Click here to switch to the map view.

The map label for this gene is yvbT [H]

Identifier: 38234309

GI number: 38234309

Start: 1780859

End: 1781812

Strand: Direct

Name: yvbT [H]

Synonym: DIP1738

Alternate gene names: 38234309

Gene position: 1780859-1781812 (Clockwise)

Preceding gene: 38234308

Following gene: 38234311

Centisome position: 71.56

GC content: 56.71

Gene sequence:

>954_bases
ATGAAGCTGTCGCTCATCGACTTCGCCACAATCTACCACGGCGAGCGCCCACGCGACAGCTTCCAACGCTCCGTCGCCCT
CGCACAGCAAGCTGAGGCGACGGGTTTTTCGCGTGTGTGGTACGCCGAGCATCACAACATGCCTACGATTTCTTCCTCCG
CCCCCGCAGTGCTCATCTCGCACGTGGGGGCTCACACATCTACGATCCGACTCGGCGCAGGCGGCGTCATGCTCCCCAAC
CACTCCCCCTACACCATCGCTGAGCAATTCGGCACGCTCGCAGAGCTCTACCCAGGCCGCATCGATCTTGGCTTAGGTCG
CGCGCCTGGCACGGATCACACCACCCTAGCCCAAGCGTTACGACGCTCCCCGCACGCCGCACAATCTTTCCCCGAAGACG
TAGTTGAGCTGTATCAGTACCTCAACGGCACATCCAGCATTGCTGCGATCCCCGGCGCGGGAACAAACGTCCCACTCTAT
ATTTTGGGCTCCTCACTCTTCGGTGCTCATCTGGCAGCAAAACTTGGTCTACCTTTTGGTTTTGCTTCCCACTTCGCACC
GACGCACCTTGATGCGGCAATTCGCACATACCGCGACAATTTTGTGCCCTCCCAAGAGTTGGATGCACCCTATGTTATTG
CGGCCGTCAACGTCGTTGCAGCAGACACGTTATCGCAGGCACACGAACAGTTGGAGGAAGTGAAACGGCATCGTCTTCGG
GCGGGGAGAAATCTCAGCGACGACCAACTCCACATTTTGATGAATACCGTCGCAGGCCAGCGCATTGACCAGATGTTGAA
ATACACCGCAATAGGAAATGGTGAGGTAGTACGTGACTACCTCACCAAGTTTCAGCGCCATTGTGGGGCTGATGAGCTCA
TGGTGTCTTTGTTATCCACTTCGTGGGAGGACACCATGCGGGCTGTGGAAATTACCAGTCTTCTTGTGTCTTAG

Upstream 100 bases:

>100_bases
CCATGACATCAGCCTCTCGTGGATCTGGCCCGCTTTGATCGGCTTCGTTCTCGGTCTGAGCATTGATAAGGCCCTCGCTT
ACAAGAGTTAGGATCCTCCC

Downstream 100 bases:

>100_bases
GTCGTGTTTGTTCCACGATCTTAAAACCTGGTTCTTCTTCCTCTTCCACCATGTCGCCAACCACACCTAGGTCGCCTTCG
ATAACTACGTTGCCAGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MKLSLIDFATIYHGERPRDSFQRSVALAQQAEATGFSRVWYAEHHNMPTISSSAPAVLISHVGAHTSTIRLGAGGVMLPN
HSPYTIAEQFGTLAELYPGRIDLGLGRAPGTDHTTLAQALRRSPHAAQSFPEDVVELYQYLNGTSSIAAIPGAGTNVPLY
ILGSSLFGAHLAAKLGLPFGFASHFAPTHLDAAIRTYRDNFVPSQELDAPYVIAAVNVVAADTLSQAHEQLEEVKRHRLR
AGRNLSDDQLHILMNTVAGQRIDQMLKYTAIGNGEVVRDYLTKFQRHCGADELMVSLLSTSWEDTMRAVEITSLLVS

Sequences:

>Translated_317_residues
MKLSLIDFATIYHGERPRDSFQRSVALAQQAEATGFSRVWYAEHHNMPTISSSAPAVLISHVGAHTSTIRLGAGGVMLPN
HSPYTIAEQFGTLAELYPGRIDLGLGRAPGTDHTTLAQALRRSPHAAQSFPEDVVELYQYLNGTSSIAAIPGAGTNVPLY
ILGSSLFGAHLAAKLGLPFGFASHFAPTHLDAAIRTYRDNFVPSQELDAPYVIAAVNVVAADTLSQAHEQLEEVKRHRLR
AGRNLSDDQLHILMNTVAGQRIDQMLKYTAIGNGEVVRDYLTKFQRHCGADELMVSLLSTSWEDTMRAVEITSLLVS
>Mature_317_residues
MKLSLIDFATIYHGERPRDSFQRSVALAQQAEATGFSRVWYAEHHNMPTISSSAPAVLISHVGAHTSTIRLGAGGVMLPN
HSPYTIAEQFGTLAELYPGRIDLGLGRAPGTDHTTLAQALRRSPHAAQSFPEDVVELYQYLNGTSSIAAIPGAGTNVPLY
ILGSSLFGAHLAAKLGLPFGFASHFAPTHLDAAIRTYRDNFVPSQELDAPYVIAAVNVVAADTLSQAHEQLEEVKRHRLR
AGRNLSDDQLHILMNTVAGQRIDQMLKYTAIGNGEVVRDYLTKFQRHCGADELMVSLLSTSWEDTMRAVEITSLLVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]

Homologues:

Organism=Escherichia coli, GI1789551, Length=305, Percent_Identity=43.9344262295082, Blast_Score=243, Evalue=1e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 34499; Mature: 34499

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSLIDFATIYHGERPRDSFQRSVALAQQAEATGFSRVWYAEHHNMPTISSSAPAVLIS
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHCCCCCCCCCCCCHHHHH
HVGAHTSTIRLGAGGVMLPNHSPYTIAEQFGTLAELYPGRIDLGLGRAPGTDHTTLAQAL
HCCCCCCEEEECCCCEECCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHH
RRSPHAAQSFPEDVVELYQYLNGTSSIAAIPGAGTNVPLYILGSSLFGAHLAAKLGLPFG
HCCCCHHHCCCHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCHHHHHHHHHHHCCCCC
FASHFAPTHLDAAIRTYRDNFVPSQELDAPYVIAAVNVVAADTLSQAHEQLEEVKRHRLR
HHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGRNLSDDQLHILMNTVAGQRIDQMLKYTAIGNGEVVRDYLTKFQRHCGADELMVSLLST
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHC
SWEDTMRAVEITSLLVS
CHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLSLIDFATIYHGERPRDSFQRSVALAQQAEATGFSRVWYAEHHNMPTISSSAPAVLIS
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHCCCCCCCCCCCCHHHHH
HVGAHTSTIRLGAGGVMLPNHSPYTIAEQFGTLAELYPGRIDLGLGRAPGTDHTTLAQAL
HCCCCCCEEEECCCCEECCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHH
RRSPHAAQSFPEDVVELYQYLNGTSSIAAIPGAGTNVPLYILGSSLFGAHLAAKLGLPFG
HCCCCHHHCCCHHHHHHHHHHCCCCCEEECCCCCCCCEEEEECCHHHHHHHHHHHCCCCC
FASHFAPTHLDAAIRTYRDNFVPSQELDAPYVIAAVNVVAADTLSQAHEQLEEVKRHRLR
HHHHCCHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGRNLSDDQLHILMNTVAGQRIDQMLKYTAIGNGEVVRDYLTKFQRHCGADELMVSLLST
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHC
SWEDTMRAVEITSLLVS
CHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]