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The map label for this gene is ycbL [C]

Identifier: 38233947

GI number: 38233947

Start: 1379878

End: 1380534

Strand: Reverse

Name: ycbL [C]

Synonym: DIP1361

Alternate gene names: 38233947

Gene position: 1380534-1379878 (Counterclockwise)

Preceding gene: 38233948

Following gene: 38233946

Centisome position: 55.47

GC content: 48.1

Gene sequence:

>657_bases
ATGAACCACATGGAGATTTTGAGTTTTCCGGCAGGACCGTATCAAACCAATTGTTACGTGGTGCTGTCGGAGGAATCTGA
GGGGCGTCGATACGCAAGCGTGATAGACCCTGGGCTCCGCGCGAAAGAGCTAATTGATCAGTACTGTGAAGAAAACCGCG
TCGAAGTAGTGCAAGTTTTGCTCACTCATGGCCATATTGATCACTGCAGGGATGCTGCTGCTCTTGCTAATGGTTGGGGA
GTGGCGTTGCAGATTCATCGCTACGATGAATTCTTTTTGGACAAGGGAAATGGAATGTCGGAGGACTCGAGATTACTTTT
CCACGCCGATGCGATGAATCTCCCAGATTCAGTGAGCTATTTAGGCGATGGCGATGAAGTTGAACTTGGTGGTCAACGAT
TCGTTGTTCGTCATGCGCCTGGTCATTCACCTGGGTGCGTCTTATTCGTTGGTAAAGACTTCTGTTTTTCAGGTGATGTG
CTTTTCAAAGGATCAATAGGACGGACTGATCTCGCGCACTCTGATCCTCATGCTATGTCGAACAGTATAAAAAGTGTAGT
TCTGGGGTTGGAGGATTCATTGACAATATTGCCTGGGCATGGTCCAGCTACCACGATGCGAGCTGAGAAGGCTTCAAATC
CTTATTTGAGGGTGTAG

Upstream 100 bases:

>100_bases
TGATGAGCAAGGTACTGTTGTTCATTCCCAGTTGGTCGATGAGATCACGACTGAGCCTGATTATGCTGCTGCTTTGGCAT
CCATCAAGTAACACGGTTGG

Downstream 100 bases:

>100_bases
CACTCGAATTGTTTTGTTGCTACCGCTAAGCTGTATCGACGTGAGTAAAAAGAAGCTGCAGACGATCCAAGCCCCTAAAG
GCGTGCCAGACTATATTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MNHMEILSFPAGPYQTNCYVVLSEESEGRRYASVIDPGLRAKELIDQYCEENRVEVVQVLLTHGHIDHCRDAAALANGWG
VALQIHRYDEFFLDKGNGMSEDSRLLFHADAMNLPDSVSYLGDGDEVELGGQRFVVRHAPGHSPGCVLFVGKDFCFSGDV
LFKGSIGRTDLAHSDPHAMSNSIKSVVLGLEDSLTILPGHGPATTMRAEKASNPYLRV

Sequences:

>Translated_218_residues
MNHMEILSFPAGPYQTNCYVVLSEESEGRRYASVIDPGLRAKELIDQYCEENRVEVVQVLLTHGHIDHCRDAAALANGWG
VALQIHRYDEFFLDKGNGMSEDSRLLFHADAMNLPDSVSYLGDGDEVELGGQRFVVRHAPGHSPGCVLFVGKDFCFSGDV
LFKGSIGRTDLAHSDPHAMSNSIKSVVLGLEDSLTILPGHGPATTMRAEKASNPYLRV
>Mature_218_residues
MNHMEILSFPAGPYQTNCYVVLSEESEGRRYASVIDPGLRAKELIDQYCEENRVEVVQVLLTHGHIDHCRDAAALANGWG
VALQIHRYDEFFLDKGNGMSEDSRLLFHADAMNLPDSVSYLGDGDEVELGGQRFVVRHAPGHSPGCVLFVGKDFCFSGDV
LFKGSIGRTDLAHSDPHAMSNSIKSVVLGLEDSLTILPGHGPATTMRAEKASNPYLRV

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Escherichia coli, GI1787158, Length=213, Percent_Identity=36.6197183098592, Blast_Score=131, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI17538952, Length=191, Percent_Identity=25.6544502617801, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 23901; Mature: 23901

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHMEILSFPAGPYQTNCYVVLSEESEGRRYASVIDPGLRAKELIDQYCEENRVEVVQVL
CCCCEEEECCCCCCCCEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHCCHHHHHHHH
LTHGHIDHCRDAAALANGWGVALQIHRYDEFFLDKGNGMSEDSRLLFHADAMNLPDSVSY
HHCCCHHHHHHHHHHCCCCEEEEEEEECCEEEEECCCCCCCCCEEEEEECCCCCCCCHHH
LGDGDEVELGGQRFVVRHAPGHSPGCVLFVGKDFCFSGDVLFKGSIGRTDLAHSDPHAMS
CCCCCEEEECCEEEEEEECCCCCCCEEEEECCCCEECCCEEEECCCCCCCCCCCCCHHHH
NSIKSVVLGLEDSLTILPGHGPATTMRAEKASNPYLRV
HHHHHEEECCCCCEEEEECCCCCCCEEHHCCCCCEEEC
>Mature Secondary Structure
MNHMEILSFPAGPYQTNCYVVLSEESEGRRYASVIDPGLRAKELIDQYCEENRVEVVQVL
CCCCEEEECCCCCCCCEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHCCHHHHHHHH
LTHGHIDHCRDAAALANGWGVALQIHRYDEFFLDKGNGMSEDSRLLFHADAMNLPDSVSY
HHCCCHHHHHHHHHHCCCCEEEEEEEECCEEEEECCCCCCCCCEEEEEECCCCCCCCHHH
LGDGDEVELGGQRFVVRHAPGHSPGCVLFVGKDFCFSGDVLFKGSIGRTDLAHSDPHAMS
CCCCCEEEECCEEEEEEECCCCCCCEEEEECCCCEECCCEEEECCCCCCCCCCCCCHHHH
NSIKSVVLGLEDSLTILPGHGPATTMRAEKASNPYLRV
HHHHHEEECCCCCEEEEECCCCCCCEEHHCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]