Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is 37680806

Identifier: 37680806

GI number: 37680806

Start: 2650355

End: 2651386

Strand: Direct

Name: 37680806

Synonym: VV2622

Alternate gene names: NA

Gene position: 2650355-2651386 (Clockwise)

Preceding gene: 37680805

Following gene: 37680807

Centisome position: 79.01

GC content: 52.13

Gene sequence:

>1032_bases
ATGGCTTTCTTTTCTCTCGCCTTTGGTACGGCAACCAAAAACCGCGACGGCAAAATCATCGAAGCGTTTTTTCCAAACCC
TGTTCTTAACCCAAGCGAGGCACTAGTCAACGCTCTAGCAGCCGTTGCGGGCTACGAGCAAGGCAACCAAGCTATCGAGA
TCTCTGCGGCGCAAAGTGCAGAACTGGCAGCAGCGTTCCAAGCAAATGGTGATGCAGCAAACGCCTCTTTCGCAGCAAAA
GCGGCAGAGTCAGCACAACCACTGGTACTGGTTATTCTTGCTACTGACGAGCAGCCACAAAGCGTTGCTGAAGGTTTCCT
AAAACTGCAACTCATCTCTAACCGCCTAGTTCAACCACACGGTACCGTACTAGACGGCATTTTCGGTCTATTGCACAACA
TCGCATGGACCAACGAAGGTCCAATCGATCTGCCTGAACTGGCAGAACGCCAAATCGAAGCGCGTTTAGCTGGCCGTGTA
CTCACTGTCGATTGCGTCGACAAGTTCCCTAAAATGGTGGATTACGTGGTACCAACAGGCGTACGCATCGCGGACACTTC
TCGCGTGCGTCTTGGCGCTCACGTTGGTGAAGGCACTACTGTCATGCACGAAGGCTTCATCAACTTCAACGCGGGTACCA
CAGGTGTAAGCATGGTTGAAGGCCGAATCTCTGCGGGCGTTGTTGTCGGTAACGGCTCTGACATTGGTGGCGGCGCGTCG
ATCATGGGTACCCTATCTGGCGGTGGTAAAGTGGTTGTGTCTATTGGTGAAAACTCACTGCTTGGCGCAAACGCAGGCCT
TGGTTTCCCACTGGGTGATCGCTGTACAGTAGAATCTGGCCTTTACGTCACCGCGGGCTCTAAAGTACGCATGCTTGATT
CCACAGGCCAAGAAGTTGAAATGGTTAAAGCGCGCGATTTAGCAGGCGTATCTGACCTACTGTTCCGTCGCAACTCAGTG
ACTGGCCAAATTGAATGCTTGGCGAACAAAACTGCGGTAGAACTGAACAGCGAGCTGCACAAAAACAACTAA

Upstream 100 bases:

>100_bases
GTTTAAAGTCTTTTTTTGTCTCTTTATGATGGCTATAACTTAATTCCAGCGCTTGCCAGTGAATGGCGCGTGACAAAGAC
TCAACACATGGAGATCAACT

Downstream 100 bases:

>100_bases
TCTCGAACATTCTGAGATAGCGTTAGTTCAAGCCCTTCATCAATGAAGGGCTTTTCTTTTTCGAAAATTTGCCCTCAACC
ACTTTGCTTTCCTTTTCACT

Product: tetrahydrodipicolinate N-succinyltransferase

Products: CoA; (R)-2-(succinylamino)-6-oxoheptanedioate

Alternate protein names: Transferase; Tetrahydrodipicolinate Succinylase; Tetrahydropicolinate Succinylase; Tetrahydrodipicolinate N- Succinyltransferase; Transferase Hexapeptide Repeat Containing Protein; Succinyltransferase; Succinyl-Transferase; Tranferase; Tetrahydrodipicolinate N-Succinyltransferase-Like Protein; Lysine Biosynthesis-Like Protein; Transferase Tetrahydrodipicolinate N-Succinyltransferase

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MAFFSLAFGTATKNRDGKIIEAFFPNPVLNPSEALVNALAAVAGYEQGNQAIEISAAQSAELAAAFQANGDAANASFAAK
AAESAQPLVLVILATDEQPQSVAEGFLKLQLISNRLVQPHGTVLDGIFGLLHNIAWTNEGPIDLPELAERQIEARLAGRV
LTVDCVDKFPKMVDYVVPTGVRIADTSRVRLGAHVGEGTTVMHEGFINFNAGTTGVSMVEGRISAGVVVGNGSDIGGGAS
IMGTLSGGGKVVVSIGENSLLGANAGLGFPLGDRCTVESGLYVTAGSKVRMLDSTGQEVEMVKARDLAGVSDLLFRRNSV
TGQIECLANKTAVELNSELHKNN

Sequences:

>Translated_343_residues
MAFFSLAFGTATKNRDGKIIEAFFPNPVLNPSEALVNALAAVAGYEQGNQAIEISAAQSAELAAAFQANGDAANASFAAK
AAESAQPLVLVILATDEQPQSVAEGFLKLQLISNRLVQPHGTVLDGIFGLLHNIAWTNEGPIDLPELAERQIEARLAGRV
LTVDCVDKFPKMVDYVVPTGVRIADTSRVRLGAHVGEGTTVMHEGFINFNAGTTGVSMVEGRISAGVVVGNGSDIGGGAS
IMGTLSGGGKVVVSIGENSLLGANAGLGFPLGDRCTVESGLYVTAGSKVRMLDSTGQEVEMVKARDLAGVSDLLFRRNSV
TGQIECLANKTAVELNSELHKNN
>Mature_342_residues
AFFSLAFGTATKNRDGKIIEAFFPNPVLNPSEALVNALAAVAGYEQGNQAIEISAAQSAELAAAFQANGDAANASFAAKA
AESAQPLVLVILATDEQPQSVAEGFLKLQLISNRLVQPHGTVLDGIFGLLHNIAWTNEGPIDLPELAERQIEARLAGRVL
TVDCVDKFPKMVDYVVPTGVRIADTSRVRLGAHVGEGTTVMHEGFINFNAGTTGVSMVEGRISAGVVVGNGSDIGGGASI
MGTLSGGGKVVVSIGENSLLGANAGLGFPLGDRCTVESGLYVTAGSKVRMLDSTGQEVEMVKARDLAGVSDLLFRRNSVT
GQIECLANKTAVELNSELHKNN

Specific function: Unknown

COG id: COG2171

COG function: function code E; Tetrahydrodipicolinate N-succinyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.3.1.117

Molecular weight: Translated: 35650; Mature: 35519

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFFSLAFGTATKNRDGKIIEAFFPNPVLNPSEALVNALAAVAGYEQGNQAIEISAAQSA
CCEEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
ELAAAFQANGDAANASFAAKAAESAQPLVLVILATDEQPQSVAEGFLKLQLISNRLVQPH
CEEEEEECCCCCCCCHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHEEHHCCCCCCC
GTVLDGIFGLLHNIAWTNEGPIDLPELAERQIEARLAGRVLTVDCVDKFPKMVDYVVPTG
CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCC
VRIADTSRVRLGAHVGEGTTVMHEGFINFNAGTTGVSMVEGRISAGVVVGNGSDIGGGAS
EEEECCCEEEEEEECCCCCEEEEECEEEECCCCCCHHEEECCEEEEEEEECCCCCCCCEE
IMGTLSGGGKVVVSIGENSLLGANAGLGFPLGDRCTVESGLYVTAGSKVRMLDSTGQEVE
EEEEECCCCEEEEEECCCCEEECCCCCCCCCCCCEEECCCEEEECCCEEEEECCCCCCEE
MVKARDLAGVSDLLFRRNSVTGQIECLANKTAVELNSELHKNN
HHHHHHCCCHHHHHHHCCCCCEEEEEEECCCEEEECCHHHCCC
>Mature Secondary Structure 
AFFSLAFGTATKNRDGKIIEAFFPNPVLNPSEALVNALAAVAGYEQGNQAIEISAAQSA
CEEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
ELAAAFQANGDAANASFAAKAAESAQPLVLVILATDEQPQSVAEGFLKLQLISNRLVQPH
CEEEEEECCCCCCCCHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHEEHHCCCCCCC
GTVLDGIFGLLHNIAWTNEGPIDLPELAERQIEARLAGRVLTVDCVDKFPKMVDYVVPTG
CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCC
VRIADTSRVRLGAHVGEGTTVMHEGFINFNAGTTGVSMVEGRISAGVVVGNGSDIGGGAS
EEEECCCEEEEEEECCCCCEEEEECEEEECCCCCCHHEEECCEEEEEEEECCCCCCCCEE
IMGTLSGGGKVVVSIGENSLLGANAGLGFPLGDRCTVESGLYVTAGSKVRMLDSTGQEVE
EEEEECCCCEEEEEECCCCEEECCCCCCCCCCCCEEECCCEEEECCCEEEEECCCCCCEE
MVKARDLAGVSDLLFRRNSVTGQIECLANKTAVELNSELHKNN
HHHHHHCCCHHHHHHHCCCCCEEEEEEECCCEEEECCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinyl-CoA; (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate; H2O

Specific reaction: succinyl-CoA + (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate + H2O = CoA + (R)-2-(succinylamino)-6-oxoheptanedioate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA