| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is yceG [C]
Identifier: 38233934
GI number: 38233934
Start: 1360160
End: 1361308
Strand: Reverse
Name: yceG [C]
Synonym: DIP1348
Alternate gene names: 38233934
Gene position: 1361308-1360160 (Counterclockwise)
Preceding gene: 38233935
Following gene: 38233933
Centisome position: 54.7
GC content: 48.74
Gene sequence:
>1149_bases ATGCGAATGGAAAGTAAATACGTCAAACGGCGTCAACGTGGTTTGGCCGTGTTGGTTGCTGCCTTAGTCTTGATTATTGG TTCGGTAATTTACATCGGCGTCCATTTTGTCAACGGAGGGTCTGATTACAAGGGTGCGGGCAACGGAGAGATGGCGCTTG TGGAGATCAAAGAAGGGTCGTCTCTTTCCGAACTAGGGCCTGAACTTGCCGAGCGTGGGATCGTCGCAAGTAACGATGCT TTCCAAGGCGCTGCATTTTCTAATCCGGGGGCCAGCCAAGTTAAGCCAGGTTTTTATCGCCTAGAAAAGAAAATGAGTGC TGCAGAAGCAGTCAAAGCACTGCTCGATCCTTCGCGTAAGATCGATATGCTCGAAATCCATGGTGGCTCCACATTGATAG ACGTCACAGTGGTTAAGGGACAAACGCGTAAAGGAATCTACTCAATGATTTCAGACGTGACGTGTTCTCAAGGCTCGACC AAATGCATTAGTTCTGAGGAACTGCAGCAGGTAGGTGCAACAGCATCGTTGGAAGAACTTGGAGTTCCAGATTGGGCTCG GGATGCAGTTGCTGCGCGTGCAAATGATCCTAAACGTTTGGAAGGTTTGATTGTTCCAGGGTCATATATCGTTAATCCAG AAAAAGATGCCCTTGGCATTTTGCAGGATCTGATTAAGCGTGGTGCCGAAACATTCGAAAAGACCTCACTTGCGCAGCGC GCACAGACTGTTGGGCTGAGTCCTTATGAGTTGCTCACCGCGGCTTCGCTTGTAGAACGCGAAGCGCCAGCAGGAGACTT TGACAAAGTTGCGCGGGTCATTCTTAATCGTTTGGCGAAGCCAATGCGTCTTGAGTTTGACTCAACTGTGAACTATGGCT TGGCAGAACAAGAAGTCGCTACGACCAACGAGGACCGCGCTCGCGTGACTGCATGGAATACTTATGCTAAAGATGGGTTG CCAGATACTCCGATTGCTAGTGCCTCCGTTCAAGCTATTGAAGCACTTGAAAATCCTGCCGAGGGGGACTGGCTGTACTT CGTAACGATTGATAAAAACGGAACCACTGTGTTCACCAATAATTTTGAGGATCACCAAAATGCTACCCGCGATTCGATTG AAAATGGCGTGTTAGATAGCAATCGATAA
Upstream 100 bases:
>100_bases GTAGCATAATACGGCGCTGCAACTGAAAATTATCGCTGTAAAAAGTAGAATCAATAATCTAGCAAGGTCAGTAGCGACCT GAAACGAAAGGCTCACATCG
Downstream 100 bases:
>100_bases GCGTTAATGCGCCTTGTGGCCTTATCCTAAACAATCAGGATAAGGCCATTTTATTTTTGTTACGAACCTAAAAGCGGCTT GGCGGGGGTATCTATTGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MRMESKYVKRRQRGLAVLVAALVLIIGSVIYIGVHFVNGGSDYKGAGNGEMALVEIKEGSSLSELGPELAERGIVASNDA FQGAAFSNPGASQVKPGFYRLEKKMSAAEAVKALLDPSRKIDMLEIHGGSTLIDVTVVKGQTRKGIYSMISDVTCSQGST KCISSEELQQVGATASLEELGVPDWARDAVAARANDPKRLEGLIVPGSYIVNPEKDALGILQDLIKRGAETFEKTSLAQR AQTVGLSPYELLTAASLVEREAPAGDFDKVARVILNRLAKPMRLEFDSTVNYGLAEQEVATTNEDRARVTAWNTYAKDGL PDTPIASASVQAIEALENPAEGDWLYFVTIDKNGTTVFTNNFEDHQNATRDSIENGVLDSNR
Sequences:
>Translated_382_residues MRMESKYVKRRQRGLAVLVAALVLIIGSVIYIGVHFVNGGSDYKGAGNGEMALVEIKEGSSLSELGPELAERGIVASNDA FQGAAFSNPGASQVKPGFYRLEKKMSAAEAVKALLDPSRKIDMLEIHGGSTLIDVTVVKGQTRKGIYSMISDVTCSQGST KCISSEELQQVGATASLEELGVPDWARDAVAARANDPKRLEGLIVPGSYIVNPEKDALGILQDLIKRGAETFEKTSLAQR AQTVGLSPYELLTAASLVEREAPAGDFDKVARVILNRLAKPMRLEFDSTVNYGLAEQEVATTNEDRARVTAWNTYAKDGL PDTPIASASVQAIEALENPAEGDWLYFVTIDKNGTTVFTNNFEDHQNATRDSIENGVLDSNR >Mature_382_residues MRMESKYVKRRQRGLAVLVAALVLIIGSVIYIGVHFVNGGSDYKGAGNGEMALVEIKEGSSLSELGPELAERGIVASNDA FQGAAFSNPGASQVKPGFYRLEKKMSAAEAVKALLDPSRKIDMLEIHGGSTLIDVTVVKGQTRKGIYSMISDVTCSQGST KCISSEELQQVGATASLEELGVPDWARDAVAARANDPKRLEGLIVPGSYIVNPEKDALGILQDLIKRGAETFEKTSLAQR AQTVGLSPYELLTAASLVEREAPAGDFDKVARVILNRLAKPMRLEFDSTVNYGLAEQEVATTNEDRARVTAWNTYAKDGL PDTPIASASVQAIEALENPAEGDWLYFVTIDKNGTTVFTNNFEDHQNATRDSIENGVLDSNR
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=332, Percent_Identity=28.0120481927711, Blast_Score=94, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 41171; Mature: 41171
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMESKYVKRRQRGLAVLVAALVLIIGSVIYIGVHFVNGGSDYKGAGNGEMALVEIKEGS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEECCCC SLSELGPELAERGIVASNDAFQGAAFSNPGASQVKPGFYRLEKKMSAAEAVKALLDPSRK CHHHCCHHHHHCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC IDMLEIHGGSTLIDVTVVKGQTRKGIYSMISDVTCSQGSTKCISSEELQQVGATASLEEL EEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHC GVPDWARDAVAARANDPKRLEGLIVPGSYIVNPEKDALGILQDLIKRGAETFEKTSLAQR CCCCHHHHHHHHCCCCHHHHCEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH AQTVGLSPYELLTAASLVEREAPAGDFDKVARVILNRLAKPMRLEFDSTVNYGLAEQEVA HHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHH TTNEDRARVTAWNTYAKDGLPDTPIASASVQAIEALENPAEGDWLYFVTIDKNGTTVFTN CCCCCCCEEEEECCHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEC NFEDHQNATRDSIENGVLDSNR CCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRMESKYVKRRQRGLAVLVAALVLIIGSVIYIGVHFVNGGSDYKGAGNGEMALVEIKEGS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEEEEECCCC SLSELGPELAERGIVASNDAFQGAAFSNPGASQVKPGFYRLEKKMSAAEAVKALLDPSRK CHHHCCHHHHHCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC IDMLEIHGGSTLIDVTVVKGQTRKGIYSMISDVTCSQGSTKCISSEELQQVGATASLEEL EEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHC GVPDWARDAVAARANDPKRLEGLIVPGSYIVNPEKDALGILQDLIKRGAETFEKTSLAQR CCCCHHHHHHHHCCCCHHHHCEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH AQTVGLSPYELLTAASLVEREAPAGDFDKVARVILNRLAKPMRLEFDSTVNYGLAEQEVA HHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHH TTNEDRARVTAWNTYAKDGLPDTPIASASVQAIEALENPAEGDWLYFVTIDKNGTTVFTN CCCCCCCEEEEECCHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEC NFEDHQNATRDSIENGVLDSNR CCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]