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The map label for this gene is yurY [H]

Identifier: 38233878

GI number: 38233878

Start: 1300955

End: 1301713

Strand: Reverse

Name: yurY [H]

Synonym: DIP1293

Alternate gene names: 38233878

Gene position: 1301713-1300955 (Counterclockwise)

Preceding gene: 38233879

Following gene: 38233877

Centisome position: 52.31

GC content: 47.3

Gene sequence:

>759_bases
ATGAGCACTCTTGAAATCAAAAATCTCCACGCCCAAGTTGTACCCGCTGATGAAAGCGCAGCACCAAAGCCAATTCTTAA
AGGCGTAAACCTCACTATTAAATCAGGTGAAACTCACGCCATCATGGGACCAAACGGTTCTGGTAAATCTACCTTGGCAT
ACACCTTGTCGGGTCATCCGCGCTATGAGGTTACGGATGGTGAAGTACTACTCGATGGCGAAAATATCCTTGATATGGAC
ATCGATGAGCGTGCACGTGCCGGGCTTTTCTTGGCTATGCAGTACCCAACTGAGATTCCTGGTGTTTCCATGGCCAATTT
CTTGCGTTCTGCAGCCACTGCTGTACGCGGTGAAGCTCCTAAACTGCGTGAATGGGTTAAAGAAGTAAAACAAGCCCAGC
AGGATCTTAAAATCGATAAAGCCTTTAATGAGCGTTCGGTCAACGAGGGGTTCTCTGGCGGAGAAAAGAAACGCCACGAA
GTCCTGCAACTTGATCTTTTGCAGCCTAAATTCGCTGTGATGGATGAAACAGACTCCGGTCTTGACGTGGACGCATTGCG
CATTGTTTCTGAAGGAATCAACCGTTACCAAGAAAAATCTAACGGTGGTATTTTGATGATTACTCACTACAAGCGCATTT
TGAATTATGTTCAGCCCGATTTTGTCCACGTGTTTGCCAATGGCCAGATCATTACCTCCGGCGGTCCTGAGCTAGCTGAT
GACCTAGAAGCAAACGGCTACGACCGGTTCTTGGCATAA

Upstream 100 bases:

>100_bases
TCAGTTCGTGAAGACCTGGAAAATCGTGTGTCAGAAGAACTCAAAACCTTCCAGAACAGTCGAAACGCCTAAAATCTACA
AACGGAAAGCACATCCCACT

Downstream 100 bases:

>100_bases
TGCACACACAATTCGTTACCGAGGCTGGGGAACTTAACTCTGAGGCTATCCGCGCGGAATTTCCAATTCTGGCGCGGACG
GTACGTGGCGATAAGCCACT

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: VEG296 [H]

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSTLEIKNLHAQVVPADESAAPKPILKGVNLTIKSGETHAIMGPNGSGKSTLAYTLSGHPRYEVTDGEVLLDGENILDMD
IDERARAGLFLAMQYPTEIPGVSMANFLRSAATAVRGEAPKLREWVKEVKQAQQDLKIDKAFNERSVNEGFSGGEKKRHE
VLQLDLLQPKFAVMDETDSGLDVDALRIVSEGINRYQEKSNGGILMITHYKRILNYVQPDFVHVFANGQIITSGGPELAD
DLEANGYDRFLA

Sequences:

>Translated_252_residues
MSTLEIKNLHAQVVPADESAAPKPILKGVNLTIKSGETHAIMGPNGSGKSTLAYTLSGHPRYEVTDGEVLLDGENILDMD
IDERARAGLFLAMQYPTEIPGVSMANFLRSAATAVRGEAPKLREWVKEVKQAQQDLKIDKAFNERSVNEGFSGGEKKRHE
VLQLDLLQPKFAVMDETDSGLDVDALRIVSEGINRYQEKSNGGILMITHYKRILNYVQPDFVHVFANGQIITSGGPELAD
DLEANGYDRFLA
>Mature_251_residues
STLEIKNLHAQVVPADESAAPKPILKGVNLTIKSGETHAIMGPNGSGKSTLAYTLSGHPRYEVTDGEVLLDGENILDMDI
DERARAGLFLAMQYPTEIPGVSMANFLRSAATAVRGEAPKLREWVKEVKQAQQDLKIDKAFNERSVNEGFSGGEKKRHEV
LQLDLLQPKFAVMDETDSGLDVDALRIVSEGINRYQEKSNGGILMITHYKRILNYVQPDFVHVFANGQIITSGGPELADD
LEANGYDRFLA

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI42741659, Length=212, Percent_Identity=28.7735849056604, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI9961252, Length=224, Percent_Identity=27.6785714285714, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI4505771, Length=224, Percent_Identity=27.6785714285714, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI255708477, Length=235, Percent_Identity=27.6595744680851, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI9961250, Length=226, Percent_Identity=27.4336283185841, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI1787972, Length=248, Percent_Identity=45.1612903225806, Blast_Score=216, Evalue=1e-57,
Organism=Escherichia coli, GI87081709, Length=228, Percent_Identity=26.7543859649123, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786698, Length=192, Percent_Identity=29.1666666666667, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787029, Length=227, Percent_Identity=29.0748898678414, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=222, Percent_Identity=31.5315315315315, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI212646699, Length=238, Percent_Identity=30.2521008403361, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI193211017, Length=222, Percent_Identity=31.0810810810811, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI193211015, Length=222, Percent_Identity=31.0810810810811, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17541710, Length=242, Percent_Identity=27.6859504132231, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17567265, Length=218, Percent_Identity=28.8990825688073, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI25146777, Length=214, Percent_Identity=28.0373831775701, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI193209708, Length=229, Percent_Identity=30.5676855895196, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17565938, Length=216, Percent_Identity=26.8518518518519, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17543740, Length=214, Percent_Identity=26.1682242990654, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17533971, Length=233, Percent_Identity=27.4678111587983, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI193202349, Length=218, Percent_Identity=27.0642201834862, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6323217, Length=177, Percent_Identity=27.1186440677966, Blast_Score=62, Evalue=1e-10,
Organism=Drosophila melanogaster, GI281363262, Length=220, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24653245, Length=220, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24659289, Length=182, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27682; Mature: 27550

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLEIKNLHAQVVPADESAAPKPILKGVNLTIKSGETHAIMGPNGSGKSTLAYTLSGHP
CCCEEEECCEEEEEECCCCCCCCHHHCCCEEEEECCCEEEEECCCCCCCCEEEEEECCCC
RYEVTDGEVLLDGENILDMDIDERARAGLFLAMQYPTEIPGVSMANFLRSAATAVRGEAP
CEEECCCEEEECCCCEEECCCCCHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCH
KLREWVKEVKQAQQDLKIDKAFNERSVNEGFSGGEKKRHEVLQLDLLQPKFAVMDETDSG
HHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCC
LDVDALRIVSEGINRYQEKSNGGILMITHYKRILNYVQPDFVHVFANGQIITSGGPELAD
CCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCEEEEEECCEEEECCCCHHHH
DLEANGYDRFLA
HCCCCCCHHCCC
>Mature Secondary Structure 
STLEIKNLHAQVVPADESAAPKPILKGVNLTIKSGETHAIMGPNGSGKSTLAYTLSGHP
CCEEEECCEEEEEECCCCCCCCHHHCCCEEEEECCCEEEEECCCCCCCCEEEEEECCCC
RYEVTDGEVLLDGENILDMDIDERARAGLFLAMQYPTEIPGVSMANFLRSAATAVRGEAP
CEEECCCEEEECCCCEEECCCCCHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCH
KLREWVKEVKQAQQDLKIDKAFNERSVNEGFSGGEKKRHEVLQLDLLQPKFAVMDETDSG
HHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCC
LDVDALRIVSEGINRYQEKSNGGILMITHYKRILNYVQPDFVHVFANGQIITSGGPELAD
CCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCEEEEEECCEEEECCCCHHHH
DLEANGYDRFLA
HCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]