Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

Click here to switch to the map view.

The map label for this gene is 37680805

Identifier: 37680805

GI number: 37680805

Start: 2650317

End: 2650460

Strand: Direct

Name: 37680805

Synonym: VV2621

Alternate gene names: NA

Gene position: 2650317-2650460 (Clockwise)

Preceding gene: 37680804

Following gene: 37680806

Centisome position: 79.01

GC content: 47.92

Gene sequence:

>144_bases
ATGGCGCGTGACAAAGACTCAACACATGGAGATCAACTATGGCTTTCTTTTCTCTCGCCTTTGGTACGGCAACCAAAAAC
CGCGACGGCAAAATCATCGAAGCGTTTTTTCCAAACCCTGTTCTTAACCCAAGCGAGGCACTAG

Upstream 100 bases:

>100_bases
CAAAGGGTATCCATCTACAGACTTTCTCCCTTTGAGGGGTTTAAAGTCTTTTTTTGTCTCTTTATGATGGCTATAACTTA
ATTCCAGCGCTTGCCAGTGA

Downstream 100 bases:

>100_bases
TCAACGCTCTAGCAGCCGTTGCGGGCTACGAGCAAGGCAACCAAGCTATCGAGATCTCTGCGGCGCAAAGTGCAGAACTG
GCAGCAGCGTTCCAAGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 47; Mature: 46

Protein sequence:

>47_residues
MARDKDSTHGDQLWLSFLSPLVRQPKTATAKSSKRFFQTLFLTQARH

Sequences:

>Translated_47_residues
MARDKDSTHGDQLWLSFLSPLVRQPKTATAKSSKRFFQTLFLTQARH
>Mature_46_residues
ARDKDSTHGDQLWLSFLSPLVRQPKTATAKSSKRFFQTLFLTQARH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5448; Mature: 5317

Theoretical pI: Translated: 11.65; Mature: 11.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARDKDSTHGDQLWLSFLSPLVRQPKTATAKSSKRFFQTLFLTQARH
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARDKDSTHGDQLWLSFLSPLVRQPKTATAKSSKRFFQTLFLTQARH
CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA