPLSYDEIFE CEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCHHHCCCCCCCCCCCCHHHHHH QQGWDAAKRLKDAAETLQQRAPDLHVTPVLLEGRPKNAILDEAERWCADLIVVGSQGSGA HCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHEEEECCCCCHH LKRFFLGSVSLAVALHAPCSVEIIRRSPDQPDPAA HHHHHHHHHHEEEEECCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MRILLAVDGSPGSDAAVAEVCRRPWPAASEVRIVTVLSPLESLPLRNSSHIPLSYDEIFE CEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCHHHCCCCCCCCCCCCHHHHHH QQGWDAAKRLKDAAETLQQRAPDLHVTPVLLEGRPKNAILDEAERWCADLIVVGSQGSGA HCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHEEEECCCCCHH LKRFFLGSVSLAVALHAPCSVEIIRRSPDQPDPAA HHHHHHHHHHEEEEECCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA