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The map label for this gene is yfeN [H]

Identifier: 37680785

GI number: 37680785

Start: 2626711

End: 2627454

Strand: Direct

Name: yfeN [H]

Synonym: VV2601

Alternate gene names: 37680785

Gene position: 2626711-2627454 (Clockwise)

Preceding gene: 37680780

Following gene: 37680786

Centisome position: 78.3

GC content: 44.35

Gene sequence:

>744_bases
ATGCGTAAATCAATTTTAGCTCTAAGTATCTTTGCAGCAGCTGCTGCTGTTCCAGCTCAAGCAGAATACCTATATGGTTG
GGGTGACGTGAGCGTAAACTACCTCGACTGGTCTAACGGAACCGAAGATCGCAATGGCGGTTTCAAAAATGACTTCATGT
TCCTAGAGCTTGAAGGTGGTGCAGGATTCACTTGGGGTGAACTATATGGTTTTGCTGATTTTGAATTCCAAGACAGCACT
CCTGCTGGTGATAGCGCAATGGCTATGTCTACCAAAGGTTCTATCGCAGTAAAAACTGGTCTAGAAGAACTACGTTTCTA
CGCACAAACATACTCAACTGAGAACCAAGGCTTCCATGCACGTAATACAGTTGCAGGTCTATCTTACAACTTCTCAGGTG
ATAACTGGTACTTTAACCCTTGGGTAGGCTTCCACTACACAAATACGGTTGACTTTGCAGACATGAATGGCGGTATGGCT
GGTTGGGTTGCAGGTTACAATTTCAACTTAGGCGAACAAAAGTTCAGCATCAGCAACTGGCATGAAACTGAATTTGCTCG
TAAAGATGCTTACCTAGCAACTAACGGCGAAACCGACGATCTATCTTACAATGGTGCTCTAGCTGCTTGGTGGCACGCAA
CTTCTCAAATTAGCACTGGCGTTCAATACCGTTACGCTCATAACAAGCTAGGTCAGCCTCAAACAGACAATGCAATCATC
TACACAGTGAAGTACAACTTCTAA

Upstream 100 bases:

>100_bases
TTTATTTGCGATTTAAATCGCTATGATGCGCGCAAATCGGATAACACGTAGCGCAAGGATTAGCGTCTAAACACCGTTAC
AAATATAGAGAGTTCCCCTT

Downstream 100 bases:

>100_bases
TTCAACGGTGTTGTAAATTATCGCTTCAAATGGCGCCTGTTGGCGCCATTTTTATTTGCTTTCCTTATTTCCCTCATTAT
CCTTGCAGCAAACCTTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MRKSILALSIFAAAAAVPAQAEYLYGWGDVSVNYLDWSNGTEDRNGGFKNDFMFLELEGGAGFTWGELYGFADFEFQDST
PAGDSAMAMSTKGSIAVKTGLEELRFYAQTYSTENQGFHARNTVAGLSYNFSGDNWYFNPWVGFHYTNTVDFADMNGGMA
GWVAGYNFNLGEQKFSISNWHETEFARKDAYLATNGETDDLSYNGALAAWWHATSQISTGVQYRYAHNKLGQPQTDNAII
YTVKYNF

Sequences:

>Translated_247_residues
MRKSILALSIFAAAAAVPAQAEYLYGWGDVSVNYLDWSNGTEDRNGGFKNDFMFLELEGGAGFTWGELYGFADFEFQDST
PAGDSAMAMSTKGSIAVKTGLEELRFYAQTYSTENQGFHARNTVAGLSYNFSGDNWYFNPWVGFHYTNTVDFADMNGGMA
GWVAGYNFNLGEQKFSISNWHETEFARKDAYLATNGETDDLSYNGALAAWWHATSQISTGVQYRYAHNKLGQPQTDNAII
YTVKYNF
>Mature_247_residues
MRKSILALSIFAAAAAVPAQAEYLYGWGDVSVNYLDWSNGTEDRNGGFKNDFMFLELEGGAGFTWGELYGFADFEFQDST
PAGDSAMAMSTKGSIAVKTGLEELRFYAQTYSTENQGFHARNTVAGLSYNFSGDNWYFNPWVGFHYTNTVDFADMNGGMA
GWVAGYNFNLGEQKFSISNWHETEFARKDAYLATNGETDDLSYNGALAAWWHATSQISTGVQYRYAHNKLGQPQTDNAII
YTVKYNF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To V.parahaemolyticus ompK [H]

Homologues:

Organism=Escherichia coli, GI1788747, Length=242, Percent_Identity=42.1487603305785, Blast_Score=178, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018013 [H]

Pfam domain/function: PF03502 Channel_Tsx [H]

EC number: NA

Molecular weight: Translated: 27526; Mature: 27526

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSILALSIFAAAAAVPAQAEYLYGWGDVSVNYLDWSNGTEDRNGGFKNDFMFLELEGG
CCCCEEHHHHHHHHHCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCCCEEEEEECCC
AGFTWGELYGFADFEFQDSTPAGDSAMAMSTKGSIAVKTGLEELRFYAQTYSTENQGFHA
CCCCHHHHEEEECEEECCCCCCCCCEEEEECCCCEEEECCHHHHHHHHHHCCCCCCCCCC
RNTVAGLSYNFSGDNWYFNPWVGFHYTNTVDFADMNGGMAGWVAGYNFNLGEQKFSISNW
CCEEEEEEEEECCCCEEECCEECEEECCEEEEEECCCCEEEEEEEEECCCCCCEEECCCC
HETEFARKDAYLATNGETDDLSYNGALAAWWHATSQISTGVQYRYAHNKLGQPQTDNAII
CHHHHHHCCEEEEECCCCCCEECCCCEEEEEECCHHHHCCEEEEEHHHCCCCCCCCCEEE
YTVKYNF
EEEEECC
>Mature Secondary Structure
MRKSILALSIFAAAAAVPAQAEYLYGWGDVSVNYLDWSNGTEDRNGGFKNDFMFLELEGG
CCCCEEHHHHHHHHHCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCCCEEEEEECCC
AGFTWGELYGFADFEFQDSTPAGDSAMAMSTKGSIAVKTGLEELRFYAQTYSTENQGFHA
CCCCHHHHEEEECEEECCCCCCCCCEEEEECCCCEEEECCHHHHHHHHHHCCCCCCCCCC
RNTVAGLSYNFSGDNWYFNPWVGFHYTNTVDFADMNGGMAGWVAGYNFNLGEQKFSISNW
CCEEEEEEEEECCCCEEECCEECEEECCEEEEEECCCCEEEEEEEEECCCCCCEEECCCC
HETEFARKDAYLATNGETDDLSYNGALAAWWHATSQISTGVQYRYAHNKLGQPQTDNAII
CHHHHHHCCEEEEECCCCCCEECCCCEEEEEECCHHHHCCEEEEEHHHCCCCCCCCCEEE
YTVKYNF
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7559336; 9205837; 9278503 [H]