Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is ampG4 [H]
Identifier: 37680780
GI number: 37680780
Start: 2622951
End: 2624351
Strand: Direct
Name: ampG4 [H]
Synonym: VV2596
Alternate gene names: 37680780
Gene position: 2622951-2624351 (Clockwise)
Preceding gene: 37680779
Following gene: 37680785
Centisome position: 78.19
GC content: 48.89
Gene sequence:
>1401_bases ATGTCTTCATCACCAACAGTTTCATGGCGTGAAACTGTACAAAGTTATCTTGATCGACGCTTGCTATGGGTTTTTATGCT GGGCTGTTCCAGTGGTTTCCCGTGGGTACTCATTGGCTCAAACATGTCTGGCTGGCTAAAAGATGCGGGTTTGACGCGTG CTGCTATTGGCTACTTTGGCAGTGTCTTTGCTGTGTACGCCATTAACTTTCTTTGGGCACCTTTGGTAGACCGAGTAAAG CTTCCTCTACTTCATCGCTCTTTGGGTCAACGCCGCAGTTGGATATTTCTCTGCCAATCCTTAGTACTGATTTGTACTTT GTTGATCGCGGGAGTCAATCCGGCCAACAATCTCATGCTGACGTCGGCGCTTGCACTTGGCATCGCCATCGCTTCAGCAA CACAGGATATCGCTATCGATGCGTTCCGTATCGATACCTTCCCGAAATCCGATTCATCCAAACTGCCACAAGCATCGGCG ATGGCCGTTATTGGTTGGTGGACAGGCTATTCCTTGCCTGGTTATCTCGCCTTTATTAATGCCGATTCAATCGGTTGGAA CGGCGTATATTACGGCATGGCGGCCATTGTCGCGCTCTTGATGATTTTTACGTTACTGGTTGGCGAGCCCACCACGCGCC GAGAGCAATTGCAACAAGAGGCCGAACAGCGCCACAACCAATTGGTGGGTTCCAAAGTGGTCGCATGGTTGACGGTCACC GTGATCGAGCCTTTCCTTGATTTCTTCAAGCGCAATGGCGTCCGAGTGGCACTGACCCTACTGCTCTTTGTCTTCTTGTT TAAGATTGGCGAAGCGTTCTTAGGCCGAATGTCGATCACTTTCTATAAAGAAGTGGGCTTTAGCAATGAGCAAATTGGCT ATTACTCTAAGTTGCTTGGTTGGGGTATCACCATCTTCTTTACGCTGGTCGGCAGCATGATCAACGTTAAGTTCGGTATT GTTCGTGGTTTGATGATTGGCGGCATCGCTATGGCAGCGAGTAACTTGATGTTCGCTTGGATGGCGCAAGTCGGTCCGAA TGAAAATCTGTTCTTGGCGACGTTGATTGTCGACAACTTTACCTCTGCATTTTCAACCGTTGCGTTCGTCTCCTTCTTAA CCATGGTGACGGGACAAGCCTTCTCGGCGACGCAGTACGCTCTGCTGGCATCACTGGGCAACTTTGGTCGAACGACCTTA GCCTCCTTTAGTGGTGAGTTGGTGGACTACTTGGACAACTGGTCTGTGTTCTTTGTTATTACGGCTCTGATGGTTATCCC AAGCTTGATCATGCTCTATTCGCTGCGTCATTACTTCCATGATTTGCTTGAAAAAGCGAGAAAGGAATCGAGCGAAGAAG AGCCAAAACCTCACGACAACATCGACGCACAACAAAGTTAA
Upstream 100 bases:
>100_bases CCGTGGAACCAATCGTGATCACCAAGGCCACACTACTCCCATAAATATCCCCGCCCTTTGCAACGCAAGGGGCGTATTCT ACTAACTACAAGGATAGGTT
Downstream 100 bases:
>100_bases ATCCACTTTGTGTGCGTGGCTCCTTCACGACAAAGGCTTGCATTGGCAAGCCTTTTCTCGTTTGATGCATTCTCATTTTG AAGGCAGCGCCGATCATCTC
Product: putative AmpG protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MSSSPTVSWRETVQSYLDRRLLWVFMLGCSSGFPWVLIGSNMSGWLKDAGLTRAAIGYFGSVFAVYAINFLWAPLVDRVK LPLLHRSLGQRRSWIFLCQSLVLICTLLIAGVNPANNLMLTSALALGIAIASATQDIAIDAFRIDTFPKSDSSKLPQASA MAVIGWWTGYSLPGYLAFINADSIGWNGVYYGMAAIVALLMIFTLLVGEPTTRREQLQQEAEQRHNQLVGSKVVAWLTVT VIEPFLDFFKRNGVRVALTLLLFVFLFKIGEAFLGRMSITFYKEVGFSNEQIGYYSKLLGWGITIFFTLVGSMINVKFGI VRGLMIGGIAMAASNLMFAWMAQVGPNENLFLATLIVDNFTSAFSTVAFVSFLTMVTGQAFSATQYALLASLGNFGRTTL ASFSGELVDYLDNWSVFFVITALMVIPSLIMLYSLRHYFHDLLEKARKESSEEEPKPHDNIDAQQS
Sequences:
>Translated_466_residues MSSSPTVSWRETVQSYLDRRLLWVFMLGCSSGFPWVLIGSNMSGWLKDAGLTRAAIGYFGSVFAVYAINFLWAPLVDRVK LPLLHRSLGQRRSWIFLCQSLVLICTLLIAGVNPANNLMLTSALALGIAIASATQDIAIDAFRIDTFPKSDSSKLPQASA MAVIGWWTGYSLPGYLAFINADSIGWNGVYYGMAAIVALLMIFTLLVGEPTTRREQLQQEAEQRHNQLVGSKVVAWLTVT VIEPFLDFFKRNGVRVALTLLLFVFLFKIGEAFLGRMSITFYKEVGFSNEQIGYYSKLLGWGITIFFTLVGSMINVKFGI VRGLMIGGIAMAASNLMFAWMAQVGPNENLFLATLIVDNFTSAFSTVAFVSFLTMVTGQAFSATQYALLASLGNFGRTTL ASFSGELVDYLDNWSVFFVITALMVIPSLIMLYSLRHYFHDLLEKARKESSEEEPKPHDNIDAQQS >Mature_465_residues SSSPTVSWRETVQSYLDRRLLWVFMLGCSSGFPWVLIGSNMSGWLKDAGLTRAAIGYFGSVFAVYAINFLWAPLVDRVKL PLLHRSLGQRRSWIFLCQSLVLICTLLIAGVNPANNLMLTSALALGIAIASATQDIAIDAFRIDTFPKSDSSKLPQASAM AVIGWWTGYSLPGYLAFINADSIGWNGVYYGMAAIVALLMIFTLLVGEPTTRREQLQQEAEQRHNQLVGSKVVAWLTVTV IEPFLDFFKRNGVRVALTLLLFVFLFKIGEAFLGRMSITFYKEVGFSNEQIGYYSKLLGWGITIFFTLVGSMINVKFGIV RGLMIGGIAMAASNLMFAWMAQVGPNENLFLATLIVDNFTSAFSTVAFVSFLTMVTGQAFSATQYALLASLGNFGRTTLA SFSGELVDYLDNWSVFFVITALMVIPSLIMLYSLRHYFHDLLEKARKESSEEEPKPHDNIDAQQS
Specific function: Probably Acts As A Permease In The Beta-Lactamase Induction System And In Peptidoglycan Recycling. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786636, Length=418, Percent_Identity=32.0574162679426, Blast_Score=189, Evalue=5e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 51644; Mature: 51513
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSPTVSWRETVQSYLDRRLLWVFMLGCSSGFPWVLIGSNMSGWLKDAGLTRAAIGYFG CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHCCCHHHHHHHHH SVFAVYAINFLWAPLVDRVKLPLLHRSLGQRRSWIFLCQSLVLICTLLIAGVNPANNLML HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH TSALALGIAIASATQDIAIDAFRIDTFPKSDSSKLPQASAMAVIGWWTGYSLPGYLAFIN HHHHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCCCHHHHEEEEECCCCCCCCEEEEEE ADSIGWNGVYYGMAAIVALLMIFTLLVGEPTTRREQLQQEAEQRHNQLVGSKVVAWLTVT CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIEPFLDFFKRNGVRVALTLLLFVFLFKIGEAFLGRMSITFYKEVGFSNEQIGYYSKLLG HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH WGITIFFTLVGSMINVKFGIVRGLMIGGIAMAASNLMFAWMAQVGPNENLFLATLIVDNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHH TSAFSTVAFVSFLTMVTGQAFSATQYALLASLGNFGRTTLASFSGELVDYLDNWSVFFVI HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHH TALMVIPSLIMLYSLRHYFHDLLEKARKESSEEEPKPHDNIDAQQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SSSPTVSWRETVQSYLDRRLLWVFMLGCSSGFPWVLIGSNMSGWLKDAGLTRAAIGYFG CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHCCCHHHHHHHHH SVFAVYAINFLWAPLVDRVKLPLLHRSLGQRRSWIFLCQSLVLICTLLIAGVNPANNLML HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH TSALALGIAIASATQDIAIDAFRIDTFPKSDSSKLPQASAMAVIGWWTGYSLPGYLAFIN HHHHHHHHHHHHCCHHHEEEEEEECCCCCCCCCCCCCHHHHEEEEECCCCCCCCEEEEEE ADSIGWNGVYYGMAAIVALLMIFTLLVGEPTTRREQLQQEAEQRHNQLVGSKVVAWLTVT CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIEPFLDFFKRNGVRVALTLLLFVFLFKIGEAFLGRMSITFYKEVGFSNEQIGYYSKLLG HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH WGITIFFTLVGSMINVKFGIVRGLMIGGIAMAASNLMFAWMAQVGPNENLFLATLIVDNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHH TSAFSTVAFVSFLTMVTGQAFSATQYALLASLGNFGRTTLASFSGELVDYLDNWSVFFVI HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHH TALMVIPSLIMLYSLRHYFHDLLEKARKESSEEEPKPHDNIDAQQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]