| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234160
Identifier: 38234160
GI number: 38234160
Start: 1612953
End: 1613918
Strand: Direct
Name: 38234160
Synonym: DIP1585
Alternate gene names: NA
Gene position: 1612953-1613918 (Clockwise)
Preceding gene: 38234156
Following gene: 38234162
Centisome position: 64.81
GC content: 52.9
Gene sequence:
>966_bases ATGACGCTGGTGCGCCTACAAAAACGATCAATTTCCCGCAATCGTCATCACACCAGAATCGGTCTCTGCTGCATCACCGT TGCCGCGCTAAGCCTAAGCGCCTGCAGCTCTGAGAATTCCTCCTCGAAGGAGACTCGCCCCAAAATAGAACAAGCAATCG GCGCACAAGTAGACACTCCACGAGTCACACTTATCGACCAGGGAAACTCACCCCAACAATTGGTGACCTATCGTGACGAC GGCACCCAAACAACCCGACGGATTAAAATTTCGGACGGATTAACACACCACACTGAAAGCGCTGCACAACTCGATACCAC AGCGCCACATGGCGGCGATGTTACATCCTTAACCACCGATGCCACGGTGTCGACTACCCGTAAAGATTCCCAGCGTTCAG TTACCGCGATCATTGATCACCCCACCATTGACGACCTCGAGCACTCTAGAGATATCGATTCCACACATGGATTCCAACTC GGCTGGTTTGGCGCAGATAATGGGCGCATCAGCTCCGTGAATCTCGCTGCCCCTGTTGATGCCAGCGACGATGGCCGCGC CCTCATGGAACGCTTTCTCATGAAGATGGTCAACATCCCCATAATCTTCCCCGAAGAACCAATTGGCCCTTCAGCCCGTT GGACCGTTGACTCACGTGTGACAGGCGAAGCAACAATGCTGCAGACCACTACGTTTACGCTCACATCGATCAAAGGCAAC AACGTTGAGTTGGATGTCTCCATCACCCAACGGCCAGCATTAGGCGCCATTGAAGCCCAAGGCACCACCTTGCACGTGCT CAATGCGAACACCACCAGTAACGGCAACCTCCGAGTTGATCTGTCACAGCCGTTACCGACTGAAGGTACGCTTCGCTATA CCACCCGAGTGATTTATGGTGAGCGTGAAAAAGATGTTCGCGTAGTACAAGACTCGACCACTTCCATCGAGTTTTCAACC CCATAA
Upstream 100 bases:
>100_bases GACGTCGTGCCTCTGGATTACTCCTGTCCGTTAGACTCACGCCTTATATCTTGGCAAAAATCCACCTCAAACTAACAACC GACAGGCTAACCCCGCTAAA
Downstream 100 bases:
>100_bases AACAACAAGATCGGGGCTTCTTATTGCTGCTCTCTTTCTAGAAGAGAAAGCTCATATAGAAGCCCAGGATTGTTGTTTCT ACTCATTTTTACTGAGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MTLVRLQKRSISRNRHHTRIGLCCITVAALSLSACSSENSSSKETRPKIEQAIGAQVDTPRVTLIDQGNSPQQLVTYRDD GTQTTRRIKISDGLTHHTESAAQLDTTAPHGGDVTSLTTDATVSTTRKDSQRSVTAIIDHPTIDDLEHSRDIDSTHGFQL GWFGADNGRISSVNLAAPVDASDDGRALMERFLMKMVNIPIIFPEEPIGPSARWTVDSRVTGEATMLQTTTFTLTSIKGN NVELDVSITQRPALGAIEAQGTTLHVLNANTTSNGNLRVDLSQPLPTEGTLRYTTRVIYGEREKDVRVVQDSTTSIEFST P
Sequences:
>Translated_321_residues MTLVRLQKRSISRNRHHTRIGLCCITVAALSLSACSSENSSSKETRPKIEQAIGAQVDTPRVTLIDQGNSPQQLVTYRDD GTQTTRRIKISDGLTHHTESAAQLDTTAPHGGDVTSLTTDATVSTTRKDSQRSVTAIIDHPTIDDLEHSRDIDSTHGFQL GWFGADNGRISSVNLAAPVDASDDGRALMERFLMKMVNIPIIFPEEPIGPSARWTVDSRVTGEATMLQTTTFTLTSIKGN NVELDVSITQRPALGAIEAQGTTLHVLNANTTSNGNLRVDLSQPLPTEGTLRYTTRVIYGEREKDVRVVQDSTTSIEFST P >Mature_320_residues TLVRLQKRSISRNRHHTRIGLCCITVAALSLSACSSENSSSKETRPKIEQAIGAQVDTPRVTLIDQGNSPQQLVTYRDDG TQTTRRIKISDGLTHHTESAAQLDTTAPHGGDVTSLTTDATVSTTRKDSQRSVTAIIDHPTIDDLEHSRDIDSTHGFQLG WFGADNGRISSVNLAAPVDASDDGRALMERFLMKMVNIPIIFPEEPIGPSARWTVDSRVTGEATMLQTTTFTLTSIKGNN VELDVSITQRPALGAIEAQGTTLHVLNANTTSNGNLRVDLSQPLPTEGTLRYTTRVIYGEREKDVRVVQDSTTSIEFSTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34965; Mature: 34834
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLVRLQKRSISRNRHHTRIGLCCITVAALSLSACSSENSSSKETRPKIEQAIGAQVDTP CCEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC RVTLIDQGNSPQQLVTYRDDGTQTTRRIKISDGLTHHTESAAQLDTTAPHGGDVTSLTTD EEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCCCEEEEECC ATVSTTRKDSQRSVTAIIDHPTIDDLEHSRDIDSTHGFQLGWFGADNGRISSVNLAAPVD CEEECCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCEEEEEEECCCCEEEEEEEECCCC ASDDGRALMERFLMKMVNIPIIFPEEPIGPSARWTVDSRVTGEATMLQTTTFTLTSIKGN CCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCEEEECCCCCCCEEEEEEEEEEEEEECCC NVELDVSITQRPALGAIEAQGTTLHVLNANTTSNGNLRVDLSQPLPTEGTLRYTTRVIYG CEEEEEEEECCCCCCEEECCCCEEEEEECCCCCCCCEEEEECCCCCCCCEEEEEEEEEEC EREKDVRVVQDSTTSIEFSTP CCCCCEEEEECCCCEEEECCC >Mature Secondary Structure TLVRLQKRSISRNRHHTRIGLCCITVAALSLSACSSENSSSKETRPKIEQAIGAQVDTP CEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC RVTLIDQGNSPQQLVTYRDDGTQTTRRIKISDGLTHHTESAAQLDTTAPHGGDVTSLTTD EEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCCCEEEEECC ATVSTTRKDSQRSVTAIIDHPTIDDLEHSRDIDSTHGFQLGWFGADNGRISSVNLAAPVD CEEECCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCEEEEEEECCCCEEEEEEEECCCC ASDDGRALMERFLMKMVNIPIIFPEEPIGPSARWTVDSRVTGEATMLQTTTFTLTSIKGN CCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCEEEECCCCCCCEEEEEEEEEEEEEECCC NVELDVSITQRPALGAIEAQGTTLHVLNANTTSNGNLRVDLSQPLPTEGTLRYTTRVIYG CEEEEEEEECCCCCCEEECCCCEEEEEECCCCCCCCEEEEECCCCCCCCEEEEEEEEEEC EREKDVRVVQDSTTSIEFSTP CCCCCEEEEECCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA