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The map label for this gene is ybhB [C]

Identifier: 38233853

GI number: 38233853

Start: 1272452

End: 1272991

Strand: Reverse

Name: ybhB [C]

Synonym: DIP1265

Alternate gene names: 38233853

Gene position: 1272991-1272452 (Counterclockwise)

Preceding gene: 38233855

Following gene: 38233850

Centisome position: 51.15

GC content: 47.22

Gene sequence:

>540_bases
ATGACCTATTCCAATAATCATGATCGATTCCCAGGTGCTGACCCATATGCACCCCTTAACGAACTTCCAACATTCTCATT
GCACTCGGAAGACTTTTCTGATGGCGAAAAATTTAATTCGATTCACTTGGGAGGAAATGATGTTTCTCCACATCTTGAGT
GGAACACATTACCTGAGGGGACAAAATCTATTGCTATCACTTGCTTTGACCCTGATGCTCCCACTGCTTCAGGTTTTTGG
CACTGGGCGGTTTTTAACATTCCAGTTTCCCAAGTATCAATTGCACAAGGTGCAGCAAACGATGGCTCGCTCGACCAGCT
CGGCGCGATAAGTCTTCGTGGAGATTCTGGAAAACGGGGTTATTACGGCCCTAATCCGCCTGCTGGCCATGGCCCGCATC
GTTATTTATTTGCAGTGCATGCGGTTGACGTTGAATCTTTAGACGTAGATCCAGATTCTTCACCCGCAGTGTTGGGGTTC
AATCTTTACTTCCACAGTTTGGGCCGTGCGATTCGTTGGGGATGGTATGAGAACTCCTAG

Upstream 100 bases:

>100_bases
GGGGCTTAAGATTGATTAATACTGCATTAGTAGTCTTCCCGATAAACCTGCTGCTGAAAAATCCCAGACGTTTGCTTTTT
ATATGTGTATAAAGGCGAGT

Downstream 100 bases:

>100_bases
CTCCGTTCCTCTCGGCTTACGTGTAGGAGCCGCATTTCTAGCCGTAGCGTCGCACTCGCCATATTTACGTTTATTCATGT
CCTAAAGGACGGGTGGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MTYSNNHDRFPGADPYAPLNELPTFSLHSEDFSDGEKFNSIHLGGNDVSPHLEWNTLPEGTKSIAITCFDPDAPTASGFW
HWAVFNIPVSQVSIAQGAANDGSLDQLGAISLRGDSGKRGYYGPNPPAGHGPHRYLFAVHAVDVESLDVDPDSSPAVLGF
NLYFHSLGRAIRWGWYENS

Sequences:

>Translated_179_residues
MTYSNNHDRFPGADPYAPLNELPTFSLHSEDFSDGEKFNSIHLGGNDVSPHLEWNTLPEGTKSIAITCFDPDAPTASGFW
HWAVFNIPVSQVSIAQGAANDGSLDQLGAISLRGDSGKRGYYGPNPPAGHGPHRYLFAVHAVDVESLDVDPDSSPAVLGF
NLYFHSLGRAIRWGWYENS
>Mature_178_residues
TYSNNHDRFPGADPYAPLNELPTFSLHSEDFSDGEKFNSIHLGGNDVSPHLEWNTLPEGTKSIAITCFDPDAPTASGFWH
WAVFNIPVSQVSIAQGAANDGSLDQLGAISLRGDSGKRGYYGPNPPAGHGPHRYLFAVHAVDVESLDVDPDSSPAVLGFN
LYFHSLGRAIRWGWYENS

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786990, Length=152, Percent_Identity=46.0526315789474, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1786757, Length=153, Percent_Identity=39.8692810457516, Blast_Score=113, Evalue=7e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 19500; Mature: 19369

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYSNNHDRFPGADPYAPLNELPTFSLHSEDFSDGEKFNSIHLGGNDVSPHLEWNTLPEG
CCCCCCCCCCCCCCCCCCHHHCCCEEECCCCCCCCCCCCEEEECCCCCCCCEEECCCCCC
TKSIAITCFDPDAPTASGFWHWAVFNIPVSQVSIAQGAANDGSLDQLGAISLRGDSGKRG
CCEEEEEEECCCCCCCCCEEEEEEEECCHHHEEEECCCCCCCCCCCCEEEEEECCCCCCC
YYGPNPPAGHGPHRYLFAVHAVDVESLDVDPDSSPAVLGFNLYFHSLGRAIRWGWYENS
CCCCCCCCCCCCCEEEEEEEEECEEEECCCCCCCCEEEEEHHHHHHHCHHEECCEECCC
>Mature Secondary Structure 
TYSNNHDRFPGADPYAPLNELPTFSLHSEDFSDGEKFNSIHLGGNDVSPHLEWNTLPEG
CCCCCCCCCCCCCCCCCHHHCCCEEECCCCCCCCCCCCEEEECCCCCCCCEEECCCCCC
TKSIAITCFDPDAPTASGFWHWAVFNIPVSQVSIAQGAANDGSLDQLGAISLRGDSGKRG
CCEEEEEEECCCCCCCCCEEEEEEEECCHHHEEEECCCCCCCCCCCCEEEEEECCCCCCC
YYGPNPPAGHGPHRYLFAVHAVDVESLDVDPDSSPAVLGFNLYFHSLGRAIRWGWYENS
CCCCCCCCCCCCCEEEEEEEEECEEEECCCCCCCCEEEEEHHHHHHHCHHEECCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]