Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is yajG [C]
Identifier: 37680778
GI number: 37680778
Start: 2621780
End: 2622349
Strand: Direct
Name: yajG [C]
Synonym: VV2594
Alternate gene names: 37680778
Gene position: 2621780-2622349 (Clockwise)
Preceding gene: 37680776
Following gene: 37680779
Centisome position: 78.16
GC content: 44.91
Gene sequence:
>570_bases ATGAAAAAATTGGTTTTAGCTGCGTCTATCGCACTACTTTCTGCTTGTTCAGCCCCTCAACCAGAACAACTTAATCTTGC GCCAACCGCAACGTTGAGTACAAATCCAATGGTGCAGAACAAAACATACAGCATGACCAGTAAAGATGTACGTGCAGCGC AGTACGTAGCGCTGATTGACAGTGGCCGTTCGAACATCCTACCGCTACACGCTAAACAAAACATGCGCATTACGCTTGAA ACCTTGCTGCAGCAGCAGTTCGCGTCACAAGGCTACAAAGCGGATTTAAACAGTAACAACCTGATCAGCCTTGAAGTTCA AGAAGCATTGGTCAATGTAAAGCATTCCGTAATGGAAAACGAAATGGACGCGAAAGTGATTCTAGAAATCACCGCAGAGA CACCGAAAGGGAAACTGGTCAAAACATACAATGGCCGTGCGACTCGTAGTGGTATGCTCAGCGCTTCTGATCAAGAAGTG GAAAAAGTGCTAAATGATGTGATCACATTAGTCCTTGCTGAGATTGCCAATGACCAAGAACTGCAAAGCTACATGAAGGA ACGTTTCTAA
Upstream 100 bases:
>100_bases TTTTACAGGCAACTAAATAGCCTGCTAGTTTTAATTAAAGACAATCTTCACTTTAATATACGTTTACGTACAGCCTCTGC TGCTAGAAAAGGAATATACG
Downstream 100 bases:
>100_bases TGCTCAAAGTTATCTGTGCATCACTCGTACTCACGAGTAGCCTCGCCTTGGCGGGGCCAAAAGTTGAATTCGAAACCTCT CTGGGGAATTTCACTGTTGA
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MKKLVLAASIALLSACSAPQPEQLNLAPTATLSTNPMVQNKTYSMTSKDVRAAQYVALIDSGRSNILPLHAKQNMRITLE TLLQQQFASQGYKADLNSNNLISLEVQEALVNVKHSVMENEMDAKVILEITAETPKGKLVKTYNGRATRSGMLSASDQEV EKVLNDVITLVLAEIANDQELQSYMKERF
Sequences:
>Translated_189_residues MKKLVLAASIALLSACSAPQPEQLNLAPTATLSTNPMVQNKTYSMTSKDVRAAQYVALIDSGRSNILPLHAKQNMRITLE TLLQQQFASQGYKADLNSNNLISLEVQEALVNVKHSVMENEMDAKVILEITAETPKGKLVKTYNGRATRSGMLSASDQEV EKVLNDVITLVLAEIANDQELQSYMKERF >Mature_189_residues MKKLVLAASIALLSACSAPQPEQLNLAPTATLSTNPMVQNKTYSMTSKDVRAAQYVALIDSGRSNILPLHAKQNMRITLE TLLQQQFASQGYKADLNSNNLISLEVQEALVNVKHSVMENEMDAKVILEITAETPKGKLVKTYNGRATRSGMLSASDQEV EKVLNDVITLVLAEIANDQELQSYMKERF
Specific function: Unknown
COG id: COG3056
COG function: function code M; Uncharacterized lipoprotein
Gene ontology:
Cell location: Attached To The Membrane By A Lipid Anchor [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081739, Length=192, Percent_Identity=26.5625, Blast_Score=63, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20810; Mature: 20810
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLVLAASIALLSACSAPQPEQLNLAPTATLSTNPMVQNKTYSMTSKDVRAAQYVALID CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHEEE SGRSNILPLHAKQNMRITLETLLQQQFASQGYKADLNSNNLISLEVQEALVNVKHSVMEN CCCCCEEEEECCCCCEEHHHHHHHHHHHHCCCEECCCCCCEEEEEHHHHHHHHHHHHHHC EMDAKVILEITAETPKGKLVKTYNGRATRSGMLSASDQEVEKVLNDVITLVLAEIANDQE CCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHH LQSYMKERF HHHHHHHCC >Mature Secondary Structure MKKLVLAASIALLSACSAPQPEQLNLAPTATLSTNPMVQNKTYSMTSKDVRAAQYVALID CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHEEE SGRSNILPLHAKQNMRITLETLLQQQFASQGYKADLNSNNLISLEVQEALVNVKHSVMEN CCCCCEEEEECCCCCEEHHHHHHHHHHHHCCCEECCCCCCEEEEEHHHHHHHHHHHHHHC EMDAKVILEITAETPKGKLVKTYNGRATRSGMLSASDQEVEKVLNDVITLVLAEIANDQE CCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHH LQSYMKERF HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA